mRNA_F-serratus_M_contig9.20357.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: D8LAZ6_ECTSI (RNA exonuclease 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ6_ECTSI) HSP 1 Score: 298 bits (762), Expect = 9.810e-97 Identity = 146/206 (70.87%), Postives = 170/206 (82.52%), Query Frame = 1
Query: 7 GRRGVPARASAERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFSGKKRGRRAVVDQQ 624
G +G R +E+ + AAEKAQYV LDCEMVGVGP G RSALARCCLVDWDGD IYDK+V P ERVTD+RTFVSGV+A LK G+R R+CQ+EVA ILK+K LVGHAL NDLKAL M+HPP TRDTATYRP++K+HG AGGKL+P SLK L+ EHL R IQ GQH+PAEDA+ AM+LYKLAR EWEKSL+ +GK RGR++ VDQQ
Sbjct: 251 GVKGRGKRGGSEQALTAAEKAQYVALDCEMVGVGPGGCRSALARCCLVDWDGDTIYDKHVTPNERVTDFRTFVSGVKANHLKGGVRLRQCQEEVAAILKDKVLVGHALTNDLKALMMSHPPRSTRDTATYRPYQKAHGKAGGKLRPRSLKLLSQEHLDRPIQTGQHNPAEDAKAAMDLYKLARFEWEKSLSAAGKMRGRKSFVDQQ 456
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: W7U6T2_9STRA (RNA exonuclease 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6T2_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.300e-65 Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 1
Query: 46 DIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSL 576
D+ EK+ YVGLDCEMVGVG G RSALAR LVD+DG VIYD++V P ER+TD+RT+VSGV+AK LK + +EC +VA+++K K +VGHAL NDL+ L + HP M RDTA YR + +SHG GGKL+P LK LAL+ LG IQEG+H A+DAR AM LY+ R EWEK L
Sbjct: 93 DMTVMEKSLYVGLDCEMVGVGDGGKRSALARVTLVDFDGRVIYDEHVRPRERITDFRTWVSGVKAKHLKAALSLKECILQVADLVKGKIIVGHALKNDLQVLMLQHPVAMIRDTARYRAYMRSHGKEGGKLRPRRLKDLALDFLGMEIQEGKHDSADDARAAMLLYRAQRTEWEKEL 269
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A836CG98_9STRA (RNA exonuclease 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG98_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.030e-63 Identity = 112/190 (58.95%), Postives = 130/190 (68.42%), Query Frame = 1
Query: 70 QYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRG--IRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS--GKKRGRRAVVDQQA 627
QYV LDCEMVG G SG SALA+CC+ DW G+ +Y YV P ERVTD+RTFVSG+RA LK + ECQK VA I K + +VGHAL NDLKAL ++HP +M RDTATYRP+K+ + GKL P SLK LALE LGR IQ G+H PAEDA AM+L+KL EWE SL GKK G V Q A
Sbjct: 46 QYVALDCEMVGTGVSGRHSALAQCCITDWHGNTLYCSYVRPPERVTDFRTFVSGIRATHLKGADAVTLLECQKAVAAITKGRIIVGHALHNDLKALMLSHPKNMIRDTATYRPYKRPN--RAGKLAPRSLKHLALEFLGREIQGGEHSPAEDAIAAMDLFKLKWAEWETSLKQGRVGKKAGASKPVRQIA 233
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A1V9YXD8_9STRA (RNA exonuclease 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXD8_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.090e-60 Identity = 100/182 (54.95%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 40 ERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 585
++++ + + V +DCEMVGVG G+RS LARC +VD+DG+V+YDK+V P ERVTD+RT VSG+R+K L+ I F +CQ+EVAEI ++K LVGHAL ND++AL +THP M RDT YRP+ + + G KL P SLK LALE L +TIQ G+H EDART++ELYK A WEK++ S
Sbjct: 54 KKNVEWIDTSTIVAMDCEMVGVGSDGARSVLARCSIVDFDGNVVYDKHVKPMERVTDFRTHVSGIRSKHLRDAIPFTQCQQEVAEIFEDKILVGHALRNDMQALMLTHPKGMIRDTTKYRPYMRRK-VNGTKLFPKSLKNLALEVLKKTIQTGEHDSVEDARTSLELYKHAMAPWEKAIKAS 234
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A7S1YYA6_TRICV (RNA exonuclease 4 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYA6_TRICV) HSP 1 Score: 194 bits (494), Expect = 4.350e-59 Identity = 97/179 (54.19%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 49 IPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQ-EGQHHPA-EDARTAMELYKLARREWEKSLA 579
+P E+++YV +DCEMVG+G +G SALAR LVDWDG V+ D +V +RVTD+RT+VSGVR+KD++ + +C+++VAEILK K LVGH+L NDL AL + HP RDTA+YRP+ K G GGK++P L+ LA E+LG +IQ EG+ H + +DAR AMELYK AR WE+ +A
Sbjct: 61 VPEPERSRYVAVDCEMVGIGSAGRTSALARTSLVDWDGKVLLDTFVRVPDRVTDFRTWVSGVRSKDIRNAMEPEDCREKVAEILKGKVLVGHSLKNDLSALLLDHPRGDRRDTASYRPYMKPSGRGGGKMRPRRLRDLAEEYLGISIQGEGEEHSSIDDARAAMELYKFARTRWEREVA 239
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A6G0X6W8_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6W8_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.410e-57 Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = 1
Query: 61 EKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSL 576
+ ++ V +DCEMVGVG SG+RS LARC +VD+DG+V+YD++V P E+VTD+RT VSG+R+K L+ I F +CQ++V ILK+K LVGHAL NDL+AL +THP M RDT YRP+ + + G KL P +L+ LA E L +TIQ G+H EDART +ELYK A WEK+L
Sbjct: 72 DTSKIVAMDCEMVGVGLSGTRSVLARCSIVDFDGNVVYDEHVKPMEKVTDFRTHVSGIRSKSLRNAIPFPKCQQDVGAILKDKILVGHALRNDLQALMLTHPKPMIRDTTKYRPYMRRK-VNGTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKKAMVPWEKAL 242
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A024UI79_9STRA (RNA exonuclease 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI79_9STRA) HSP 1 Score: 192 bits (487), Expect = 5.710e-57 Identity = 96/170 (56.47%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 76 VGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 585
V +DCEMVGVG G+RS LARC +VD+DG+V+YD++V P E+VTD+RT VSG+R+K L++ I F +CQ +VA ILK+K LVGHA+ NDL+AL +THP M RDT YRP+ + + G KL P +L+ LALE LGRTIQ G+H DA+T ++LYK A WEK+L S
Sbjct: 89 VAMDCEMVGVGVGGTRSVLARCSIVDFDGNVVYDEHVKPLEKVTDFRTHVSGIRSKSLRKAIPFAKCQVDVAAILKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-VNGTKLLPKALRHLALEVLGRTIQGGEHDSVIDAQTTLDLYKHAMVPWEKALKAS 257
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: W4GFX5_9STRA (RNA exonuclease 4 n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFX5_9STRA) HSP 1 Score: 190 bits (482), Expect = 5.820e-56 Identity = 95/170 (55.88%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 76 VGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 585
V +DCEMVGVG G+RS LARC +VD++GDV+YD++V P E+VTDYRT VSG+R+K + I F +CQ +V ILK+K LVGHA+ NDL+AL +THP M RDT YRP+ + + G KL P +L+ LALE L +TIQ G+H DART +ELYK A WEK+L S
Sbjct: 107 VAMDCEMVGVGVGGTRSVLARCSIVDFNGDVVYDEHVKPLEKVTDYRTHVSGIRSKSFRNAISFAQCQVDVGAILKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-VNGTKLLPKALRHLALEVLDKTIQAGEHDSVIDARTTLELYKKAMVPWEKALKAS 275
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A485LPN0_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPN0_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.820e-55 Identity = 95/175 (54.29%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 61 EKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 585
+ A V +DCEMVGVG G+RS LARC +V +DG V+YD++V P E+VTD+RT VSG+R+K L+ I F +CQ +V E+LK+K LVGHA+ NDL+AL +THP M RDT YRP+ + + G KL P +L+ LA E L +TIQ G+H EDART +ELYK A WEK+L S
Sbjct: 89 DTALIVAMDCEMVGVGVGGTRSVLARCSIVGFDGTVLYDEHVKPLEKVTDFRTHVSGIRSKSLRNAIPFAKCQNDVGELLKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-MNGTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKRAMVPWEKALKAS 262
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A7S2HLT8_9STRA (RNA exonuclease 4 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLT8_9STRA) HSP 1 Score: 187 bits (476), Expect = 6.480e-55 Identity = 101/188 (53.72%), Postives = 124/188 (65.96%), Query Frame = 1
Query: 37 AERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEG--QHHPAEDARTAMELYKLARREWEKSLAFSGKK 594
A I EKA++V LDCEMVGVGP G +SALAR +V+WDGDVI+D +V E VTDYRTFVSGVR D++ G+ F EC++ V +IL+++ +VGHAL ND AL MTHP H RDTA Y F K L P LK LA + LG IQE +H EDA AMELYK ARR+WE ++ + KK
Sbjct: 147 AVEKITEEEKARFVALDCEMVGVGPHGEQSALARVSIVNWDGDVIFDTFVKVDEPVTDYRTFVSGVREADIEYGMDFDECRERVKDILEDRIIVGHALKNDFHALDMTHPWHQIRDTARYEHFMKKSKTCPEMLLPKKLKVLAKDKLGMLIQEEGKEHCSVEDATAAMELYKKARRKWELAVEWKMKK 334 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20357.1 >prot_F-serratus_M_contig9.20357.1 ID=prot_F-serratus_M_contig9.20357.1|Name=mRNA_F-serratus_M_contig9.20357.1|organism=Fucus serratus male|type=polypeptide|length=212bp VDGRRGVPARASAERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVback to top mRNA from alignment at F-serratus_M_contig9:631990..635538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20357.1 ID=mRNA_F-serratus_M_contig9.20357.1|Name=mRNA_F-serratus_M_contig9.20357.1|organism=Fucus serratus male|type=mRNA|length=3549bp|location=Sequence derived from alignment at F-serratus_M_contig9:631990..635538- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:631990..635538- >mRNA_F-serratus_M_contig9.20357.1 ID=mRNA_F-serratus_M_contig9.20357.1|Name=mRNA_F-serratus_M_contig9.20357.1|organism=Fucus serratus male|type=CDS|length=1272bp|location=Sequence derived from alignment at F-serratus_M_contig9:631990..635538- (Fucus serratus male)back to top |