mRNA_F-serratus_M_contig8881.20259.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI001A0A62D4 (Tandem-95 repeat protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A0A62D4) HSP 1 Score: 164 bits (414), Expect = 6.450e-43 Identity = 108/253 (42.69%), Postives = 160/253 (63.24%), Query Frame = 1
Query: 1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDV---LANDSDVDDGDSKTLSSVSVTSG-DGSVSIIDGQLLFDPGSDYDHLAS----------GETATVEV 717
Y+ATL+DGSALP+WL F+ TRTFSGTP N +VG + +TATD G + TD F L N ND P DL L N S++EN++NGT++G + D D GD+ +Y+L ++ADGRF +D + ++ VA G+LLD E ++H + VQ +DA G + + FT+ + D+NE PV ++DS + + A + + LANDSD + LS ++V +G +G+VS+ +G ++F P + +D AS ETATV V
Sbjct: 274 YTATLSDGSALPSWLTFNPETRTFSGTPANKNVGQIAIEITATDNDGEAATDIFNLEVINVNDIPLDLELSNISIDENSSNGTIIGNLSTLDPDVGDTHSYTLLNNADGRFILDGN--KLLVASGNLLDFEVNSTHLIEVQTTDAEGLSITKNFTLLLKDINEAPVPINDSVTANSSRAKIIPIASLLANDSDPE---GTPLSLMAVGNGINGTVSLDNGNVIFTPDTGFDGTASFEYTVSDGVLSETATVTV 521
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI00140D5474 (cadherin-like domain-containing protein n=1 Tax=Pseudomonas akapageensis TaxID=2609961 RepID=UPI00140D5474) HSP 1 Score: 160 bits (406), Expect = 2.010e-41 Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAV 504
Y+A LA GSALPAWL FDAATRTF+GTPD+ D+G +VRV ATD G + DF L N +AP D+ LD ASV+ENAA+GTV+GT + +D D GD T+ L DDA+GRF + Q+ V +GSLLDHE+A +H++ V+ +D+ G + D+T TI + +VNE P AV
Sbjct: 1695 YTAILAAGSALPAWLHFDAATRTFTGTPDDPDIGTINVRVVATDNAGAQASSDFALIVVNLPEAPADILLDVASVDENAASGTVIGTLSATDPDNGDEQTFQLLDDANGRFVL--VNNQLQVGNGSLLDHESAVAHNIQVRATDSTGLSFDKTLTIGINNVNEQPSAV 1860
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A1W9IZ14_9BACT (Uncharacterized protein n=1 Tax=Nitrospira sp. ST-bin5 TaxID=1978765 RepID=A0A1W9IZ14_9BACT) HSP 1 Score: 157 bits (396), Expect = 4.190e-40 Identity = 110/221 (49.77%), Postives = 139/221 (62.90%), Query Frame = 1
Query: 22 GSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGST--EETTALTLDVLANDSDVDDGDSKTLSSVSVTSG-------DGSVSIIDGQLL 657
G+A + D AT +S TP D GA VT TD G + T ++T NDAP DLAL +V ENAANGTVVGT G+DVD GD+ TY LTD A GRFAIDS+TGQ+TVA+ SLL++EAA SH VTV+V+D+ G T DETFTI + ++NE P AV S ST E + T+ +A+ +DVD GDS T +S G G V+++DG LL
Sbjct: 1919 GAATNGTASIDPATGLWSYTPTADWNGADSFTVTITDDAGNTATQVISVTVTPANDAPTDLALSANTVAENAANGTVVGTITGTDVDTGDTKTYGLTDTAGGRFAIDSTTGQLTVANASLLNYEAATSHTVTVRVTDSGGLTYDETFTINLTNINETPTAVTLSSSTVAENSANGTVVGMASTTDVDAGDSHTYQLMSNAGGRFAIDATTGVVTVVDGSLL 2139
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI0019E5C2A9 (Tandem-95 repeat protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019E5C2A9) HSP 1 Score: 155 bits (392), Expect = 1.490e-39 Identity = 104/253 (41.11%), Postives = 159/253 (62.85%), Query Frame = 1
Query: 1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDV---LANDSDVDDGDSKTLSSVSVTSGDGS-VSIIDGQLLFDPGSDYDHLAS----------GETATVEV 717
Y+ATL+DGSALP+WL F+ TRTFSGTP N+ VG + +TATD G D F + N ND P D+ L N S++EN++NGT++G + D DAGD+ +Y+L ++ADGRF +D + ++ VA G+LLD EA +++ + VQ +DA G + + FTI++ D+NE PV ++DS + ++A + + L+NDSD + LS ++V + S V++ +G ++F P + +D AS ETATV V
Sbjct: 4341 YTATLSDGSALPSWLTFNPETRTFSGTPVNEHVGQIAIEITATDNDGEVAQDIFEIEVINVNDIPLDIELSNISLDENSSNGTIIGILSTLDPDAGDTHSYTLLNNADGRFVLDGN--KLLVASGNLLDFEANSTYLIEVQTTDAEGLSITKNFTISLNDINEAPVLINDSLTANSSSAKVIAISYLLSNDSDPE---GTPLSLIAVGNATNSNVTLDNGNVIFTPDTGFDGTASFEYTVSDGVLSETATVTV 4588
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A0S4LHV3_9BACT (Uncharacterized protein n=2 Tax=Candidatus Nitrospira nitrificans TaxID=1742973 RepID=A0A0S4LHV3_9BACT) HSP 1 Score: 147 bits (371), Expect = 9.410e-37 Identity = 88/138 (63.77%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 100 GAFDVRVTATDPHGGSVTD-DFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDD 510
GA +R TD GG+ T+ D T+T NDAP DL+L +V EN+ANGTVVGT +G+D D GD+ TYS TD+A GRFAI+SSTGQITVADGSLL++EAA SH VTV+V+DA G T DETFTIAV +VNE PVA DD
Sbjct: 1160 GARTIRYVLTDGDGGTSTNYDTTVTVTAVNDAPTDLSLSANTVAENSANGTVVGTVSGTDADTGDTKTYSFTDNAGGRFAINSSTGQITVADGSLLNYEAATSHGVTVRVTDAGGLTYDETFTIAVTNVNEAPVAADD 1297
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A532F281_9BACT (Cadherin domain-containing protein (Fragment) n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532F281_9BACT) HSP 1 Score: 138 bits (347), Expect = 1.030e-36 Identity = 97/190 (51.05%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 160 FTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDVLAND--SDVDDGDSK--------------TLSSVSVTSGD--GSVSIIDGQLLFDPGSD 675
F ++ NDAP DL+L ++V ENAA GTVVGT +G+D+DA D+ TYSLTD A GRFAIDS+TGQ+TVADGSLL++EAA SH +TV+V+D+ G + DETFTI + +VNEGP D + + E T L AN SDVD GDS TLS V+VT+G I DG L+F P +D
Sbjct: 2 FKISVTPVNDAPTDLSLSASTVAENAATGTVVGTVSGTDIDASDTKTYSLTDTAGGRFAIDSATGQLTVADGSLLNYEAATSHTLTVRVTDSGGQSYDETFTINLTNVNEGPTGTDATLTLTEDTPQAL-TAANFGFSDVDAGDSLSAVRIDTLPTAGALTLSGVAVTAGQVIAVSDITDGNLIFTPTAD 190
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI001C4BB8ED (cadherin domain-containing protein n=1 Tax=Sphingobium lactosutens TaxID=522773 RepID=UPI001C4BB8ED) HSP 1 Score: 144 bits (364), Expect = 8.220e-36 Identity = 89/163 (54.60%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 7 ATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSV--TDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNE 489
ATL +G LPAWL FDA+ F GTP + GA +VR+ A+D G++ +D FTLT + NDAP DL + SV EN+ NGT+VG+ AGSD D+G+ L YSL DDA GRF ID+++G++ VADGSLLD EAAASH++ V+++DAA AT DE F I + DV E
Sbjct: 2602 ATLGNGDPLPAWLNFDASAGRFFGTPPLNFNGAIEVRLVASD---GALLASDSFTLTISPVNDAPFDLVMAGGSVAENSPNGTLVGSFAGSDPDSGEVLHYSLVDDAGGRFVIDAASGELRVADGSLLDFEAAASHNIIVRITDAAFATYDEAFVITITDVPE 2761
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A1W9GF15_9BACT (Uncharacterized protein (Fragment) n=2 Tax=Nitrospira TaxID=1234 RepID=A0A1W9GF15_9BACT) HSP 1 Score: 144 bits (364), Expect = 8.240e-36 Identity = 103/211 (48.82%), Postives = 132/211 (62.56%), Query Frame = 1
Query: 112 VRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDVLANDS--DVDDGDSKTLSSV-------SVTSGDGSVSIIDGQLLFDPGSDYDHLASGETATVEV 717
V V TD G + + FT+ N N+ P DLAL + +V ENAANGTVVGT +G+D DAGD+ TYS TD A GRFAI+SSTGQITVA+GSLLD+E AASH VTV+V+D+ G T DETFTI + DVNE P + S +T A+ V+ S D D GD+KT S ++ S G +++ + LL DY+ A+ T TV V
Sbjct: 2028 VTVRVTDSGGLTYDETFTINLTNVNETPTDLALSSNTVAENAANGTVVGTVSGTDPDAGDTKTYSFTDSAGGRFAINSSTGQITVANGSLLDYETAASHSVTVRVTDSGGLTYDETFTINLTDVNETPTDLALSSNTVAENAVNGTVVGTVSGTDPDAGDTKTYSFTDSAGGRFAINSSTGEITVANSSLL-----DYE-AATSHTVTVRV 2232
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A839ABH4_9HYPH (Cadherin domain-containing protein (Fragment) n=2 Tax=Stappia albiluteola TaxID=2758565 RepID=A0A839ABH4_9HYPH) HSP 1 Score: 144 bits (363), Expect = 9.870e-36 Identity = 101/214 (47.20%), Postives = 139/214 (64.95%), Query Frame = 1
Query: 22 GSALPAWLAFDAATR--TFSGTPDND---DVGA---FDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDS-GSTEETTALTLDVLANDSDVDDGDSKTLSSVSVTSGDGSVS 636
G A A D AT +F +PD D D GA ++V VTA+D +GG+ ++T + N+AP D+ L NASV EN+ NGTVVGT +D DAG+S TY+L D+A GRFAI + ++ VADG LLD E A SH VTV+V D+AG TR ETFT++V DVNE PVA DD+ + E+ ++ DVL ND+D + GD+ ++S++ + G +VS
Sbjct: 110 GGADGALFTIDGATGELSFIASPDFDAPGDAGADNVYEVEVTASDGNGGTSVQTISVTVGDVNEAPTDITLSNASVEENSTNGTVVGTLGAADPDAGESFTYTLLDNAGGRFAIVGN--ELRVADGGLLDFETATSHQVTVEVEDSAGNTRQETFTVSVTDVNEAPVATDDAVAAVEDGGSVPGDVLNNDTDPE-GDTLAVTSIAASRGPVAVS 320
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A525W892_9BACT (Tandem-95 repeat protein (Fragment) n=1 Tax=Nitrospira sp. CG24E TaxID=1985129 RepID=A0A525W892_9BACT) HSP 1 Score: 144 bits (362), Expect = 1.340e-35 Identity = 105/225 (46.67%), Postives = 137/225 (60.89%), Query Frame = 1
Query: 10 TLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGST--EETTALTLDVLANDSDVDDGDSKTLSSV-------SVTSGDGSVSIIDGQLL 657
T+ADGS L ++AAT + + V TD G + FT+ N N+ P DL+L SV ENA +GTVVGT G+D DAGD+ TYSLTD A GRFAI+S+TG ITVADGSLL++E AASH VTVQV+DAAG T +ETFTI + +VNEGP A+ +G+T E T TL A+ +D D GD+ T ++ S G +++ DG +L
Sbjct: 96 TVADGSMLN----YEAAT-------------SHSITVRTTDAGGLTHDQAFTINLTNVNEGPTDLSLSANSVAENALSGTVVGTITGTDPDAGDTKTYSLTDSAGGRFAINSTTGVITVADGSLLNYEQAASHPVTVQVTDAAGLTYNETFTINLSNVNEGPAAIGLTGNTVAENATNGTLVGTASTADPDAGDTPTYQLTDNAGGRFTINSATGQITVADGSML 303 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8881.20259.1 >prot_F-serratus_M_contig8881.20259.1 ID=prot_F-serratus_M_contig8881.20259.1|Name=mRNA_F-serratus_M_contig8881.20259.1|organism=Fucus serratus male|type=polypeptide|length=240bp YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVback to top mRNA from alignment at F-serratus_M_contig8881:3..722+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8881.20259.1 ID=mRNA_F-serratus_M_contig8881.20259.1|Name=mRNA_F-serratus_M_contig8881.20259.1|organism=Fucus serratus male|type=mRNA|length=720bp|location=Sequence derived from alignment at F-serratus_M_contig8881:3..722+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8881:3..722+ >mRNA_F-serratus_M_contig8881.20259.1 ID=mRNA_F-serratus_M_contig8881.20259.1|Name=mRNA_F-serratus_M_contig8881.20259.1|organism=Fucus serratus male|type=CDS|length=1440bp|location=Sequence derived from alignment at F-serratus_M_contig8881:3..722+ (Fucus serratus male)back to top |