mRNA_F-serratus_M_contig88.20182.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Match: D7FNU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU3_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.610e-109 Identity = 278/667 (41.68%), Postives = 395/667 (59.22%), Query Frame = 1
Query: 1 MSCITVP--KKWGGSTAP-RIET-MTPVVPVATAHKRLTKK------ARGSPQLVDTMREVVQAFELEFVQVRAAAVELKAVLDDRRTQLVDLRQHLEKESGDNGILEAVVQHRSSKNEFSDKRLAELEHEFCEILENDRIVAVRIAGLESDVGVFTDEYRRIQENTSVVLSQLTRAEAALEERERAFALGLREGERLSSELQETRRKLEDLQSKTEKAHEKASRMKSLASDAARDLKALEEQVALLRSDVDAKESDMSVVAFTAASTERKADETKGMIREDRAIHTQRLRDSQDRLVNIKRLVEDKENAHVELEGRIQALQLAVAAESEAQDTKRSEIEAMRTNLSSPNKQESVEVKMRDISAQIKVVEAEVAQREEAVTTASERMQEANKEFSNLMAAMSAAFCEYDQAVTSNRELTSETEKTASALSTLRERSQQDLIAMREVSNKLTASNEENRATAEADRKLAMALVETIHETQKTVDGMILELETRREMITTGRSRLEEGCARKRAQDEERAERMRAAKEAFAVAQQKLLHVRGQLEQRQSELVKFRQQAGDRICAPARLNEGDLQHAEEEARKTVEKIRA-NETKAHVAHLHSLKSTLATIREGGAARLKAEKDAARARVTALQNQKREVLQSIMELRDRFEAAQQTEKALEKEINNLRE 1968
MS ITVP K WG S A R+E+ + PV+P AT +R T K AR + LVD++REVVQAFELE+ Q RA +VELKAVLDD RTQL DLR+HLEKES +NG LEAVVQHR+++N D RL ELE F ++L ++ +A A LESD+ VFT E++RI++ T+ S L A+A L +RER A E +RL++ ++ RR + D + E+ASR ++LA +AA D KALE +VA LR D+ + ET I + +A + L+D+QDRL +K+ V KE A EL+ R++A Q A+ AE +E+V+ ++R +S Q+ +AE+ + EE+V AS+RM+ AN EFSNLMAA+S F EYD+AVT+NR+L + T SAL L E SQ DL+ + E ++L ASN E RA AEADR+ A L + ++QK VD + ++ ++ + RL+EG AR +A+ E + + + AA+ A A+ + R +LEQ Q+ ++ F Q+A PA L E D Q E+EA V++ RA ++H L L+ TL TI+EGGAA+LKA K+A AR+T+L++Q + +LR R EAA+ E AL ++ RE
Sbjct: 1 MSSITVPTTKTWGRSAASSRVESAVVPVMPAATPIQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAAFKQVLADEGHIASSAAALESDLVVFTAEHKRIRDKTATAASWLDLAQAGLLQRERTLAAAQSESDRLTAAVEAGRRAVADREGLLRGEQERASRSRALAGEAADDAKALESEVAGLRRDLARXXXXXXXXXXXXXXXXKHTAETTVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAGQEALVAERXXXXXX-----XXXXXXXXXXXKETVDAEVRLLSDQLATADAEIVKAEESVAQASDRMKRANAEFSNLMAALSLVFREYDKAVTANRQLELDATDTESALKALSEESQGDLLLLHEKRDRLRASNAELRAAAEADRRRAEELEILLCDSQKGVDEATASIAAKQVLVADTKKRLQEGEARLQAKKERKTQALHAAEGCVAAAEVQAQASRARLEQCQTAVIAFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKAAKEAKAARLTSLRDQVLHASHELADLRSRGEAAKNVEAALNLKLEARRE 662
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE) HSP 1 Score: 266 bits (681), Expect = 1.890e-71 Identity = 248/689 (35.99%), Postives = 352/689 (51.09%), Query Frame = 1
Query: 1 MSCITVPKK--WGGSTAPRIET-MTPVVPVATAHKRLTKK------ARGSPQLVDTMREVVQAFELEFVQVRAAAVELKAVLDDRRTQLVDLRQHLEKESGDNGILEAVVQHRSSKNEFSDKRLAELEHEFCEILENDRIVAVRIAGLESDVGVFTDEYRRIQENTSVVLSQLTRAEAALEERERAFALGLREGERLSSELQETRRKLEDLQSKTEKAHEKASRMKSLASDAARDLKALEEQVALLRSDVDAKESDMSVVAFTAASTERKADETKGMIREDRAIHTQRLRDSQDRLVNIKRLVEDKENAHVELEGRIQALQLAVAAESEAQDTKRSEIEAMRTNLSSPNKQESVEVKMRDISAQIKVVEAEVAQREEAVTTASERMQEANKEFSNLMAAMSAAFCEYDQAVTSNRELTSETEKTASALSTLRERSQQDLIAMREVSNKLTASNEENRATAEADRKLAMAL---VETIH-----------------ETQKTVDGMILELETRREMITTGRSRLEEGCARKRAQDEERAERMRAAKEAFAVAQQKLLHVRGQLEQRQSELVKFRQQAGDRICAPARLNEGDLQHAEEEARKTVEKIRA-NETKAHVAHLHSLKSTLATIREGGAARLKAEKDAARARVTALQNQKREVLQSIMELRDRFEAAQQTEKALEKEINNLREHAR 1977
MS ITVPK WG S+ R+E+ + PV+P AT +R T K AR + LVD+ RA +VELKAVLDD RTQL DLR+HLEKES +NG LEAVVQHR+++N D L ELE F ++L ++ +A R A LESD+ VFT E++ I+ T+ S L A+A L +RERA A E +RL++ ++ RR + D ++ E++SR ++LA +AA + KALE +VA LR D+ KE + T A+ ++ HT V KE A EL+ R+QA Q A+ AE Q KR+ N EFSNLMAA+S F EYD+AVT+NR+L + +T SAL L E S++DL+ + E ++L ASN E RAT EADR+ A L T H ++Q +D + ++ ++ R RL+EG AR +A+ E +A+ ++AAK A A+ + R +LEQ Q+ ++KF ++ PA L E D Q E+EA V++ RA ++H L L+ TL TI+EGGAA+LK K+A AR+T+L++Q + +LR R E A+ E AL ++ RE R
Sbjct: 1 MSSITVPKTKTWGISS--RVESAVVPVMPAATPIQRRTAKKSKISNARATVHLVDS--------------ARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNAAGDASLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKCIRNKTATAASWLDLAQAGLLQRERAIAEAQSESDRLTAAVEAGRRTVADREALLRGEQERSSRSRALAGEAADEAKALESEVAGLRRDLARKEEEGXXXXDTLAAIKK---------------HTAE--------------VATKERAKTELDERVQAAQEALVAERVDQKAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NAEFSNLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESERDLLLLHEKRDRLRASNAELRATVEADRRRAEELELIFGTTHSVVVVDDDGFLVVRGPGDSQNALDEATASIAAKQVLVADTRKRLQEGEARLQAKKERKAQALQAAKGGVAAAEVQAQASRARLEQCQASVIKFDRETAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKVAKEAKAARLTSLRDQVLHASHELADLRTRGETAKNMEAALNLKLEARREEQR 642 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig88.20182.1 >prot_F-serratus_M_contig88.20182.1 ID=prot_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=polypeptide|length=984bp MSCITVPKKWGGSTAPRIETMTPVVPVATAHKRLTKKARGSPQLVDTMREback to top mRNA from alignment at F-serratus_M_contig88:804806..812510- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig88.20182.1 ID=mRNA_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=mRNA|length=7705bp|location=Sequence derived from alignment at F-serratus_M_contig88:804806..812510- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig88:804806..812510- >mRNA_F-serratus_M_contig88.20182.1 ID=mRNA_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=CDS|length=5904bp|location=Sequence derived from alignment at F-serratus_M_contig88:804806..812510- (Fucus serratus male)back to top |