prot_F-serratus_M_contig88.20148.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig88.20148.1
Unique Nameprot_F-serratus_M_contig88.20148.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length921
Homology
BLAST of mRNA_F-serratus_M_contig88.20148.1 vs. uniprot
Match: A0A6H5J9X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.090e-72
Identity = 250/736 (33.97%), Postives = 328/736 (44.57%), Query Frame = 0
Query:  233 PLMGVGLTHLCQRVVVLLMRSPTCPNLVREETVPMKRRLYDQMSPLLARAKMGYEDLHTG----------------------PLQS---RANADSWRVTCGSREAVVPPIRMSIRDGVEGTETI--DQVEGETGPN-SVRPATAHGVRSIDDSG-WCPYLRIPRPGERIQVLQDSWSVIVSTCSDSASVTVAPFLGIQGPPYWGLTRLDCRGLFFDPRGWWRHAAASKGKPPPSSRWLHRQPRGFSAKGIPRGASSLNKPLGH----------------------LDETRCGAQGAPEKEP-EYACGWEPSARKFAPDHQDAAASSANTSFS--------CRANNVLEVFSAEGTWDPAFVLAPARLVGLQNRMTPRENGLRRAERIAWRCIDEPETAMAIRSMIPRCF------------PKELTTTGATNGRHSWSVPALDLR-----PSLGQDGM---RVSQPTPIPITRCHEGTLSTCYRLMPKSSVAPRSMGSLVTTKSSATVGCAWLELQREMGSLKADNRMM----SRGEEDTNDRSGESIQPRRVR------TLWTIALSE-------------AMPITSSFDGSVEPQAPGKTQPQALASSTTTERDSFDETALHD------SKRSGVTAAARVRESKVDELSKTATTITACTDGSLRAFSSSNQSP--MRDPRRRRRSTRLSSLSREGSGLNSAAMASPWKANASRPLEWFPVHSRQVFLLDPGFV 857
            P  G+GLT LC+R V+L  RSP CP LV  +T PM +R YDQM PLLARAK+ ++DLH                        P QS     + D  R   G   +VVP    S R      + +  D   G+ G   + + A +    S  D+G W   +R PR GER+QVL  +WSVIV+   ++  VTVAPF  IQ   Y G  R+D R L++DPRGWW H  A  G        LHRQ RG SA G+PRGA SLN+ L                        +D +R     AP  E    A   EPS         +AAA+ +N S +        C  NNV++VFSAEG+WDP FV+AP RLVGLQN+      G RRA ++AW  ID  E ++A R  +PRC             P++L  + +T+     S     LR     PS G D     R SQ   + +   +    S+C R  P +   P S               AWLELQREMGSLKADNRM+    SRG       SGE I    +       ++ T +L+E             A  +T + D    P +  K      A++T  E    D     D      S  S   A    R + +  +      ++   D S +        P       RRRR      +  +G+   ++A    WK NASRPLEWFPV  +QVFL+DP  V
Sbjct:  279 PPRGIGLTRLCRRAVILFTRSPACPELVAWKTSPMDQRAYDQMEPLLARAKLSHDDLHPTSVVAIGAIGTFPGFPIATLCSLPSQSFGGEVHGDHRRDGLGWG-SVVPSRHRSPRTPCFHLDPLPADDDSGDRGGVCATQQAASVDSSSPPDAGFWRANIRRPRSGERVQVLCGTWSVIVTVDPEAFLVTVAPFESIQSSAYRGDVRIDSRDLYYDPRGWWCHVPALAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVIVDSSRNYTGSAPVSENFSPAVSTEPSTANGLTASSNAAAAPSNLSPTPSVLRIHLCPKNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAALRMGGRRARQVAWYHIDGSEVSVAPRPTMPRCTSLTMPFRVGDTPPRQLQQSASTSSIPRLSSKHAHLRLAAVVPSHGGDNSVYARFSQSRGLSVPSINT---SSCSR--PAAEKVPTSADE------------AWLELQREMGSLKADNRMLVRDSSRGGXXXXXXSGECINTSTISASSPAMSVVTKSLAENSTVGAQATTNMLAKTLTRTLDS---PLSAWKGGNPVSATATVFELTQVDGRPEKDAGEGASSPSSASLAHETTRSTDIWRVDNQQQEVSPPEDCSKQVRMGEGDKPDATASSHRRRR------IPDDGNSTAASATTRKWKPNASRPLEWFPVPGKQVFLVDPNDV 987          
BLAST of mRNA_F-serratus_M_contig88.20148.1 vs. uniprot
Match: D7FNU7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU7_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 7.380e-66
Identity = 232/708 (32.77%), Postives = 314/708 (44.35%), Query Frame = 0
Query:  245 RVVVLLMRSPTCPNLVREETVPMKRRLYDQMSPLLARAKMGYEDLHTGPLQ--SRANADSWRVTCGSREAVVPPIRMSIRDGVEGTETI--DQVEGETGP-NSVRPATAHGVRSIDDSG-WCPYLRIPRPGERIQVLQDSWSVIVSTCSDSASVTVAPFLGIQGPPYWGLTRLDCRGLFFDPRGWWRHAAASKGKPPPSSRWLHRQPRGFSAKGIPRGASSLNKPL--GHLDETRCGAQGAP---------EKEPEYACGWEPSARKFAPDHQDAAASSANTSFS-------------------------------------CRANNVLEVFSAEGTWDPAFVLAPARLVGLQNRMTPRENGLRRAERIAWRCIDEPETAMAIRSMIPRCFPKELT-TTGATNGRHSWSVPALDLRPSLG--QDGMRVSQPTPIPITRCHEGTLSTCYRLMPKSSVAPRSMG----SLVTTKSSATVGC-AWLELQREMGSLKADNRMMSRGEEDTNDRSGESIQPRRVRTLWTIALSEAMPITSSFDGSVEPQAPGKTQPQALASSTTTERDSFDETALHDSKRS----GVTAAARVRESKVDEL-------------SKTATTITACTDGSLRAFSSSNQSP-MRDPRRRRRSTRLSSLSREGSGLNS---------------AAMASPWKANASRPLEWFPVHSRQVFLLDPGFV 857
            R V+L  RSP CP LV  +T PM +  YDQM PLLARAK+ ++DLH   +      + D  R   G   +VVP    S R      + +  D   G+ G  ++ + A +     + D+G W   +R PR GER+QVL D+WSVIV+   ++  VTVAPF GIQ   Y G  R+D R L++DPRGWW H  A  G        LHRQ RG SA G+PRGA SLN+ L  G  DE      G P         +    Y     PSA +       +AA+  + S S                                     C  NNV++VFSAEG+WDP FV+AP RLVGLQN+   R  G RRA ++AW  ID PE ++A R  +PRC    +    G T  RH     +    P L   Q  +R++   P      H G  S   R      ++  S+     S+   K   T    AWLELQREMGSLKADNRM+ R        S +         + T  +S + P  S    S+   +        + +  TT+  +   T   DS  S    G T +A     ++ ++             S T+ ++T  T  S   +   NQ   +  P    +  R++   +  +  +S               +A    WK NA RPLEWFPV  RQVF +DP  V
Sbjct:  217 RAVILFTRSPACPELVAWQTSPMDQPAYDQMEPLLARAKLSHDDLHPTSVSFGGEVDGDHRRDGLGGG-SVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVHATQLADSVDSLPLPDAGFWRASIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYRGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGKGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSQPASSAAAPVSKSLSPAVSTEPSXXXXXXXXXXXXXXXXXXXXXXSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLRMPFRVGDTPSRHLQQSASTSSVPRLSSKQAPLRLAAVAP-----SHGGGNSVYARFSQSRGLSVPSINTNSCSMPAAKKLPTAADEAWLELQREMGSLKADNRMLIRD-------SSQGXXXXXXECINTSTISASSPAMSVVTKSLAENS-------TVGAQATTDMLAKTLTRTLDSPLSAWKGGNTVSATATVFELTQVGGRPEKDAGECASSPTSVSLTHETTRSTDNWRVDNQQQEVSPPEECSKQVRVAEGDKPDTAASSHRXXXXPXXXNSTAASATTRKWKPNAFRPLEWFPVPGRQVFRVDPNDV 904          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9X4_9PHAE8.090e-7233.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNU7_ECTSI7.380e-6632.77Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:237740..243114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20148.1mRNA_F-serratus_M_contig88.20148.1Fucus serratus malemRNAF-serratus_M_contig88 236865..243597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig88.20148.1 ID=prot_F-serratus_M_contig88.20148.1|Name=mRNA_F-serratus_M_contig88.20148.1|organism=Fucus serratus male|type=polypeptide|length=921bp
MWSSTFTRRGNSSRQDWSEPLPRSHVDILRSLPLRLRLDVTVLLTVRVAF
RHSLPQQVLAEAFMILLAPYRGTPDRVHIDLSRIPPFVCTALVHILRSSV
LEDRSQVHESRSGSTADLHVLDEREKGLLDALPPVLTGIDNVLEEWNSRE
SMPSGGKPDKDPKGDAQLPRASRNGDPSAIKMKPRSPPPSSNGDNSCKNV
VTVTQYPENTTTDTPKAPGTISESTLRSAVYTPLMGVGLTHLCQRVVVLL
MRSPTCPNLVREETVPMKRRLYDQMSPLLARAKMGYEDLHTGPLQSRANA
DSWRVTCGSREAVVPPIRMSIRDGVEGTETIDQVEGETGPNSVRPATAHG
VRSIDDSGWCPYLRIPRPGERIQVLQDSWSVIVSTCSDSASVTVAPFLGI
QGPPYWGLTRLDCRGLFFDPRGWWRHAAASKGKPPPSSRWLHRQPRGFSA
KGIPRGASSLNKPLGHLDETRCGAQGAPEKEPEYACGWEPSARKFAPDHQ
DAAASSANTSFSCRANNVLEVFSAEGTWDPAFVLAPARLVGLQNRMTPRE
NGLRRAERIAWRCIDEPETAMAIRSMIPRCFPKELTTTGATNGRHSWSVP
ALDLRPSLGQDGMRVSQPTPIPITRCHEGTLSTCYRLMPKSSVAPRSMGS
LVTTKSSATVGCAWLELQREMGSLKADNRMMSRGEEDTNDRSGESIQPRR
VRTLWTIALSEAMPITSSFDGSVEPQAPGKTQPQALASSTTTERDSFDET
ALHDSKRSGVTAAARVRESKVDELSKTATTITACTDGSLRAFSSSNQSPM
RDPRRRRRSTRLSSLSREGSGLNSAAMASPWKANASRPLEWFPVHSRQVF
LLDPGFVTTTATKHQQIWSRSSRRVVDSDATPRAQKKEVTAGRSGCGTSL
VVKSVSLADVIKRGKLRVES*
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