prot_F-serratus_M_contig872.20089.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig872.20089.1
Unique Nameprot_F-serratus_M_contig872.20089.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length655
Homology
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 910 bits (2351), Expect = 0.000e+0
Identity = 471/655 (71.91%), Postives = 514/655 (78.47%), Query Frame = 0
Query:    1 RPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRSVVQSTLGPASEAVPDFTSSTYFGGEAERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGTVRTSNWETDLSKEQVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDVAGVTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGATYGSFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXXXAIMAHYTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG 655
            RPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGD +++QSTLGPAS+ VPDF  STYF  EAER LP+LEFPA  SPILVRV SENCE  +RIC  LL+RAR S PAVLG DIEWSVRPS PRRQV+L+QLSARDGYTVLFHLK++ERR GI+P ALKELLVNDT+QLAGVSVRGDL H+ NSYGV  T PVD+GQLAG HL VK GARSLQALTA LL RRLAK  VRTSNWET L+K+Q KYAGLDSYAGVL+FY IWARMDPI TE RPDVLSLP NT LRLYTSTN+RCVAEGT+ +Y Q  TWGSTGLTIG VTGGATRMV++LT +H+PGAF LHP E GGQVQALDELELG LVLW+AINSRLP D        +VG G+ AG T TSS ST     QV GSAS+ G  G G                           AMD VR VWK R PSW++QEIA+DMRAK +SHLLKHVPRIVP P+ILLPR+DN++ETFK VRD  TG+TL+TDRMHKA  LLR HIEKGCL DPNPDLV L +ITGRTKDGL+LIR                         A+MAH+TMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDD PLYPG
Sbjct:    3 RPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQEKYAGLDSYAGVLLFYRIWARMDPILTECRPDVLSLPANTHLRLYTSTNTRCVAEGTVEEYSQDGTWGSTGLTIGHVTGGATRMVVRLTVKHVPGAFVLHPGEGGGQVQALDELELGALVLWDAINSRLPTDAD------IVGGGN-AGTTATSSASTPGLEEQVGGSASSSGVAGCGXXXXXXXXXXXXXXXXXXXXXXXXPSSAMDDVRSVWKLRNPSWNDQEIASDMRAKYASHLLKHVPRIVPSPDILLPRFDNLVETFKNVRD-VTGETLFTDRMHKATKLLRTHIEKGCLHDPNPDLVTLFEITGRTKDGLNLIRSIKGTNRIENFHQLLRLLMGSYHASALMAHFTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDEPLYPG 649          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 2.640e-60
Identity = 108/163 (66.26%), Postives = 133/163 (81.60%), Query Frame = 0
Query:  223 ALTATLLRRRLAKGTVRTSNWETDLSKEQVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPG 385
            ALTA LLRRRL KG VRTSNWET L+KEQ+ YAGLDSYAGVL++YH+++RMDP++TE RPDVLSLP +T LRLYT TN+RCV EGTL  Y +  TWG+TGL IGR  GG TRMV++LT ++IPGA  L+P  DGG+ QAL+ELELG L+LW+A++   P+ PG
Sbjct:  422 ALTAGLLRRRLPKGQVRTSNWETSLTKEQITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGE-QTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALEELELGTLMLWDAVHMCSPSFPG 583          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A0G4J1F9_PLABS (3'-5' exonuclease domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J1F9_PLABS)

HSP 1 Score: 98.2 bits (243), Expect = 2.280e-17
Identity = 154/634 (24.29%), Postives = 235/634 (37.07%), Query Frame = 0
Query:   35 VYWTDLCCGDRSVVQSTLGPASEAVPDFTSSTYFGGEAERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRAREST-PAVLGIDIEWSVRPSEPRRQVSLLQLSARDGYTV-LFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQ--------STNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTSNWETD-LSKEQVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGST-----WGSTGLTIGRVT------GGATRMVIKLTARHIPGA-FTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDVAGVTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGATYGSFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXXXAIMAHYTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITK 644
            V +TD CC D+S+++       E  P F            S+P    P    P   RV S   E    +    + +A++S  P   G+D EW+    + R +V+ LQ++     TV +FHL    +RP    + LK  L   TV  AG S+  D K++   Y +         S + V++  +A T L       SL  L   +L R L K   +R S W  D LS +QV+YA LD+YAG++++  + A+ DP       D        P  L        +A  T+    + ST     W  T +T  R+         A+   I      +P     L P      V   +   L   ++   +  +   +P            DV  +          P                          Y  +  AL DAF I D   +++V    ++R       E     +     + L+ V R +P P +L  R   V + F  + D   G  L+ ++ HK    L  HI+KGC SDP+ +  P  Q  G  KDGL + R                           +    ML H  R N R A  +R     ++G++  W V+ I    K
Sbjct:  553 VVFTDKCCEDQSLIK-------ECFPYFAD--------HESVPRAAHPTLTLPRRARVISHE-EPANAVASTWMDKAQQSRRPFAAGVDCEWTSSAGQ-RTKVATLQVAVEGEDTVYIFHLSQMRKRP----RMLKRFLECPTVIKAGRSIGIDKKYLAEDYQLVVESHDEALSNSWVELAAMA-TRLEAAPPRSSLAKLVENVLARNLPKPQHIRCSQWTADKLSDDQVEYAALDAYAGLMVYLRLAAKPDPSVRLAAMDSPQAEAGAPTPL-PGMPVELLAGHTVAAMGKISTCHMQFWEKTKVTKSRIVIVVEKLSSASLNPISQIKEILPQTEVALPPTAIVVIVSKFNRCRLCATLITFTVPEKRYDEPVRCCLQ------DVFHLMKRIKVKKAHP-------------------------FYSPYVIALSDAFFIWDSSDLNKVADSLRKRG------EDPVHWKIFRRDYFLRRVRRRIPVPSVLRARILAVCDYFSKLLDH-NGVPLFDEKCHKDLENLLEHIDKGCCSDPDGEGYPFYQEIGVDKDGLVIYRCSRGTNCCESNHRVLKKKFGSMNAGIALTEALMLQHVLRTNIRAAEKNRP-GHYIIGHFKPWLVDLINFFGK 1124          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A5C3NET4_9AGAM (3'-5' exonuclease domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NET4_9AGAM)

HSP 1 Score: 97.1 bits (240), Expect = 5.420e-17
Identity = 163/635 (25.67%), Postives = 246/635 (38.74%), Query Frame = 0
Query:   13 EIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRSVVQSTLGPASEAVP---DFTSSTYFGGEAERSLPSLEFPAHV--SPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGI-MPKALKELLVNDTVQLAGVSVRGDLKHILNSY----GVQST--NPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKG-TVRTS-NWETD-LSKEQVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTL-VDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLW-----------NAINSRLPADPGPVSSLGVV----------------------------------GAGDVA------GVTGTSSTSTLEPGGQVEGSASALGTTGVGGV--------TSAAGATYGSFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSH---LLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDPNPDLVPLLQITGRTKDGL 568
            +  P L A++      G  P+++ +TD   GD++ ++  +    E V    DFT           +LP L  P+    + +L  V   N    T     ++          + +D+EWSV   S  R +V+++ + A DG  +L  L+   R   + +P  L   L   +V   GV +  D KH+  S     GV       V++G LA  H        SL  L A  +R  L K   +R S +W+ D +S  Q +YA LD+YAG  +F  +  R         P   + P  TP+ L +S  S  VA+G + +D P        G+ +        R++I +T+  +PG          G+     E       L            N   +R  + P P SS   V                                  GA D A        + T   + L+P G  +   S L T  +G V         S        F  ALRDA  IPDP+    + R  ++R  +W          A L  H   L + V RIVP PEILLPR  +V++ F  ++D  TG  L+ D+       +  +I +G  SDP    + L    G+ K GL
Sbjct:  615 QFMPALGAISRLLKMYGHDPVELAFTDNVRGDKAALEEVIPSLREGVTPVKDFT-----------TLPKLSVPSDEWNAVLLSSVYQINTRFNT-----IMADLAADAKLYVSLDMEWSVDTASGLRGRVAVISV-AYDGVILLVWLRCCLRNGCLNLPTGLLAFLRAPSVIKVGVKITADFKHLFASCDFREGVDDPFRGAVNLGALAKAHNPSIKATISLADLVAVYVRHHLPKDEAIRVSTDWDNDEMSHAQQEYAALDAYAGWAVFQALGQR-----ESGGPVTATTPGATPVTLMSSDRSTAVAQGHIALDRPSKHD----GINVS-----PKRVLIVVTSVLVPGHLVPKELLSSGKDTPFSEFPAPPFKLLCKERHLRTRAANEAVTRPISPPTPASSAETVYLDPSTLPAAEPDTENEPDYLERDTDWDLMTEDPGAKDQAVESSDRDPSATVKAAALDPDGLSDAWES-LSTRVLGDVFHLMHEFKISVHHGLRRPFARALRDALFIPDPDDKVIIERFLEERQTTWD---------AMLLYHPCWLFRRVKRIVPPPEILLPRVRDVLQKFGPLKDSTTGQPLFNDKAWDICTNVLENIRRGYYSDPPG--IQLYFTRGQDKYGL 1206          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A3P3Y2D1_PLABS (3'-5' exonuclease domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2D1_PLABS)

HSP 1 Score: 89.4 bits (220), Expect = 1.480e-14
Identity = 132/549 (24.04%), Postives = 215/549 (39.16%), Query Frame = 0
Query:   22 ANRYLTQGFRPIQVYWTDLCCGDRSVVQSTLGPASEAVPDFTSSTYFGGE--AERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-------RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWETDLSKEQVKYAGLDSYAGVLIFYHIWARMD---PI-FTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGATYGSFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDP 550
            A R L +  R  Q    D      S V +  G   + V   + S    G   A+ ++PS  +P     +L    SE  +    +   LL  A +    V+G D EW V       R    R +V  +Q++  +G   L  +    ++   +P+A+  LL +  +   G  ++ D   +L  +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS+ Q++YA  D++AG+ ++++     D   PI  T+  P    L V+  +      NS+ VA GT+V+    S           VT     +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                            +F AA+RDA  + DPE  D VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T D L T+   K    +RVH+ KGCLSDP
Sbjct:  740 AQRILEESSRSSQT--VDFAAAVASFVSAVTGATDQLVSLRSISARQRGRDLADSAVPSFSWPPSDGRVL-STPSEINDVVDAVYRTLLSEAPDKR--VIGYDQEWDVVMTRLGGRFVSSRSRVRTIQIAMSNGEMYLVRVTDAMKQ---LPRAVVTLLADARIAKVGRQIQHDAAKLLKDFGVHLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVSLEKPPHIRVSEHWSGPLSRAQIRYANRDAFAGLALYHYFTQFQDCSTPIPLTDAAP---GLRVDIVIG-----NSKRVASGTIVENSGTSR---------DVTASQHVLLVEVDELSAPG-LRIATRNGLPSFQTIKELPVRLPVRLQSIRRARQCLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKDMVRRKLEEAG------QLPDDFEAFIHNSRWARSRIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNDPLLTEAGLKKIEAMRVHVRKGCLSDP 1228          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A3P3YF60_PLABS (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YF60_PLABS)

HSP 1 Score: 89.4 bits (220), Expect = 1.550e-14
Identity = 132/549 (24.04%), Postives = 215/549 (39.16%), Query Frame = 0
Query:   22 ANRYLTQGFRPIQVYWTDLCCGDRSVVQSTLGPASEAVPDFTSSTYFGGE--AERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-------RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWETDLSKEQVKYAGLDSYAGVLIFYHIWARMD---PI-FTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGATYGSFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDP 550
            A R L +  R  Q    D      S V +  G   + V   + S    G   A+ ++PS  +P     +L    SE  +    +   LL  A +    V+G D EW V       R    R +V  +Q++  +G   L  +    ++   +P+A+  LL +  +   G  ++ D   +L  +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS+ Q++YA  D++AG+ ++++     D   PI  T+  P    L V+  +      NS+ VA GT+V+    S           VT     +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                            +F AA+RDA  + DPE  D VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T D L T+   K    +RVH+ KGCLSDP
Sbjct: 1697 AQRILEESSRSSQT--VDFAAAVASFVSAVTGATDQLVSLRSISARQRGRDLADSAVPSFSWPPSDGRVL-STPSEINDVVDAVYRTLLSEAPDKR--VIGYDQEWDVVMTRLGGRFVSSRSRVRTIQIAMSNGEMYLVRVTDAMKQ---LPRAVVTLLADARIAKVGRQIQHDAAKLLKDFGVHLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVSLEKPPHIRVSEHWSGPLSRAQIRYANRDAFAGLALYHYFTQFQDCSTPIPLTDAAP---GLRVDIVIG-----NSKRVASGTIVENSGTSR---------DVTASQHVLLVEVDELSAPG-LRIATRNGLPSFQTIKELPVRLPVRLQSIRRARQCLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKDMVRRKLEEAG------QLPDDFEAFIHNSRWARSRIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNDPLLTEAGLKKIEAMRVHVRKGCLSDP 2185          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 4.170e-13
Identity = 56/168 (33.33%), Postives = 76/168 (45.24%), Query Frame = 0
Query:  487 SHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXXXAIMAHYTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYP 654
            S  L+   R+VPR ++LL R+D VIE F    D  +G+ L   +  KA   LR HIE  CLSDP  D + +    G+ K GL   R                           +A   +L  NYR N RM   +RG+   L G+Y+ + VE IQ  T  W    P++P
Sbjct:  568 SFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDP--DGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFP 733          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A4V1Q2V2_9AGAR (3'-5' exonuclease domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4V1Q2V2_9AGAR)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-12
Identity = 148/602 (24.58%), Postives = 238/602 (39.53%), Query Frame = 0
Query:  118 VLGIDIEWSVRPSEPRR-----QVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNP----VDVGQLAGTHLGVK-IGARSLQALTATLLRRRLAKGTVRTSN--WETD-LSKEQVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTG-------------------------GATRMVIKLTAR-----HIP-----GAFTLHPREDGGQVQALDELELGDLVL---WNAI---NSRLPADPGPVSSLGVVGA--GDVAGVTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGAT----------------YG---SFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDPNPDLVPLLQITGRTKD-GLDLIRXXXXXXXXXXXXXXXXXXXXXXXXXAIMAHYTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAIT 643
            V+G D EW+V  S   R     + +++QL+ +    +L     D    G +P  LK  L +  +   G  V  DLK +  + G  ST P    VD+ ++A  H  +  I   +L  L A +L +R+ K      +  WE++ L+  Q+KYA +D+YA + I+Y I     P   +  P     P  TP+ LY++  SR +A G +  +   S++   G+ +  +T                          GAT   + ++       H P       + L  ++   Q    +  ++G  +L   ++AI   +S    D G   S G +G+  GD+  + G       +     EG A  LG   V   T                      +G   +FC ALRDA  + DPE + R+      + P  S +    D+       + KH  R++P PEIL PR   V ETF  ++D  TG  L+     K +  +   I  G +SDP    VPL  I G  +D GL +                           +I      L+    R++   G++        G++S W   +IQ +T
Sbjct:  166 VVGFDSEWNVEESANGRLRRGGKTAIVQLAYKKQVYILQIA--DIIAEGSLPAQLKAFLADCRILKVGRLVNSDLKRLEQACG--STTPFGGGVDLAKVAKDHCVLSSIKTATLGDLCAIVLNKRINKNVPERLSELWESEILTPRQLKYAAIDAYASLCIYYGISKFGVP---QSFPMSSLPPPATPVLLYSADKSRIIAIGQISLHSLASSFD--GIKLSPLTAVIDIFHVMLPGAKLATHRKRCLQDFGATPFTVVVSKSLLRIYHQPLSSTQNVYALPLKDRSPQSLPPEPTQMGAGLLPSEYSAIGVSHSADNVDGGAPFSSGQLGSSVGDI--ILGNIDECAEDHQSATEG-AEILGDRPVEWRTEVRSRVLKDVFHVFNMFYLSVKHGLRVAFCHALRDAIFLADPEDVRRISAWGMIQKPPQSFR----DLTTYRPKWVWKHCKRVIPPPEILYPRVRKVFETFGSLKDATTGLPLFDTNSWKISRNILDLIYHGHISDPPG--VPLYAIKGLDQDTGLPVYHCFRGTNRTEGGVHTHLRPHLPSSGTSIRHAQACLMDFVLRHNLTVGIYNRTGKRYRGHFSIWVTNEIQELT 749          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: UPI001568D0F9 (exonuclease 3'-5' domain-containing protein 2 n=2 Tax=Maniola TaxID=111919 RepID=UPI001568D0F9)

HSP 1 Score: 76.6 bits (187), Expect = 6.560e-11
Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 0
Query:  119 LGIDIEWSVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNPVDVGQLAGTHL-GVKIGARSLQALTATLLRRRLAKG-TVRTSNWETD-LSKEQVKYAGLDSYAGVLIF 266
            +G D EW V     R+ V+LLQLS  DGY  LF L   +     +PKAL++LL ++T+   GV+ + D +++   YGV     +DV  L   HL G + G   L +L+ +LL   L K   +R S+WE + LS+ Q+ YA  D++  + IF
Sbjct:   69 IGFDCEW-VTEQGRRQPVALLQLSTFDGYCALFRLNQIKT----IPKALQDLLQDETIYKVGVAPKDDARYLSQDYGVYMEGTLDVRHLV--HLCGYESGG--LASLSKSLLGIVLDKTWRIRCSDWEAEQLSERQINYAAADAHVAIRIF 210          
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Match: A0A367KBH8_RHIAZ (3'-5' exonuclease domain-containing protein n=3 Tax=Rhizopus TaxID=4842 RepID=A0A367KBH8_RHIAZ)

HSP 1 Score: 74.7 bits (182), Expect = 8.130e-11
Identity = 58/202 (28.71%), Postives = 97/202 (48.02%), Query Frame = 0
Query:   74 RSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEW--SVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTNPVDVGQLAGTHL---GVKIGARSLQALTATLLRRRLAKGTVRTSNWET-DLSKEQVKYAGLDSYAGVLIFYHI 269
            + LP L +P H      +V   N E   ++   L +  +     V G+D EW  +    +P +++SL+Q+ + +   ++        R    PK L+    +  +   GV++R D   +   +G+++   V++   A         K   RSL+ALTA  L+RR+AKG VR SNW    L+ +Q+ YA LD+YA   I+  I
Sbjct:   75 QDLPQLTYPKHY-----KVECINTED--KVNTTLREFLKSQQGDVFGVDFEWPPTFIKGQPEKKISLVQICSSNAILLV-----QTTRMKSFPKELQRFFEDRDLLKTGVNIRMDGLKLHRDFGIKTNGLVELMSFANASKLPEVKKYHMRSLRALTAFFLKRRMAKGDVRISNWAVRSLTPKQISYAALDAYASYQIYQAI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig872.20089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0J2_ECTSI0.000e+071.913'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSD7_9PHAE2.640e-6066.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0G4J1F9_PLABS2.280e-1724.293'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A5C3NET4_9AGAM5.420e-1725.673'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A3P3Y2D1_PLABS1.480e-1424.043'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A3P3YF60_PLABS1.550e-1424.04DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A6H5JRJ6_9PHAE4.170e-1333.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A4V1Q2V2_9AGAR1.190e-1224.583'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI001568D0F96.560e-1137.09exonuclease 3'-5' domain-containing protein 2 n=2 ... [more]
A0A367KBH8_RHIAZ8.130e-1128.713'-5' exonuclease domain-containing protein n=3 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 112..272
e-value: 2.7E-11
score: 43.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 72..276
e-value: 7.5E-35
score: 121.8
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 82..356
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 113..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig872contigF-serratus_M_contig872:80853..84005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig872.20089.1mRNA_F-serratus_M_contig872.20089.1Fucus serratus malemRNAF-serratus_M_contig872 80853..84005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig872.20089.1 ID=prot_F-serratus_M_contig872.20089.1|Name=mRNA_F-serratus_M_contig872.20089.1|organism=Fucus serratus male|type=polypeptide|length=655bp
RPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRSVVQS
TLGPASEAVPDFTSSTYFGGEAERSLPSLEFPAHVSPILVRVTSENCEHC
TRICFGLLKRARESTPAVLGIDIEWSVRPSEPRRQVSLLQLSARDGYTVL
FHLKHDERRPGIMPKALKELLVNDTVQLAGVSVRGDLKHILNSYGVQSTN
PVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGTVRTSNWETDLSKE
QVKYAGLDSYAGVLIFYHIWARMDPIFTERRPDVLSLPVNTPLRLYTSTN
SRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTL
HPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDVAG
VTGTSSTSTLEPGGQVEGSASALGTTGVGGVTSAAGATYGSFCAALRDAF
TIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRP
EILLPRYDNVIETFKVVRDGATGDTLYTDRMHKAAALLRVHIEKGCLSDP
NPDLVPLLQITGRTKDGLDLIRSLKGTNRVENYHQLLRQLMGSYRASAIM
AHYTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDV
PLYPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf