prot_F-serratus_M_contig848.19863.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig848.19863.1
Unique Nameprot_F-serratus_M_contig848.19863.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length517
Homology
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BLAST of mRNA_F-serratus_M_contig848.19863.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.190e-14
Identity = 50/100 (50.00%), Postives = 57/100 (57.00%), Query Frame = 0 
Query:  402 SRCGVCGRLSKLGCSSGNCIECCIKSGLPCEAHAKQVERKQREHELL-----------------------AMP----DEGPCEDVARLPKGVFKEVSFHA 474
            SRCG+CGR +KLGCSS +C ECC+KSG PCEAHAKQVERK RE ELL                        +P    D+G     ARLP G FKE +F A
Sbjct:  373 SRCGLCGRKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPR-ARLPPGAFKEAAFQA 471
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BLAST of mRNA_F-serratus_M_contig848.19863.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.550e-12
Identity = 50/107 (46.73%), Postives = 56/107 (52.34%), Query Frame = 0 
Query:  402 SRCGVCGRLSKLG-------CSSGNCIECCIKSGLPCEAHAKQVERKQREHELL-------------------------AMP----DEGPCEDVARLPKGVFKEVSF 472
            SRCG+CGR SKLG       CSS +C ECC+KSG PCEAHAKQVERK RE ELL                          +P    D+G     ARLP G FKE +F
Sbjct:  619 SRCGLCGRKSKLGQLLEGAGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPR-ARLPPGAFKEAAF 724
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BLAST of mRNA_F-serratus_M_contig848.19863.1 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.360e-11
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:  403 RCGVCG-RLSKLGCSSGNCIECCIKSGLPCEAHAKQVERKQREHELL-AMPDEGPCEDVARLPKGVFKEVSFHA 474
            RC +C  RL + GC++G+C++CC KS LPC AHAKQ++RK+ E ELL A P +    +  R  K +FKE SFHA
Sbjct:  382 RCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNIKDIFKEESFHA 455
[Close]
BLAST of mRNA_F-serratus_M_contig848.19863.1 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.980e-9
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:  414 GCSSGNCIECCIKSGLPCEAHAKQVERKQREHELL-AMPDEGPCEDVARLPKGVFKEVSFHA 474
            GC++G+C++CC KS LPC AHAKQ++RK+ E ELL A P +    +  R  K  FKE SFHA
Sbjct:  796 GCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNIKDTFKEESFHA 857
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LL83_ECTSI2.190e-1450.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE9.550e-1246.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNI0_ECTSI2.360e-1151.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE4.980e-953.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:113416..117036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19863.1mRNA_F-serratus_M_contig848.19863.1Fucus serratus malemRNAF-serratus_M_contig848 110908..117452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig848.19863.1 ID=prot_F-serratus_M_contig848.19863.1|Name=mRNA_F-serratus_M_contig848.19863.1|organism=Fucus serratus male|type=polypeptide|length=517bp
MVNLNKRSRSVAAAPPADTKGGVYTAEVGLECAPDETIRPFYPGRVSGRG
EGGSGDGRALVMAVKPRVAATKKKTRRRSLERVATRAAPIFSEAAPIFSE
AAQNNLGRGGGRGAYEDGNTKPRAAGGVTKDSDVVPADTAADGTVSKKVP
GSYKICREETCPLHASFGIKGGRRVYCRKHHKEGMVNLVVEAKWARRAEE
AAAAAASKAAASGSRARKPPQTDRMKQQQGPAGRPPREDSGRAALCPPPA
PSRMTRSPVWLGGGAFRRDGCGGLGVRKEEVEAAKGKGKGKERAAVGPRD
ISTCSLRKRKGVVDVNDRSELGGSTSGSVKHEDERGGGSKGSGGGNGVGV
EAKHVVVQSPKTDHARIVKKPRGFRRVREAGVREGEGDRDGDGGGGGAKG
RSRCGVCGRLSKLGCSSGNCIECCIKSGLPCEAHAKQVERKQREHELLAM
PDEGPCEDVARLPKGVFKEVSFHAPLRVSGHYARSVGHRKPSERLRRSGA
SRISYTEGARRAQWKP*
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