mRNA_F-serratus_M_contig83.19685.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 177 bits (448), Expect = 3.120e-47 Identity = 94/230 (40.87%), Postives = 139/230 (60.43%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLGE 690
DEP T EA + +W+ A E+ + ++ V+RP+ + V+ K +FK K G DG +EKYK R VAKGF Q++G+ + E+ +P +S+R LA+ A+LD E Q+DV+ AFL D+ EE+Y+++P G+R S + + +L KA+YGL AG W KK E A GF R +D VF + G +++II +YVDD L+LS+ EDL+S F + DLGE
Sbjct: 601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGE 829
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT) HSP 1 Score: 168 bits (425), Expect = 5.670e-47 Identity = 91/231 (39.39%), Postives = 142/231 (61.47%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLG 687
+EP T EA SSE PQW+ A+K E++ + W++VD P G LG + IFKRK+ DG ++KYK R V KG+RQ +G+ Y ++ SP +SIRM LA+ A + + Q+DV+ AFL ++ EE+Y+E P+G+ S N+V +L K++YGL A W +KF ++ GF+ ++ D CV+ K+ VI+ +YVDD L++ ++ + L+S F +KD+G
Sbjct: 28 NEPKTYQEAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYV-KNTTHGYVILCLYVDDMLIIGSNDKMIRSTKDMLKSKFDMKDMG 257
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 175 bits (444), Expect = 1.140e-46 Identity = 94/230 (40.87%), Postives = 138/230 (60.00%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLGE 690
DEP T EA + +W+ A E+ + ++ V+RP+ + V+ K +FK K G DG +EKYK R VAKGF Q++G+ + E+ +P +S+R LA+ A+LD E Q+DV+ AFL D+ EE+Y+++P G+ S + V +L KA+YGL AG W KK E A GF R +D VF + G +++II +YVDD L+LS+ EDL+S F + DLGE
Sbjct: 924 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGE 1152
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A182GR37_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR37_AEDAL) HSP 1 Score: 166 bits (419), Expect = 7.320e-46 Identity = 83/231 (35.93%), Postives = 135/231 (58.44%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLGEI 693
D PTT+ E + +WP W+ A++ EMD ++ W +V P+G+ + K IFK K +D +YK R VA+GF Q +G Y ++ SP ++R LA+ Q W Q+DV+ AFL ++TEE+Y+ P+G+ V RL++++YGL A W ++F ++ GF RS+ D C++RR G VI+V+YVDD L+ S ++++ + L + F + D+GE+
Sbjct: 93 DLPTTVSECRQREDWPLWKQAMQEEMDSLVSNEKWTLVKLPEGRNAVTCKWIFKLKHSEDNEAPRYKARLVARGFTQKQGFDYSDTYSPLARMDTLRTVLALANQRGWSVHQMDVKCAFLNGELTEEIYMLQPEGFEQRDGLVCRLKRSLYGLKQAARSWNERFHNFVVRLGFVRSRNDLCLYRRGS-GDTQVILVIYVDDVLIASGSEKLVGTIKKCLSTEFEMTDVGEV 322
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2I0J8X0_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J8X0_PUNGR) HSP 1 Score: 163 bits (413), Expect = 1.630e-45 Identity = 89/232 (38.36%), Postives = 137/232 (59.05%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLGE 690
DEPTT EA + + +W A++ EM+ VW +VD P+G ++G K +FK+K DG V +K R VAKGFRQ+ G+ Y E+ SP SIR+ LA+ A D+E Q+DV+ AFL ++ E++Y+ P+G+ D S +V +LQ+++YGL A W +F + GF +++ +PCV++ K G +V+ +V+YVDD L++ L F +KDLGE
Sbjct: 70 DEPTTYAEAVIGPDSEKWLVAMRSEMESMYTNQVWTLVDPPEGAKLIGYKWVFKKKTDMDGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGLKQASRSWNFRFDDAIKEFGFNKNEDEPCVYK-KVSGSIVIFLVLYVDDILLIGNDIPSLQSVKTWLGRCFSMKDLGE 300
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 172 bits (435), Expect = 1.800e-45 Identity = 82/230 (35.65%), Postives = 139/230 (60.43%), Query Frame = 1
Query: 1 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLGE 690
D P TL +A+ S EW W+ A++ E + G W++ + + + ++G++ +F +K + G+V +YK R VA+GF QI G+ Y ++ SP ++R +A+ A DWE RQ+D++ A+L ++ EE+++E P+G+ D +V RL+ +YGL AG +W KK +L GF R+ ADPCV+ GK+ I+ V+VDD ++ +++ + L+ F +KDLGE
Sbjct: 853 DVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGE 1081
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5N6PND6_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PND6_9ASTR) HSP 1 Score: 164 bits (414), Expect = 2.070e-45 Identity = 90/231 (38.96%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 4 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLG 687
EP T +A SSE PQW+ A+K E+D + W++VD P G LG + IFKRK+ DG ++KYK R V KGFRQ +G+ Y ++ SP +SIR+ LA+ A + E Q+DV+ AFL D+ EE+ +E P+G+ +P Q G+ L K++YGL A W +KF ++ GF+ ++ D CV+ K+ + VI+ +YVDD +++ ++ + L++ F +KD+G
Sbjct: 70 EPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEILMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMVIVGSDDKMIKSTKDMLKTRFDMKDMG 298
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR) HSP 1 Score: 169 bits (428), Expect = 3.010e-45 Identity = 93/231 (40.26%), Postives = 142/231 (61.47%), Query Frame = 1
Query: 4 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLG 687
EP T EA SSE PQW+ A+K E+D + W++VD P G LG + IFKRK+ DG ++KYK R V KGFRQ +G+ Y ++ SP +SIR+ LA+ A + E Q+DV+ AFL D+ EE+Y+E P+G+ +P Q G+ L K++YGL A W +KF ++ GF+ ++ D CV+ K+ + VI+ +YVDD L++ ++ + L++ F +KD+G
Sbjct: 135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 363
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5N6NFL8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFL8_9ASTR) HSP 1 Score: 167 bits (423), Expect = 4.340e-45 Identity = 91/230 (39.57%), Postives = 140/230 (60.87%), Query Frame = 1
Query: 4 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLG 687
EP T EA SSE PQW+ A+K E+D + W++VD P G LG + IFKRK+ DG ++KYK R V KGFRQ +G+ Y ++ SP +SIR+ LA+ A + E Q+DV+ AFL D+ EE+Y+E P+G+ +V +L K++YGL A W +KF ++ GF+ ++ D CV+ K+ + VI+ +YVDD L++ ++ + L++ F +KD+G
Sbjct: 135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 363
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR) HSP 1 Score: 169 bits (429), Expect = 5.500e-45 Identity = 93/231 (40.26%), Postives = 143/231 (61.90%), Query Frame = 1
Query: 4 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLW*KKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDPLVLSETKQVEHRAMEDLRSSFPIKDLG 687
EP T EA SSE PQW+ A+K E+D + +W++VD P G LG + IFKRK+ DG ++KYK R V KGFRQ +G+ Y ++ SP +SIR+ LA+ A + E Q+DV+ AFL D+ EE+Y+E P+G+ +P Q G+ L K++YGL A W +KF ++ GF+ ++ D CV+ K+ + VI+ +YVDD L++ ++ + L++ F +KD+G
Sbjct: 291 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINKCDKCVYV-KNTMRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 519 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig83.19685.1 >prot_F-serratus_M_contig83.19685.1 ID=prot_F-serratus_M_contig83.19685.1|Name=mRNA_F-serratus_M_contig83.19685.1|organism=Fucus serratus male|type=polypeptide|length=151bp MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDback to top mRNA from alignment at F-serratus_M_contig83:345253..345948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig83.19685.1 ID=mRNA_F-serratus_M_contig83.19685.1|Name=mRNA_F-serratus_M_contig83.19685.1|organism=Fucus serratus male|type=mRNA|length=696bp|location=Sequence derived from alignment at F-serratus_M_contig83:345253..345948- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig83:345253..345948- >mRNA_F-serratus_M_contig83.19685.1 ID=mRNA_F-serratus_M_contig83.19685.1|Name=mRNA_F-serratus_M_contig83.19685.1|organism=Fucus serratus male|type=CDS|length=906bp|location=Sequence derived from alignment at F-serratus_M_contig83:345253..345948- (Fucus serratus male)back to top |