prot_F-serratus_M_contig83.19681.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig83.19681.1
Unique Nameprot_F-serratus_M_contig83.19681.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length227
Homology
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BLAST of mRNA_F-serratus_M_contig83.19681.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.690e-54
Identity = 95/162 (58.64%), Postives = 120/162 (74.07%), Query Frame = 0 
Query:   67 GGLIGSIEGIFNRKREAETTLPQDPNADKPARLKQLEERRKEYRWSTEGLPVGTPFLEGYPPADEFPATTWIVQAVGAILRVTVGTLRGTIGVSEIVEALTDLEHAESFANRISQLF-GESKIDDRALDIDDFKDLHAFPIKTPESAYDFEDDEAFARLRLQ 227
            G  + SI   F   RE ET+LPQDP AD+  R +QLEER+KEYRWSTEG P G P+L+G+PP DE P+  WI   V ++L++ VGTLRG++G  EI+EALTD   A++FA R+ +L  G S ID+R  DI D++DLHAFPIK P+S YD+EDDEAFARLRLQ
Sbjct:   53 GFSLSSITDFFTSNREGETSLPQDPKADQAHRKEQLEERKKEYRWSTEGPPEGAPYLDGFPPNDELPSVAWITDLVASVLKIAVGTLRGSLGAGEIMEALTDPAKAKTFATRVRELISGNSAIDERPADIGDYEDLHAFPIKNPKSMYDWEDDEAFARLRLQ 214
[Close]
BLAST of mRNA_F-serratus_M_contig83.19681.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 8.410e-46
Identity = 84/163 (51.53%), Postives = 115/163 (70.55%), Query Frame = 0 
Query:   65 SLGGLIGSIEGIFNRKREAETTLPQDPNADKPARLKQLEERRKEYRWSTEGLPVGTPFLEGYPPADEFPATTWIVQAVGAILRVTVGTLRGTIGVSEIVEALTDLEHAESFANRISQLFGESKIDDRALDIDDFKDLHAFPIKTPESAYDFEDDEAFARLRLQ 227
            SLG L GS +         ET LPQDP AD   R K+L + +KEY W T G P+  PFLEG+PP DE P+ TW+ + V ++L   VGT RG IG  EI+EA+++   A++FA R+S+L  E+KI+DR +DI+D++DLHA+PIKTP+S +DF++D+AFAR RLQ
Sbjct:   76 SLGSLFGSPD--------PETCLPQDPKADTSGRKKRLAKAQKEYPWRTRGTPIDMPFLEGFPPKDELPSRTWVSKLVSSLLGAVVGTTRGNIGAGEIIEAVSNPAKAKNFATRVSELIKEAKINDRPVDINDYEDLHAWPIKTPDSVFDFDEDDAFARQRLQ 230
[Close]
BLAST of mRNA_F-serratus_M_contig83.19681.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 9.770e-41
Identity = 72/159 (45.28%), Postives = 110/159 (69.18%), Query Frame = 0 
Query:   69 LIGSIEGIFNRKREAETTLPQDPNADKPARLKQLEERRKEYRWSTEGLPVGTPFLEGYPPADEFPATTWIVQAVGAILRVTVGTLRGTIGVSEIVEALTDLEHAESFANRISQLFGESKIDDRALDIDDFKDLHAFPIKTPESAYDFEDDEAFARLRLQ 227
            +   + G+F     AET LPQDP AD   R  QL+  R+++ +     P+  PFLEG+PP D+ P+ +W+ +  GAI+R  VG  RGTIG+ EI+EA++D   A++F  R+ +L  E+K+++R ++I+D++DLHAFPIKTP++ YDF++D+AF R RLQ
Sbjct:    1 MFSRLTGLFGSPN-AETCLPQDPKADTAGRKNQLDAAREDFVFRQRRTPIDMPFLEGFPPDDQRPSISWVTKLAGAIVRANVGATRGTIGIGEIIEAVSDPSRAKTFVKRLRELISEAKVNERPVNINDYEDLHAFPIKTPDAMYDFDEDDAFTRQRLQ 158
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBX4_ECTSI1.690e-5458.64Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K920_9PHAE8.410e-4651.53Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KD72_9PHAE9.770e-4145.28Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.86
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig83contigF-serratus_M_contig83:155455..157810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig83.19681.1mRNA_F-serratus_M_contig83.19681.1Fucus serratus malemRNAF-serratus_M_contig83 113230..157810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig83.19681.1 ID=prot_F-serratus_M_contig83.19681.1|Name=mRNA_F-serratus_M_contig83.19681.1|organism=Fucus serratus male|type=polypeptide|length=227bp
MTHFRAIAVVVLAVGVALILTALPSTRGAPPASPATCSSGTKPSDGQCEA
PKKTEDDVGHYNGHSLGGLIGSIEGIFNRKREAETTLPQDPNADKPARLK
QLEERRKEYRWSTEGLPVGTPFLEGYPPADEFPATTWIVQAVGAILRVTV
GTLRGTIGVSEIVEALTDLEHAESFANRISQLFGESKIDDRALDIDDFKD
LHAFPIKTPESAYDFEDDEAFARLRLQ
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