prot_F-serratus_M_contig813.19540.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig813.19540.1
Unique Nameprot_F-serratus_M_contig813.19540.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length131
Homology
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 4.840e-27
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 0
Query:   25 MSNPSFHHPSLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAA 98
            M++  F  P+L+VLWQAVT +PMDFQ WTALLSQVE+ GS  DA +AYD FLRQFPLCFGYW+KYA+LAR+H A
Sbjct:    1 MTDSPFQAPALQVLWQAVTFDPMDFQCWTALLSQVESVGSSADAHRAYDEFLRQFPLCFGYWKKYANLARKHPA 74          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A383WHJ6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHJ6_TETOB)

HSP 1 Score: 77.8 bits (190), Expect = 4.160e-14
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    3 PLRTELQHRLTEKLGVAEVKFIMSNPSFHHPSLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAARSAIAKSQDRG 109
            P+  E +   TE    A      +NP       + L++AVT +P DF +WT+L+S  E    V   + AYD FL +FPLC+GYW++YA   RRH +  A A   +RG
Sbjct:   17 PVAMEAEANATEAAAAAPEP---ANPLLER--CQELFKAVTEKPDDFNTWTSLISTAEKLDDVQHIRSAYDAFLAEFPLCYGYWKRYAEAERRHGSSEAAAAVLERG 118          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: UPI000719AB44 (pre-mRNA-processing factor 39-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AB44)

HSP 1 Score: 75.5 bits (184), Expect = 2.710e-13
Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 0
Query:    5 RTELQHRLTEKLGVAEVKFIMSNPSFHHPSLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRH 96
            + E Q RL E+ G+ E              L   W+AV   P DF  WT LL  VE   ++ +A++A+D FL  +P CFGYW+KYA + +RH
Sbjct:  342 KVERQMRLAEQKGITE--------------LDKFWKAVVENPSDFTGWTYLLQYVEQQNALEEAREAFDDFLDVYPFCFGYWKKYADVEKRH 419          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: E9HCT1_DAPPU (Uncharacterized protein n=11 Tax=Daphnia TaxID=6668 RepID=E9HCT1_DAPPU)

HSP 1 Score: 75.1 bits (183), Expect = 3.610e-13
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   33 PSLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAARSAIAKSQDRG 109
            P L+  W+ V   P DFQ+WT+LL  V+    V  A++AYD FLR++P C+GYW+K+A   ++ A +    K  +RG
Sbjct:  174 PDLEKFWRPVIESPKDFQAWTSLLQYVDHENDVAAAREAYDSFLRRYPYCYGYWKKWADYEKKKAMKKDCEKVFERG 250          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A388LUR0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LUR0_CHABU)

HSP 1 Score: 74.7 bits (182), Expect = 4.880e-13
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   38 LWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAARSAIAKSQDRGAQG 112
            LW  VT+ P DF SWT L+ + E    +   ++ YD FL +FPLC+GYW+KYA    RH  +  IA+  +R  +G
Sbjct:   47 LWSIVTANPADFTSWTLLIQEAERLDVIDKIRRVYDTFLAEFPLCYGYWKKYADHEGRHGHQEKIAEVYERAVKG 121          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A0B2W0B0_TOXCA (Pre-mRNA-processing factor 39 n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2W0B0_TOXCA)

HSP 1 Score: 72.4 bits (176), Expect = 3.000e-12
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   34 SLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRH 96
            +LK  W+ +   P DF +WT LL  VE       A++AYD FL ++P C+GYWRKYA + RRH
Sbjct:   72 TLKKCWRPLKENPNDFDAWTRLLQCVEQLDETKAAREAYDEFLTRYPYCYGYWRKYAEMERRH 134          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A183VAA8_TOXCA (Uncharacterized protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183VAA8_TOXCA)

HSP 1 Score: 72.4 bits (176), Expect = 3.010e-12
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   34 SLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRH 96
            +LK  W+ +   P DF +WT LL  VE       A++AYD FL ++P C+GYWRKYA + RRH
Sbjct:    3 TLKKCWRPLKENPNDFDAWTRLLQCVEQLDETKAAREAYDEFLTRYPYCYGYWRKYAEMERRH 65          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A7S0VQJ0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VQJ0_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 3.080e-12
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   38 LWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYA 90
            LW +VTS+P DF SWTA L+ VE    +   +  YD FL ++PLC+GYW+KYA
Sbjct:   27 LWSSVTSDPSDFSSWTAALTAVEKLNDMDKLRSVYDAFLTEYPLCYGYWKKYA 79          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A3P8VAH3_CYNSE (Pre-mRNA-processing factor 39-like n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VAH3_CYNSE)

HSP 1 Score: 72.4 bits (176), Expect = 3.100e-12
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   28 PSFHHPSLKVLWQAVTSEPMDFQSWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARR 95
            P FH      LW+AVT  P DF SWT LL   E    V  ++QA + FL ++PLC+GYW+K+A L RR
Sbjct:   41 PEFHR-----LWKAVTDNPFDFTSWTELLQYCEQENHVTASRQALEAFLARYPLCYGYWKKFADLERR 103          
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Match: A0A2Z7BCK2_9LAMI (Pre-mRNA-processing factor 39-like n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCK2_9LAMI)

HSP 1 Score: 72.0 bits (175), Expect = 4.310e-12
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   38 LWQAVTSEPMDFQSWTALLSQVEAF--GSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAARSAIAKSQDRGAQG 112
            LW  VT+  MDF +WT+L+ + E    G++   Q+ YD FL +FPLC+GYW+KYA    R ++   +A+  +R  QG
Sbjct:  136 LWSIVTTNSMDFNAWTSLVEETERISEGNINKIQKVYDTFLAEFPLCYGYWKKYADHVARLSSVDKVAEVYERAVQG 212          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR95_ECTSI4.840e-2770.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A383WHJ6_TETOB4.160e-1438.32Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
UPI000719AB442.710e-1339.13pre-mRNA-processing factor 39-like n=1 Tax=Priapul... [more]
E9HCT1_DAPPU3.610e-1341.56Uncharacterized protein n=11 Tax=Daphnia TaxID=666... [more]
A0A388LUR0_CHABU4.880e-1342.67Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0B2W0B0_TOXCA3.000e-1247.62Pre-mRNA-processing factor 39 n=2 Tax=Toxocara can... [more]
A0A183VAA8_TOXCA3.010e-1247.62Uncharacterized protein n=1 Tax=Toxocara canis Tax... [more]
A0A7S0VQJ0_9CHLO3.080e-1252.83Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A3P8VAH3_CYNSE3.100e-1248.53Pre-mRNA-processing factor 39-like n=3 Tax=Cynoglo... [more]
A0A2Z7BCK2_9LAMI4.310e-1241.56Pre-mRNA-processing factor 39-like n=1 Tax=Dorcoce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 40..112
e-value: 8.0E-10
score: 40.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 40..107
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 31..101
NoneNo IPR availablePANTHERPTHR17204:SF5PRE-MRNA-PROCESSING FACTOR 39coord: 31..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig813contigF-serratus_M_contig813:144268..146217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig813.19540.1mRNA_F-serratus_M_contig813.19540.1Fucus serratus malemRNAF-serratus_M_contig813 144268..146219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig813.19540.1 ID=prot_F-serratus_M_contig813.19540.1|Name=mRNA_F-serratus_M_contig813.19540.1|organism=Fucus serratus male|type=polypeptide|length=131bp
PNPLRTELQHRLTEKLGVAEVKFIMSNPSFHHPSLKVLWQAVTSEPMDFQ
SWTALLSQVEAFGSVGDAQQAYDGFLRQFPLCFGYWRKYASLARRHAARS
AIAKSQDRGAQGGEDAAGPSVGAAAESMEVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf