prot_F-serratus_M_contig126.1950.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig126.1950.1
Unique Nameprot_F-serratus_M_contig126.1950.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length297
Homology
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BLAST of mRNA_F-serratus_M_contig126.1950.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.040e-117
Identity = 173/275 (62.91%), Postives = 225/275 (81.82%), Query Frame = 0 
Query:   22 AGGSVSVSIKDLGALAGLESLNIQGIYDHPVSETVTGKASYSFNKDRVIPASMGAATVTDTKFGTLTSTVSIDPQERSASVDATLHTEDYGTFSTSLKAKDQVMVMVDFLGPVRWTSKPLNFPFALKEPTPMVIGIVHDVKTKEGQLNFSAKLSDNLDGKIVLPSTGDPIATVIASHSPDMDSDIRASANVLDLLSSGVGKGSLGVSYRRDLDTVQGSSSRVTLEGKDTGDFAWSLSNTTKRMTLVLSGRGRLRLRGEDEGISSTVALRSSFRVF 296
            AGG+VS++IKDLGA+ G++SL+I+G YD  +S+ V+GKASY FNKDRV+PA + A++ TDT +G    TV++DPQ+++A V+ ++  E+ G FST+LKA ++   +   LGP++WTS P++FPFAL+E TPMVI I HD+ TKEG L+ +AKL+ N DGK++LPS GDP+AT++ SHSPD  SDIRASANVLDL+ SG GKG++GV+YRRDLD V GSSSRVTLEGKDTGDFAWSLSNT+KRMTLVLSGRGR+  RGE  G+ STV+LR SFR+F
Sbjct:   26 AGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGV---LGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVAGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI1.040e-11762.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.791

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig126contigF-serratus_M_contig126:417636..433221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig126.1950.1mRNA_F-serratus_M_contig126.1950.1Fucus serratus malemRNAF-serratus_M_contig126 416702..433441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig126.1950.1 ID=prot_F-serratus_M_contig126.1950.1|Name=mRNA_F-serratus_M_contig126.1950.1|organism=Fucus serratus male|type=polypeptide|length=297bp
MRPVVDMSYLGLLLLLPCSTLAGGSVSVSIKDLGALAGLESLNIQGIYDH
PVSETVTGKASYSFNKDRVIPASMGAATVTDTKFGTLTSTVSIDPQERSA
SVDATLHTEDYGTFSTSLKAKDQVMVMVDFLGPVRWTSKPLNFPFALKEP
TPMVIGIVHDVKTKEGQLNFSAKLSDNLDGKIVLPSTGDPIATVIASHSP
DMDSDIRASANVLDLLSSGVGKGSLGVSYRRDLDTVQGSSSRVTLEGKDT
GDFAWSLSNTTKRMTLVLSGRGRLRLRGEDEGISSTVALRSSFRVF*
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