mRNA_F-serratus_M_contig809.19486.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig809.19486.1 vs. uniprot
Match: D7FHS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS7_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.260e-93 Identity = 182/306 (59.48%), Postives = 210/306 (68.63%), Query Frame = 3
Query: 651 ALFDDTERFESCIVVGDTVRSAKDGTKEHVGPGTYSPRLSNLKDFGHAGVSRSRRPNMDPPTSPRSSEYQRDANECVVRDGVLFHKSPFLGSGPGPGSYSPRTFSNNHRRGITAKPSSGPTGRQAWDLRGSEGGAPLVYLRGGQTVSPSMGNSPRMADFSRVALRDGVLLLRGAEDGHRSKGIGPGTYDGFSNREDSMSMRSYNVRAKCSRTLRKRSYSFSGTSSTARAYLFLQ-------PSRSPQGTVDSRTDYLQLL--DSRMQAGGVPPASLT-RPISPASVMLTSMRARQASPTALGGKSG 1538
ALFDD ERF+S IVVGDTVR KD T+EHVGPG YSP ++ KDFGH GVS SRR NMDPP SPRS+E+QR A VVRDGV FH SPFL +GPGPG+YSP S++H RG TAKPSSG GRQAWDLRGS GG PL R G +VS SMG +PRM DF++VALRDGVLLLR A DGHRS GIGPG Y G SN +D M+ RSYN+RA+ S+ R+RS SFSGTSSTA+A+L L P+RS + R D L LL ++ GGV R SP T +R SP A G+SG
Sbjct: 3 ALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHATGSVVRDGVWFHPSPFLAAGPGPGAYSPSIISSDHERGRTAKPSSGAVGRQAWDLRGSAGGTPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPD-LHLLGRNTYPAPGGVGGRGGDGRSTSPGKERRTDTGSRSLSPKANRGRSG 307
BLAST of mRNA_F-serratus_M_contig809.19486.1 vs. uniprot
Match: A0A6H5JYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF7_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.580e-24 Identity = 79/155 (50.97%), Postives = 96/155 (61.94%), Query Frame = 3
Query: 1098 MGNSPRMADFSRVALRDGVLLLRGAEDGHRSKGIGPGTYDGFSNREDSMSMRSYNVRAKCSRTLRKRSYSFSGTSSTARAYLFL-------QPSRSPQGTVDSRTDYLQLLDSRMQA-GGVP----------PASLTRPISPASVMLTSMRARQA 1508
MG +PRM DF++VALRDGVLLLR A DGHRS GIGPG Y G SN +D M+ RSYN+RA+ S+ R+RS SFSGTSSTA+A+L L P+RS + R D L + A GGV P R +SPAS ML+S+R R A
Sbjct: 1 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQVRRERSLSFSGTSSTAKAFLSLASSMARTNPTRSNKEAASCRPDLHLLTRNTYPAPGGVGGRGGDGRSTFPGKERRCVSPASAMLSSLRGRAA 155 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig809.19486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig809.19486.1 >prot_F-serratus_M_contig809.19486.1 ID=prot_F-serratus_M_contig809.19486.1|Name=mRNA_F-serratus_M_contig809.19486.1|organism=Fucus serratus male|type=polypeptide|length=524bp MALFDDTERFESCIVVGDTVRSAKDGTKEHVGPGTYSPRLSNLKDFGHAGback to top mRNA from alignment at F-serratus_M_contig809:246851..254375+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig809.19486.1 ID=mRNA_F-serratus_M_contig809.19486.1|Name=mRNA_F-serratus_M_contig809.19486.1|organism=Fucus serratus male|type=mRNA|length=7525bp|location=Sequence derived from alignment at F-serratus_M_contig809:246851..254375+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig809:246851..254375+ >mRNA_F-serratus_M_contig809.19486.1 ID=mRNA_F-serratus_M_contig809.19486.1|Name=mRNA_F-serratus_M_contig809.19486.1|organism=Fucus serratus male|type=CDS|length=3144bp|location=Sequence derived from alignment at F-serratus_M_contig809:246851..254375+ (Fucus serratus male)back to top |