prot_F-serratus_M_contig804.19441.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig804.19441.1
Unique Nameprot_F-serratus_M_contig804.19441.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length329
Homology
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.630e-66
Identity = 130/328 (39.63%), Postives = 189/328 (57.62%), Query Frame = 0
Query:    1 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            +++VVHVDDI A   ++   D+F A+L +   +K++G+  +  GC   RN++   L   Q  + + +   + V     +P +SGV  LS  D        E    FP+RE VG LM  AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  + I++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL +VVK++LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHID + H +R+  + + + V +V S  Q+AD LTK L    F  H  F++N+
Sbjct:  142 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL)

HSP 1 Score: 216 bits (551), Expect = 7.950e-65
Identity = 131/329 (39.82%), Postives = 192/329 (58.36%), Query Frame = 0
Query:    3 VVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKN--KAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQV--QEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            + ++VDD L +  D  M  R    L  +FR+KD+G A+YC+G  I+RN++  EL  DQ  Y+E ++ RF++ +      P  S    L K+  P++  E EEMK  PY+EAVG L   A  TRPDI+ AV AV++F  NPG  H EAV +I +YL  T   R+ +  +G G  +  YTD+D+G  +D+RRS +G V     GAISW+ + Q   A  + EAEY+ALS  +++ L+ R +  Q F E  +++     F DN+ AI +A N   + RTKH+D + H + DA D+  V + YV ++DQ AD  TKPL VQ    + K I+ +
Sbjct:    4 ITIYVDDFLIFTNDAKMRKRLKTFLCNRFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDCHPVSTPFESSE-RLDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRILRYLKGTINNRLLFNKRGNGEII-GYTDADWGGDVDSRRSTTGYVFMFQGGAISWNVKRQPTVALSSCEAEYMALSRTIQEALWWRNMLKQIFGETQIKI-----FCDNQSAISIAKNGSYNPRTKHVDIRYHFVHDAIDSGSVAINYVNTKDQAADGFTKPL-VQSGVTNMKRIIGI 324          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.660e-63
Identity = 129/325 (39.69%), Postives = 188/325 (57.85%), Query Frame = 0
Query:    4 VVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            VVHVDDI +  +++   D+F  +L     +K++GD  +  GC   R+  A  LK  Q  Y E +   F V+   +IP   G+  LS+ D      + EE+  +P+RE +G LM  AT TRPDIA AVRAVAR+C +P   H  A + I  Y++ T +  I +  G   GL ME + D+D+ +    RRSVSG ++    G ISW SR Q+     T+EAEYV+L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHID + H IR+    + + + +V S  Q AD LTK L    F  H  +++++
Sbjct:  121 VVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.690e-62
Identity = 130/328 (39.63%), Postives = 189/328 (57.62%), Query Frame = 0
Query:    1 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            +++VVHVDDI A   ++   D+F A+L +   +K++G+  +  GC   RN++   L   Q  + + +   + V     +P +SGV  LS  D        E    FP+RE VG LM  AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  + I++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL +VVK++LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHID + H +R+  + + + V +V S  Q+AD LTK L    F  H  F++N+
Sbjct: 1478 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 2.050e-62
Identity = 129/328 (39.33%), Postives = 189/328 (57.62%), Query Frame = 0
Query:    1 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            +++VVHVDDI A   ++   D+F A+L +   +K++G+  +  GC   RN++   L   Q  + + +   + V     +P +SGV  LS  D        E    FP+RE VG LM  AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  + I++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL +VVK++LFLRQ+  FM P + +  + +FEDN+GAI+LA N  ++  +KHID + H +R+  + + + V +V S  Q+AD LTK L    F  H  F++N+
Sbjct:  972 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 7.440e-62
Identity = 129/325 (39.69%), Postives = 188/325 (57.85%), Query Frame = 0
Query:    4 VVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 327
            VVHVDDI +  +++   D+F  +L     +K++GD  +  GC   R+  A  LK  Q  Y E +   F V+   +IP   G+  LS+ D      + EE+  +P+RE +G LM  AT TRPDIA AVRAVAR+C +P   H  A + I  Y++ T +  I +  G   GL ME + D+D+ +    RRSVSG ++    G ISW SR Q+     T+EAEYV+L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHID + H IR+    + + + +V S  Q AD LTK L    F  H  +++++
Sbjct:  295 VVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA)

HSP 1 Score: 212 bits (539), Expect = 9.310e-62
Identity = 125/313 (39.94%), Postives = 194/313 (61.98%), Query Frame = 0
Query:    2 VVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAK--IPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 312
            +V ++VDD+L  ++ +A++    A + +KFR+KD+G A + +G  I  + + R L   Q  Y ES++K+F  +N      P   GV  L+KAD+P+  ++K +MK  PYR  VG LM  A  TRPDI+ AV  ++RF ENPG  H +A +K+ +YLL TK+  I Y G   G  +EAY+D+++    D RRSVSG +L L    + W S  Q+  A  ++EAEY+ALS+ VK+ +++R++ + +    +VGA+ ++EDN+GA+ LA N     RTKHID + H IR+   +  V + YV +++Q AD +TK L
Sbjct:  104 IVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGL 413          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 9.270e-61
Identity = 127/311 (40.84%), Postives = 182/311 (58.52%), Query Frame = 0
Query:    4 VVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQR-VRVAYVRSEDQQADLLTKPL 312
            VVHVDDI +  +++   D+F  +L    R+K++GD  +  GC   R+  A  LK  Q  Y E +   F V+   +IP   G+  LS+ D      + EE+  +P+RE +G LM  AT TRPDIA AVRAVAR+C +P   H  A + I  Y++ T +  I +  G   GL ME + D+D+ +    RRSVSG ++    G ISW SR Q+     T+EAEYV+L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++   KHID + H IR+    ++ + + +V S  Q AD LT+ L
Sbjct:   20 VVHVDDIFSIGEEERY-DQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGM-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.480e-60
Identity = 125/313 (39.94%), Postives = 191/313 (61.02%), Query Frame = 0
Query:    2 VVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKI--PAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 312
            +V ++VD++L  ++ +A++    A + +KFR+KD+G A + +G  I  N + R L   Q  Y ES++K F  +N      P   GV  L+KAD+P+  ++K +MK  PYR  VG LM  A  TRPD++ AV  ++RF ENPG  H ++ +K  +YLL TK+  I Y GQ  G  +EAY+D+D+    D RRSVSG +L L    + W S  Q+  A  ++EAEY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID + H IR+      V + YV +++Q AD +TK L
Sbjct:  298 IVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATEIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVGNEVELEYVDTKNQLADFMTKGL 607          
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.610e-60
Identity = 126/313 (40.26%), Postives = 196/313 (62.62%), Query Frame = 0
Query:    2 VVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKI--PAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 312
            +V ++VDD+L  ++  A++    A + +KFR+KDMG A + +G  I  + + R L   Q  Y ES++K+F  +N      P   GV  L+KAD+P+  ++K +MK+ PYR  VG LM  A  TRPDI+ AV  ++RF ENPG  H +A +K+ +YLL TK+  I Y G   G  +EAY+D+D+    D RRSVSG +L L +  + W S  Q+  A  ++EAEY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID + H +R+ + +  V++ YV +++Q AD +TK L
Sbjct:  596 IVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGL 905          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFG2_9PHAE1.630e-6639.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182H216_AEDAL7.950e-6539.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE1.660e-6339.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE1.690e-6239.63Integrase catalytic domain-containing protein n=18... [more]
A0A6H5JG40_9PHAE2.050e-6239.33Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KQB8_9PHAE7.440e-6239.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0MK94_9STRA9.310e-6239.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE9.270e-6140.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3Q8N8_9STRA1.480e-6039.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3YGI7_9STRA1.610e-6040.26Retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..76
e-value: 1.0E-9
score: 38.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 108..316
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 108..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig804contigF-serratus_M_contig804:260201..261187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig804.19441.1mRNA_F-serratus_M_contig804.19441.1Fucus serratus malemRNAF-serratus_M_contig804 260195..261187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig804.19441.1 ID=prot_F-serratus_M_contig804.19441.1|Name=mRNA_F-serratus_M_contig804.19441.1|organism=Fucus serratus male|type=polypeptide|length=329bp
MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRN
RKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEK
EEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMK
IFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALT
KGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVG
AVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRS
EDQQADLLTKPLDVQKFCKHAKFILNVV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like