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Homology
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: D8LQ56_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ56_ECTSI) HSP 1 Score: 355 bits (911), Expect = 4.560e-116 Identity = 181/222 (81.53%), Postives = 203/222 (91.44%), Query Frame = 2
Query: 443 MARRITFIGVVRFTDRVLVAGYSPSEADDALIVKELMANPDTFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
M+RRITF+GV+RFTDRVLVAGYSPSEADD+LI+KELM+NPDTFVEPR+RY+ EG MFSIHFVADD NR+Y+CVTDKEYPARIAF LLEE QTKFLTKVGDKSLTA+EG L+RTMKSSFSDLC+K++DIR+VDRM+AVQDKVDVVK+TMQDNIQQMLANEERLDQIS+NA+NLNEQAKVFQNRSSALRRQM+CKAIKMWLLLAL VP+ H KN
Sbjct: 1 MSRRITFLGVIRFTDRVLVAGYSPSEADDSLIIKELMSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKN 222
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A835YU71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU71_9STRA) HSP 1 Score: 263 bits (672), Expect = 6.460e-79 Identity = 135/246 (54.88%), Postives = 189/246 (76.83%), Query Frame = 2
Query: 443 MARRITFIGVVRFTDRVLVAGYSPS-EADDALIVKELMANPDTFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVF-----------------------QNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
M+ R++FIGV RF D++ VA YSP + +D++ VK ++++P+ FVEP RRYT+EG++ +HFVADD NRVY VTDK+YPAR+AFALL+E+Q+KFLTKVG+KSL+A+E +L+RTM+SSF+D+CLK++D+++VD++++VQ KVD VK M++NI QMLANEE L+ IS NA+NLNEQA+ QNRS+ALRR M+CKA+KMW LLA ++TI+L++IIVPL + KN
Sbjct: 1 MSVRVSFIGVYRFLDQICVAQYSPKGDTNDSIAVKSVISSPNVFVEPGRRYTNEGDVCCVHFVADDSNRVYTVVTDKQYPARVAFALLDEVQSKFLTKVGEKSLSAKEDTLSRTMRSSFADICLKYDDVKNVDKLASVQGKVDAVKTKMEENISQMLANEETLESISANAENLNEQARXXXXXXXXXXXXXXXXXXXXXXXXXQNRSTALRRNMRCKALKMWFLLAFVITIVLIIIIVPLAMYSKN 246
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: W7U318_9STRA (R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U318_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.690e-33 Identity = 78/223 (34.98%), Postives = 131/223 (58.74%), Query Frame = 2
Query: 440 KMARRITFIGVVRFTDRVLVAGYSPSEADDALIVKELMANPDTFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
K + I F+GV RF DR +VA ++ + D VKE++ + V P ++ S H ++D E R++ ++++ YP R A A LEE Q FL K G KSL +E L ++ LC K++++ VD+++AV +KVD VK+ +Q+N+Q LAN LD I + A++L QA +F+ ++ L++QM K ++M +++ L + +L+VII+P+ K
Sbjct: 5 KASGNIHFLGVARFQDRAIVASHAYNTVIDLTGVKEVLKSDQLSVRPGVHFSFASGGSSWHLMSDVEGRIFILISERTYPVRAAHACLEEFQRSFLAKTGTKSLEVKEKGLDKSSGEMLRKLCEKYDNLAEVDKLAAVMNKVDAVKLVLQENVQVALANCVALDNIEKAAEDLQAQAGMFKRNATTLKKQMCWKQLRMKMVMGLAILAILLVIIIPIAVASKR 227
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A2R5GQW4_9STRA (Vesicle-associated membrane protein 7 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQW4_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.590e-32 Identity = 78/224 (34.82%), Postives = 133/224 (59.38%), Query Frame = 2
Query: 449 RRITFIGVVRFTDRVLVAGYSPSEADDAL-----IVKELMANPD--TFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNH 1099
R I F+ V R TD+V+VA + + D V E+++ PD + V P RY G++ + +F D + RVY +T EYP R+ F +L E+ +F ++GD+ TA+EG L + KS FS + ++D D++SAVQ KV+ VK+TMQ NI ML N ++ ++I + L +QA++F +++ L R + K+IK+ L++ ++ ++L+++IV L +
Sbjct: 8 RNIMFVAVARATDKVIVASFVARDGDYNKPQYFNTVNEVLSAPDFESKVAPGSRYRLVGDVNAFNFTTDQQQRVYVAITTSEYPERLVFPMLNEVIKRFQAELGDRVATAQEGGLNKKAKSLFSAVVRDYDDPSKKDKLSAVQSKVNDVKLTMQSNIDGMLRNLDKTERIETDTQALQDQARLFDTQATRLHRSERWKSIKLTLIIGSIILVVLIILIVSLARN 231
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A7S2XW80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW80_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.090e-32 Identity = 59/112 (52.68%), Postives = 87/112 (77.68%), Query Frame = 2
Query: 587 RYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEE 922
RY++EG F++HFV D+ +R+Y +T K+YP+R+AF LLEE+Q+KFL KVGD+SL+ +EG L T K F+++C ++ED+ D+++AVQ KVDVVK M+DNI +ML N+E
Sbjct: 1 RYSTEGVEFTLHFVGDERHRLYCVITAKDYPSRVAFTLLEELQSKFLDKVGDRSLSVKEGGLNGTCKKMFTNICHRYEDVEGADKLAAVQGKVDVVKSIMEDNISKMLKNQE 112
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A7R9U1U3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1U3_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.170e-27 Identity = 71/196 (36.22%), Postives = 115/196 (58.67%), Query Frame = 2
Query: 470 VVRFTDRVLVAGYSPSEADDALIVKELMANPDTFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLV 1057
V R DRV+VA +S + D VK ++ + P Y + + + H DD RV+ +T +YP R A LEE Q F+ KVGDKSL A E LTRTM + + LC K++++ +D+++A+ KV+ VK+TMQ+N++Q L +++ + ++A+ L QA VF+ ++ LR+ M K KM L++A ++
Sbjct: 1 VARLADRVVVAQHSYNVKTDPDSVKTVLRQQMN-MRPGTVYNFDVSGTTWHLTGDDAGRVFILITRSQYPLRFAHQCLEEFQRTFVAKVGDKSLKANENGLTRTMSTHLTKLCAKYDNLEELDQLTALNAKVESVKITMQENVRQALEGTHKIEALEKSAEELQAQAGVFKKQAHDLRKHMWWKNCKMKLIIAAII 195
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: W4HAK4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK4_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.420e-25 Identity = 77/226 (34.07%), Postives = 128/226 (56.64%), Query Frame = 2
Query: 455 ITFIGVVRFTDRVLVAGYSPSEADDA-------LIVKELMANP-DTFVEPRRRYTSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
+ F+ V R +D+V+VA Y+ ++ D ++ K L A V P R+T + + HF D++ VY +T +YP R+AF L+ +Q + K G K A+E L S + ++D VD++S V +VD VK TMQDNIQ +L+N E+++ + Q +++LNEQAKVF+N +L R M K +KM + + LLV +L++++++ + FK+
Sbjct: 8 VKFLAVARASDKVIVASYAHTKKDKEDSPKYVDMLSKVLRAPTWKQQVTPNSRHTLDCDPNKFHFTMDNDEMVYCAITAADYPIRLAFKLITAVQEEVSGKHGAKLAQAKENGLD--CGKSLGVIATMYDDRTKVDKVSEVMAQVDAVKSTMQDNIQVVLSNTEKMELVEQKSNDLNEQAKVFRNAGKSLARTMWWKNVKMMIAIGLLV-VLVIIVLLAMAGVFKS 230
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A7S2KAE4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAE4_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.370e-25 Identity = 62/170 (36.47%), Postives = 104/170 (61.18%), Query Frame = 2
Query: 599 EGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
E + + + AD + R +T +YP+R+A ++ E+ F+ K G +++A SLT+ + C K++D+ SVD+ S+V +KV+ VK+ MQDNI ML N E +++ + LNEQA VF+ S+ L++ MKCK +KM +LL L+V +L +I+VPL+ ++
Sbjct: 84 ESTVHQVTYGADGDGRCIAVITGLQYPSRVAVQMITELHKTFIEKFGLMAMSATTNSLTKKATPMLKEACKKYDDLSSVDKTSSVLEKVEGVKIQMQDNIAAMLVNTETAEELQDKSSQLNEQASVFKKNSTTLKKHMKCKNLKMTILLVLVVVGVLAIILVPLILRAQD 253
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A6V2A733_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A733_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.800e-25 Identity = 64/165 (38.79%), Postives = 107/165 (64.85%), Query Frame = 2
Query: 599 EGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLV 1093
+ + + + AD + +T ++YP+R+A +L E+ +F G ++ +A SLT+ K S +C K+ D+ +VD+ SA+ DKVD VK++MQDNI ML N E+ + ++ ++ LNEQA VF+ +S+ L++QMKCK +KM ++L LL+ +L VI+VPL+
Sbjct: 105 QSTVHQVVYGADMDGLCLAVITGQKYPSRVAIQMLTELYGQFSQNFGLQAKSATTNSLTKKSKPMLSSICKKYSDLNNVDKASALIDKVDQVKISMQDNIAVMLKNTEQAETLADKSEQLNEQATVFKKKSTDLKKQMKCKNLKMTIILGLLIFGILAVILVPLI 269
BLAST of mRNA_F-serratus_M_contig80.19375.1 vs. uniprot
Match: A0A7R9Z383_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z383_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.440e-24 Identity = 62/170 (36.47%), Postives = 108/170 (63.53%), Query Frame = 2
Query: 599 EGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGDKSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQDNIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLLLALLVTILLVVIIVPLVNHFKN 1108
+ + + + AD + +T +YP+R+A +L E+ ++ + G ++ +A SLT+ K S +C K++D+ +VD+ S++ KV+ VK+ MQDNI ML N E+ + +++ +D LNEQA VF+ +S+ LR+QM+CK +KM L+L L+ +L +I+VPL+ KN
Sbjct: 124 QSEVHQVVYGADTDGLCLAVITGLQYPSRVAIQMLVELYGQYSEQFGLQAKSATTNSLTKKSKPMLSTMCNKYDDLSNVDKASSLIGKVEEVKVQMQDNIAAMLKNTEQAESLAERSDALNEQASVFKKKSTDLRKQMRCKNLKMTLILVFLIVGILAIILVPLIMKAKN 293
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 355.9 |
| Seed ortholog evalue | 1.4e-95 |
| Seed eggNOG ortholog | 2880.D8LQ56 |
| KEGG ko | ko:K08511,ko:K08515 |
| KEGG Pathway | ko04130,map04130 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000149,GO:0000323,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0006810,GO:0006887,GO:0006906,GO:0006996,GO:0007034,GO:0007041,GO:0008150,GO:0008333,GO:0009987,GO:0010008,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0030139,GO:0030659,GO:0030666,GO:0031090,GO:0031201,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045335,GO:0046903,GO:0046907,GO:0048284,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061024,GO:0061025,GO:0071840,GO:0090174,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852 |
| EggNOG free text desc. | SNAP receptor activity |
| EggNOG OGs | COG5143@1,KOG0859@2759 |
| Ec32 ortholog description | Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein |
| Ec32 ortholog | Ec-26_006070.1 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131,ko04147 |
| Exons | 7 |
| Model size | 1968 |
| Cds size | 669 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622932389.697032-UTR-F-serratus_M_contig80:353056..353498 | 1622932389.697032-UTR-F-serratus_M_contig80:353056..353498 | Fucus serratus male | UTR | F-serratus_M_contig80 353057..353498 + |
| 1690964284.9750943-UTR-F-serratus_M_contig80:353056..353498 | 1690964284.9750943-UTR-F-serratus_M_contig80:353056..353498 | Fucus serratus male | UTR | F-serratus_M_contig80 353057..353498 + |
| 1622932389.8253918-UTR-F-serratus_M_contig80:361455..361523 | 1622932389.8253918-UTR-F-serratus_M_contig80:361455..361523 | Fucus serratus male | UTR | F-serratus_M_contig80 361456..361523 + |
| 1690964285.0556087-UTR-F-serratus_M_contig80:361455..361523 | 1690964285.0556087-UTR-F-serratus_M_contig80:361455..361523 | Fucus serratus male | UTR | F-serratus_M_contig80 361456..361523 + |
| 1622932389.838853-UTR-F-serratus_M_contig80:361535..362324 | 1622932389.838853-UTR-F-serratus_M_contig80:361535..362324 | Fucus serratus male | UTR | F-serratus_M_contig80 361536..362324 + |
| 1690964285.066112-UTR-F-serratus_M_contig80:361535..362324 | 1690964285.066112-UTR-F-serratus_M_contig80:361535..362324 | Fucus serratus male | UTR | F-serratus_M_contig80 361536..362324 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622932389.7110832-CDS-F-serratus_M_contig80:353498..353603 | 1622932389.7110832-CDS-F-serratus_M_contig80:353498..353603 | Fucus serratus male | CDS | F-serratus_M_contig80 353499..353603 + |
| 1690964284.9879138-CDS-F-serratus_M_contig80:353498..353603 | 1690964284.9879138-CDS-F-serratus_M_contig80:353498..353603 | Fucus serratus male | CDS | F-serratus_M_contig80 353499..353603 + |
| 1622932389.7304783-CDS-F-serratus_M_contig80:359057..359243 | 1622932389.7304783-CDS-F-serratus_M_contig80:359057..359243 | Fucus serratus male | CDS | F-serratus_M_contig80 359058..359243 + |
| 1690964284.9976034-CDS-F-serratus_M_contig80:359057..359243 | 1690964284.9976034-CDS-F-serratus_M_contig80:359057..359243 | Fucus serratus male | CDS | F-serratus_M_contig80 359058..359243 + |
| 1622932389.7459805-CDS-F-serratus_M_contig80:359924..360047 | 1622932389.7459805-CDS-F-serratus_M_contig80:359924..360047 | Fucus serratus male | CDS | F-serratus_M_contig80 359925..360047 + |
| 1690964285.0099099-CDS-F-serratus_M_contig80:359924..360047 | 1690964285.0099099-CDS-F-serratus_M_contig80:359924..360047 | Fucus serratus male | CDS | F-serratus_M_contig80 359925..360047 + |
| 1622932389.764203-CDS-F-serratus_M_contig80:360486..360597 | 1622932389.764203-CDS-F-serratus_M_contig80:360486..360597 | Fucus serratus male | CDS | F-serratus_M_contig80 360487..360597 + |
| 1690964285.021197-CDS-F-serratus_M_contig80:360486..360597 | 1690964285.021197-CDS-F-serratus_M_contig80:360486..360597 | Fucus serratus male | CDS | F-serratus_M_contig80 360487..360597 + |
| 1622932389.7808201-CDS-F-serratus_M_contig80:361104..361167 | 1622932389.7808201-CDS-F-serratus_M_contig80:361104..361167 | Fucus serratus male | CDS | F-serratus_M_contig80 361105..361167 + |
| 1690964285.031779-CDS-F-serratus_M_contig80:361104..361167 | 1690964285.031779-CDS-F-serratus_M_contig80:361104..361167 | Fucus serratus male | CDS | F-serratus_M_contig80 361105..361167 + |
| 1622932389.8054361-CDS-F-serratus_M_contig80:361374..361455 | 1622932389.8054361-CDS-F-serratus_M_contig80:361374..361455 | Fucus serratus male | CDS | F-serratus_M_contig80 361375..361455 + |
| 1690964285.0424774-CDS-F-serratus_M_contig80:361374..361455 | 1690964285.0424774-CDS-F-serratus_M_contig80:361374..361455 | Fucus serratus male | CDS | F-serratus_M_contig80 361375..361455 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19375.1 >prot_F-serratus_M_contig80.19375.1 ID=prot_F-serratus_M_contig80.19375.1|Name=mRNA_F-serratus_M_contig80.19375.1|organism=Fucus serratus male|type=polypeptide|length=223bp
MARRITFIGVVRFTDRVLVAGYSPSEADDALIVKELMANPDTFVEPRRRY
TSEGNMFSIHFVADDENRVYNCVTDKEYPARIAFALLEEMQTKFLTKVGD
KSLTAREGSLTRTMKSSFSDLCLKFEDIRSVDRMSAVQDKVDVVKMTMQD
NIQQMLANEERLDQISQNADNLNEQAKVFQNRSSALRRQMKCKAIKMWLL
LALLVTILLVVIIVPLVNHFKN* back to topmRNA from alignment at F-serratus_M_contig80:353057..362324+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig80.19375.1 ID=mRNA_F-serratus_M_contig80.19375.1|Name=mRNA_F-serratus_M_contig80.19375.1|organism=Fucus serratus male|type=mRNA|length=9268bp|location=Sequence derived from alignment at F-serratus_M_contig80:353057..362324+ (Fucus serratus male)
TGACCATACATACATATGAGTACCAAAGAGCGTTCGGAGCTGCGCCGACG
ACTTTGGCTGCGCGACTCATGCGCGCGTTGCGCGCGCGAGTTTTATTTCG
CGATCCAGTCAAACAGCCGTTCCGCGGGAGAACCATTCGCCGCTCTACTA
ACCCTATCATCTCCGAGGCGGTCGCACGCAACAATCATTACCCAACTCTT
CTTCAGTTGCCTTAGCAGCAATCCTACTGAGGAACTTTTCAGTGTTCGAA
GATAGGTGCATACCCTCCAGCATAGATCGGTTCGGTAGGTCGATCGGAGA
AAGTACCAGTACTCAAGGTCGACACCCCTCGTACTTTTACGTGTACAGAG
TGTCAACAAGCTCTTGACTGTGGTTCAGGCATATCTACAGCAGAGCAACT
TCGAACGTTTGACAAGAAAAGGGGCCCCGTGGGAGCGGGAAAATGGCGCG
TCGAATCACCTTCATCGGAGTCGTGCGCTTCACCGACCGTGTGCTCGTGG
CGGGCTACTCTCCCAGCGAAGCCGATGATGCCCTGATTGTCAAAGAGGTG
AATACCGTCAAAGAACACGATGATTGTGTACTGTCTGTAGTTATGTGCAC
GGAACCTCTATGCAGCTCGGTTATATCGCGTTCGAATTTTTTGAACAGCA
GTTTTCCACAACGATGTATAGTAAGGTGTGTCGTAGCCTCAGAAAACGAC
TTATAATCGAACAATATATACTGCAGTATGGCACTATTATACTGAAGTAC
CAGAGAAGTTGACCGACTCTAAAAGTACAGCAGTCACGTAGCAATACTAT
TATACTGTAATTTTTCAAGAAAATCTGAACGCATCTATCTACTACTACTC
TGTACCGGTAGACATTTTGAGCACCACCCAGTCGGGGGAAAAAATGTCAA
AACGTTTAGGTGGGATCGTAGGCTGCATAGACAAAACCTTTTCATGGCAT
TTAAACGGGTTCCTTGATGGTAGTAACATTGGGTCATCAGTGTCATGTCG
GGGAGAAACCCACCGTTATACTTGTACACTTGAACTAATCGCCATGCCGG
AACACCAAACGAAACAATTTTTGTTGTGGACAAGTGTCATTAGTATCTAC
GAGTAGTCAACAAGATTACGGTACAGCAGTACCCGTAGAGCTACTACATA
CAGTACCAGAAGTTTCTCCGACGCCGTAAGACGACTTTGCTCCACAATGT
TTTGGAAAGCCTGGAAGTATTGGAAAGTTTGGAAAAAAAGTCGGAATCGT
GTTGATGGAATTTTAGAACGCGTAATCGTGTTGATAGATTGTTGATTGAT
TGAATTCGCACATTGACTAAGCTGATCTCGTCAAAAATCCAGCCCGTGGT
CACAAGTTAGAAAAACACCATTCGGAAGGAAAGAACGTACGACGTACTCT
CCATACGAAGAAAATGCGGAAATGGTAAAAAAAAAATACTCGGAAAAAGC
GACATCATCATCATCTTGAAATAAAAATAAACCAAAGGGAAAAGAAAAAG
AGAGACACGCGTGTGGCTATTGGGGCGCCTGCATATGTATGGTCACACAT
ATAGCAAGAGTATGGATCAACCGGGTAAGGTAGCCAGTCCTGCACGGGGA
CAGCTGAACAGAAAAAATGAATATTTCCTTGTCCGCATTCGTGCCTGAGA
ATTTGGTCTTGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCT
CATCTCCATATATAATCTCAGGCTGAATGTGGTGCTTACTTACGGGATTC
CTCCCGAGTTCCGCGACGGCGTCCATATGTTATTTAGACCCGCCTACGAG
TTTACCGGGTCACGCAATTGCGTACCAATGGCGTCCACTGCCCAGAGTCC
GCCGGCACGGGGCCAGTAAAGCTCAAGGTAGTTCCGAACGAGTGCTGCCT
TGGCAGGTCACCATGGACCATTTAATATTCGCCTCTCTTTCCCACACCCA
CTATTGGTATGAAGTGGGCATGTTGACAGTGCCGGCGGCATATCGAAGGA
CGATCGAACGAAGGGCCGCGGCTTCAACGAAAGCATTGAGACGAAAACGA
AGCAAAACACAAACAACAGTGCCCTATTTACAGTTCAGAGTGGAACAACT
TCCCGCAAAACACGGGGGATGCTCAAAAAGTCTAGGTGCTGTTCGGATTT
TTCTTTAAACAGTGCCCTATTTACAGTTCAGAGTGGACGTTTCGGTACAA
CTTCCCGCATGGCGGTATGACGCCATGGTGCGAATGCTCGGAAGGTTTGT
ACTGGGATGCGTTATTCATACGGAGTAATTCAGATTTAATAAAAAAGGAA
TGTTCACAAATTGGAAAATCATATTCGTACTTGCACTCTTGTTTCGTAGA
CGGTTCATGCTGTCGCAGTCATAGTCAACGACACTGTACAGCGCCGCTCT
AAGCCTCCCATATGTAGATACAAGCTCTTCGTCCGATGGGCTGGCTACCC
CTGTCGAACATGGGCTACACCGAGTTCTAGCCCGCAGTATCGATGGTGGC
TGGGTTGTGTCGTCCCCTCATGGAGGACTACCGCAAGCAGTATAGAAAAT
GGGCCTTCGGGGTGGTACCGCTCGATCGATGGAGCATGTTAGTCAACAGA
GGTCAGATGAGGAGTTCGAACGTGACCCCGGGAGGCGTAGTATTTTCCAA
ATTTGGATATTCCAAAACTTAAGTCCAACATGCATTCACATTTTTCTTTA
AACGCAAAAGTTTGGAACGGCTTTTTCCAAAGTTTTGTAAAGGCTGCGGA
AGGGTTTGCGGGGGTTTTTTCCCAAGTTTTGGATTTTTCCTACACTCGTT
TAGACCGACACTTAGTATAGGTAGCGTTCTTTAATTAAGATCGGGAGAAC
TATAACTCGTATTATGTACTATATACTATTAATACCTGTAGTTGGATTAA
TATTAGGACGGGTATGTTGACGGCAGTGTGCGAAAGGTTCGTCGTGAATA
CGAGCTGGTCCGCGACGAATCGTTATCTTCACCTCCCTAAAAAATAACCA
TATGTTGGCGGAAATGATGTCAAGACCTCTTGTCTTGAATTTAAAGTGGG
GTTTCTGGTACATACGCACACGCATTTTGTGATGACCGACAAAAAACCAT
GCCTACCACGGAAACGGCTGACTCAACCTCGACGATGCAAATTTTGGCGT
TTGGCTCAGTGTGGTCTAAATCCCGAGTTTTTTTTATGTCAACGGAATGA
AACAAAATTTTGCACACGTGTTCGTCTTCGCAGTGAGCGTTGTCGAAGAC
GTACTATCATGGGACTGGTAGACTATACGGTACTTTCAGCATGCCCACTT
CATACCAATAGTGGGTATGGGAAAGAGAGGCGTGTATTATTTGGTCCATG
GTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTACCGGA
CCTGTGCCAGCGAACTCTCGGCAGTGAACGCCATCGGTACGTATTTGCGT
GACCTGATAAACTCGGGACTGACCCGACCCGATGGCGGATAGCGGTTTAA
AATAAGTATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCTTAAGTAA
GCACCAGATTCAGCCTGAGTGTGGAGATAAGCAGGCTGACGCGGGACAGG
ACTGCCGAACCCGTCTCGCGAGACCGAAATCTCAGGCGCGAACGCGGACA
TTGAAATATTAATTTTCCCGGTTGAGCTGACAACGAGCAGGATTGGCAAC
CATACCCGGTTGATCCATACTAATCTTGCTATATGTGTGACCATGTAGCA
GTGGACTTGTAGGTTGGGAAGGCGACCGTTTGCCAGCCTCAAAACGCCGA
CAGGGTCGAAACAGTAAAGCTTCTGTCAGTACGGTGGGCACGCGAGATTG
ACGCGTCTCGCGAGTCACGAGAAGATGGGTCGCAAGTAAGGTCACGCCTT
CCCTTCCCGCCACACTTGAGCCGTAACCTCGCTATTATAGAAAATGCAAA
TACCATATTTTGACTGGTATAAACGCATGCGTTTCGCCCTTTTGTTCCGA
AGTGCTTTACTATTACTATAATAGTTTGGTATAGGTACGGGACTGAAGAA
ATCGTCTCGCGAGACTAGATTTTGGCACTGTTGTGACCACGAGCGGGATT
GGCAACCTTACAGTTGATCCATACTCTTGCTAAATTGTAACAGCAGTTGT
GCTTTTCCGATTTCGGTTTTCTCAAGGATTGCTGCGAGCGATCCTGCTTA
CGGTTGTGTGGTCGTATTATAGTTTAATTGAGTTAATTGTATTAGAGTTT
CAAGAGTTTTATAAAAGCAGGAAGGATGTTTATGTTCTCTGGTAAAGGGC
ATTATCGGACTTGACGCTTTCTTTCCCTAATATACTGTGCCCAAAAGGAT
TAGGCTCTACTTGTTAAGAGCTGCAGGAGTCTGTACTGCTTGTAGTGTGG
AGAGTAACGCTTGTCCCCGTCACAAACATCATACATCCAGGGGCGTAAGC
AAGGTCGCGGGACCCTCTTGATCTAGCATAGCTGACACTTGTGGGCTTGA
GATGCCGAGGTTAAACGGTTGGGCGTCTAAACAGAGAGAATATGATAAAG
TCGTACAAAGCTCTAAAGAGAAAAAAAGCGTGTCCACGCTATCAATACTG
TATCGCTATTTGATTGGTCTGTTATATTGTACTCGCTGTTTGATTGGACT
GTTATACTGTACTCGCTATTTGATTGGTCTGTTACCGCCACTAATAATAC
AAATAAAAGGGGATCGATTGAAAATACCTTCTCACGGAACTTGAGATACT
GCAGTGGGTGTTGGGCGCCTATCATATTATTAGTTACGTACTGGTATAAA
CTTCGAATCCGATCTAAAACTTTTAGACATTTTTCAATAAACTCTACTAA
TAGATGAACATTTTGAAATTTGTAGTCATTTTTGGGGATGCTCAGAAGGT
CTAGGTGCGTTATAATATTTTCTTCAAATTTAGTTTGTCGATGAGCCTCA
CGGGGGGCGGGCACGAGACGTTCCACCTCTTTTGTCTGTTGTTGTATCTA
CATTTTTTTTGTGTGAGGAGGTTGGTCTCTGACTTTGAGGAGCTGGGGGG
ATAGATTGCGCGCTCTGTCTAACCCGGGGTAGTATGAGCTTGCTCGTCGC
CAGCCGTGCTCAGGGGGGCACTTCTCCTTGTGTCGTGCTACTCGTACGAC
GTGGTTCCGTTCAAAAGGGCAGCTATAATAGATACAAGCATCGATGTTGT
ATCCGCCTTTTATTTTTAATACATACATACTGTGTACCGTGTTCCGTACC
ATGAGTGTCAAGGATCTGATCGTACCGGGGCAGTCCTTCCATCAAATACC
ATCCCGTCTGGTTTGAAGTGGATACACCGGCATAGATGTTCCCGTGGAAT
ACCAGGTATATTAACGAACTAGGTACCAGGTATATAATAGCGGTAGCGAC
AGGGGTTTTGTGGTGGAACACCGGGGTACGGCACGCGTAGTAATTCGGGG
CCAAATAAAAGGCTCAGAACATCTAAAAAATGTACAAGTTTTGTAATACG
GACGAAAAAATGGTTAGATTTTTCAATTTAAAAGTGTTGTCAGGGATCTC
GAGCACCACCTTTAGATTTCGCGAGCATTGTGCTTCGTTTTTTTGTTTTG
TTTTGTGTGTGTAAATCGGACCAGTCACCAACCTCAGACTCATTATATTA
ATAATTTTATTGTCAGGCATGGTGCAGTGCTACTAATATGTATATACATA
TATATATATATGTGATAAGACTGCCCCCGTTTGAAAAGATCAAACTTCTG
CTCACCGATTTCCGAGCTGCCGTTTTGACAGCATACCTTACTTGTACGAC
TGTTAAAATAGTAGCAGTAGTTCGTGTAAAGTTGTGTATAGGAATTAAAG
TTAAACTCTGGAAGAACCGCACGCGTTTTGGAAAAATCAATTTATTAATG
TAGTAAAATTAATGTCAATGTACTCTCTAAACAGCATACGGCACGGACTT
CGCGATCCAACCCACTGTTTTGCACTTGACGAACGTTCATTTTCCGTGCA
GCTCATGGCCAACCCGGACACGTTCGTGGAGCCTCGCAGGCGGTACACCT
CGGAAGGGAACATGTTCTCTATTCATTTCGTGGCGGACGACGAAAATCGC
GTCTACAACTGCGTCACGGACAAGGAGTATCCCGCCAGAATCGCGTTCGC
CCTGCTCGAAGAGATGCAGACAAAGTTCCTCACCAAGGTGGGTCAGGGGG
CTATGACGGGCAAGGTACTAGAACCAGAGAGAATTTACTGTAACCGTCCA
TTTGCCGTTGTCGATTTGCGTCGCGGCACGAACCGTTGACACTTTCGCAG
GCATGATTGATCCTTTGAGGTGTTGTGATTGGTACTACCTTTGAGGTGAT
CGTGATTGGTACCTCTTAGGTGATGTGATTGGTGCCTCTGACTTATAGCC
GATGGACCCCATCATTACCATCCTGCCTGTGGTCACTAAGGATATCATCA
TCTCTCCTCGGTTCACGCCTCATGATTTTACATCGCGGTGCAAGTTCAGC
ACTCTTACATATCATCAACCAATGGTTGAATTTTCCGTACTCACGTTCCA
ACGCTTTCCGTTACGGAAGAAAGAACGCAAACACTGCTTTGACGTGAATC
GAACTCACGACTTCCGCACTAGCGGGTGTGCAGGTCATCTACTAGACCAC
TCGAGCGAAGAATATATATTAATATTTATTTAAAGTATTTTTGGGGGAGA
TGTGATTGGTAACTCAAGGTGTGACGTTGATTGGTGCCAAGATCAACAAC
GCTGAGGTTCCTTTCATGGAGTTCCTTTGTGTACACTATTAGTAGTCGTG
GTGTTAAAAAAGATGACCTGCCTCGACTCTTCGCGCTTATCCCATTTATT
TCGACCATTCACTACCAGGTGGGGGACAAGTCTCTCACGGCAAGGGAAGG
CAGCCTGACGAGGACTATGAAGTCAAGCTTCTCCGACCTTTGCCTGAAAT
TCGAGGACATCCGCTCCGTCGACAGAATGTCCGCCGTGCAGGCGCGTGCG
TTTGATAGATACGAGTATACAGTACCCTTTGAGACGCTTATCGGCAGGAG
TAGCCTCTCATTCGAGTCAGAGCTGACGAGTGTGCTGAGTGCAACAAGAC
GAGTCAAACCCCTCTCCCATAGGTTTGACCGATTTAGCTTTGATCCTGGT
AGGAAACTTCGCGGCCGAGCTTTCATGATATTTTATACATTTGTGGGTAA
TCACGTACCGGTACCCTTAAACTCAGGGAGTCGTTGGATATTTTTTGTGC
TGCGGCGGTCTGGAGTTGTAGGAGTGCGCAGCAACCATGGTTTTTGCTTG
TTCTGGCGGGAAGGCGTTTTGTTCCTACCTTTTGTTGGTCATAACCCGTA
CGATGAGACCCGGCACTCAACTTTACCCCTACCTAATTTCCCCCGCGTGG
AACATGGTTGTATCACCTCATTATCAACAGGATAAGGTGGACGTGGTGAA
GATGACCATGCAAGACAACATCCAGCAAATGCTTGCCAACGAAGAGCGGC
TGGACCAGATCAGCCAGAACGCAGACAACCTGAACGAGCAGGTCGGTTTC
GTTGTGCTTGAATCGGAGCGCTTTATATGTCGTACGCCACGGAGAGACCG
TCCTGTAACGGTTGACTCTAGTGGCCGTATGCGTTGCTCGGAAGCCAAGG
GGTCGGGTTGGAAGCGCAGGACCCAGTGGTACGATTGTGGTTTTTGGTCA
GGCGCGATCCTAGGTTTTcTTTGGTTGCGCGATCTTAGGGGTTTTTTCGA
TCTTAGGTTTTTTTGGTGGCGCGATCTTACGTTTTCTTTGGTGGCGCGAT
CATGGCTGTCGTAGTTCTAGTCAGTAGCTCGTGGGTGATGGGACAGAATG
GCGTCAGCATCGACGAGAGCCAGCAGTGAACTTTTGGCTTAACATCCTTC
GCTGGTATCCTCACCAATGTGTCAAGTAACACTATTTGGTTTAATGTCCA
TGACTGGACTCACACCAAGCACCGGAAAAGCCTTCCTTTATGTGCAATTT
GTTGACTTTGACTCGTGACTCTTGTGTTGCTCCTGCGGTACAAAACAGGC
GAAAGTTTTCCAAAACCGGTCATCGGCGTTACGGAGGCAGATGAAATGCA
AGGCCATCAAGGTACGCTACTCGTGAATATCTCGTCTTCACAGCAGTGGA
AACAATTGCCGTTTCATCATCGATCATACGCTGAAGGGTTTTTAAAGTTT
AAAGGCGTTTTTCCGGCGTGGAACGCACCCTTTATTTTGTGGTCTAATGA
ACTATTTTTACCCTGGTCTTGAACCCATCGCCTTCCCTATTCGTCTCCGG
AATGCGGTGCGCATGCAGATGTGGCTGTTGCTAGCCCTGCTGGTCACCAT
TCTTCTGGTCGTCATCATCGTGCCACTCGTGAACCACTTCAAGAACTAAG
GCGGCTTACGCATAATGGTATACGAGTATCTTATACAAAACAGCGCAATG
ATGTGGATCTTCGGCAAGCCGACTCATACCGTTGGCCTGGTTTGACTCAC
TGTTGGATGTTTGGCTGAGGTTTAAGACTTGATTGCATCGCACCGTAGCA
TGACATTGTACCAAGTGAGTGCACGCGTAAAATTCGGGGTAGTTCGTGAA
ACGGGTTTTACCCGCCCCTCTCTCCTCCTTTGCAGTCGATTGACGTACGA
TAGATGACAGTTGGTAGCAACGGGAGGCATAACGTGCGGTGCGCTTTATT
TTGGCGGGTGCGCGGACGGAAGCGCTCAGAGAACGATGGCCCATACTCGA
GAGTTTGCTGTCTGGCGGTCGTATCAAGATGAGGGGAGTCATTTGGCTCG
ACCTAGTGCCACCGATTTGCGCTTTTAAGCACCGGACAACTCCGCTTCCA
ACGCTCCGGGCGTAGGCTCTTTTCTATGCCGTGTATATTTTGAGGGCCGA
CGCTGTCAAATCGATTACAAGTACTGCTGTAGTAGGTTTGTTCGCGCTAC
TATATAGGCTACTAATGCGAGAGTTGGGTCAATCCGTGTGTGGTGTAGCA
GTACAGGGTAGTCGGCATGGAGGAGGACTTGCACAGCCCAGGGGCGGCAA
CTCCCGATTGGCTAGTTGAATCTGTTGGGACGTTTCTCGAGTCAAACGCC
ACGTCAAGTGTTCAAACCTGTGTTTCGCGTTTTGATTCTCTTCCATAGTA
GTGGTTATTTTTTTTCTATTCAAGCGCCTGTGAAGAGGACACGTGCTACT
AGCGATATGTAAAAAACTGCCTCGTTGAAGCCATGCCTTGCTATCGATCC
ACGGTAGATGGATCACAA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig80:353057..362324+ >mRNA_F-serratus_M_contig80.19375.1 ID=mRNA_F-serratus_M_contig80.19375.1|Name=mRNA_F-serratus_M_contig80.19375.1|organism=Fucus serratus male|type=CDS|length=1338bp|location=Sequence derived from alignment at F-serratus_M_contig80:353057..362324+ (Fucus serratus male)
ATGGCGCGTCGAATCACCTTCATCGGAGTCGTGCGCTTCACCGACCGTGT
GCTCGTGGCGGGCTACTCTCCCAGCGAAGCCGATGATGCCCTGATTGTCA
AAGAGATGGCGCGTCGAATCACCTTCATCGGAGTCGTGCGCTTCACCGAC
CGTGTGCTCGTGGCGGGCTACTCTCCCAGCGAAGCCGATGATGCCCTGAT
TGTCAAAGAGCTCATGGCCAACCCGGACACGTTCGTGGAGCCTCGCAGGC
GGTACACCTCGGAAGGGAACATGTTCTCTATTCATTTCGTGGCGGACGAC
GAAAATCGCGTCTACAACTGCGTCACGGACAAGGAGTATCCCGCCAGAAT
CGCGTTCGCCCTGCTCGAAGAGATGCAGACAAAGTTCCTCACCAAGCTCA
TGGCCAACCCGGACACGTTCGTGGAGCCTCGCAGGCGGTACACCTCGGAA
GGGAACATGTTCTCTATTCATTTCGTGGCGGACGACGAAAATCGCGTCTA
CAACTGCGTCACGGACAAGGAGTATCCCGCCAGAATCGCGTTCGCCCTGC
TCGAAGAGATGCAGACAAAGTTCCTCACCAAGGTGGGGGACAAGTCTCTC
ACGGCAAGGGAAGGCAGCCTGACGAGGACTATGAAGTCAAGCTTCTCCGA
CCTTTGCCTGAAATTCGAGGACATCCGCTCCGTCGACAGAATGTCCGCCG
TGCAGGTGGGGGACAAGTCTCTCACGGCAAGGGAAGGCAGCCTGACGAGG
ACTATGAAGTCAAGCTTCTCCGACCTTTGCCTGAAATTCGAGGACATCCG
CTCCGTCGACAGAATGTCCGCCGTGCAGGATAAGGTGGACGTGGTGAAGA
TGACCATGCAAGACAACATCCAGCAAATGCTTGCCAACGAAGAGCGGCTG
GACCAGATCAGCCAGAACGCAGACAACCTGAACGAGCAGGATAAGGTGGA
CGTGGTGAAGATGACCATGCAAGACAACATCCAGCAAATGCTTGCCAACG
AAGAGCGGCTGGACCAGATCAGCCAGAACGCAGACAACCTGAACGAGCAG
GCGAAAGTTTTCCAAAACCGGTCATCGGCGTTACGGAGGCAGATGAAATG
CAAGGCCATCAAGGCGAAAGTTTTCCAAAACCGGTCATCGGCGTTACGGA
GGCAGATGAAATGCAAGGCCATCAAGATGTGGCTGTTGCTAGCCCTGCTG
GTCACCATTCTTCTGGTCGTCATCATCGTGCCACTCGTGAACCACTTCAA
GAACTAAATGTGGCTGTTGCTAGCCCTGCTGGTCACCATTCTTCTGGTCG
TCATCATCGTGCCACTCGTGAACCACTTCAAGAACTAA back to top
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