prot_F-serratus_M_contig80.19373.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig80.19373.1
Unique Nameprot_F-serratus_M_contig80.19373.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length91
Homology
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BLAST of mRNA_F-serratus_M_contig80.19373.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 7.080e-12
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 0 
Query:   21 LVTQATSTGTRWVFLREPSAAYLERFLERQDTENAATNHPYAGFTDPAASRGDAAXXXXXXXGFQERT 88
            L+ +  S+GT + F REPSA+++ R+LERQDT  +  NH +AGF+D AA+     XXXXXX GFQERT
Sbjct:   13 LLAEVISSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L025_9PHAE7.080e-1254.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.787
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig80contigF-serratus_M_contig80:339511..349405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig80.19373.1mRNA_F-serratus_M_contig80.19373.1Fucus serratus malemRNAF-serratus_M_contig80 339321..349411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig80.19373.1 ID=prot_F-serratus_M_contig80.19373.1|Name=mRNA_F-serratus_M_contig80.19373.1|organism=Fucus serratus male|type=polypeptide|length=91bp
MMIAIGTNAQRGLLLLILVGLVTQATSTGTRWVFLREPSAAYLERFLERQ
DTENAATNHPYAGFTDPAASRGDAAAPPPPPPGFQERTVR*
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