mRNA_F-serratus_M_contig101.201.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 3.240e-23 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPS----------NNESVEVEPSHDELKRKLITSFTYRKEHNDIVWLTR 416 CCILHNMLH +DG+D EEDVDW G GLHD +T T S G S ++E+++ P+H ELK++LI SF+YRK HNDI WL+R Sbjct: 74 CCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSR 170
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5K5C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.870e-21 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPS----------NNESVEVEPSHDELKRKLITSFTYRKEHNDIVWLTR 416 CCILHNMLH +DG+D EEDVDW G GLHD +T T S G S ++E+++ P+H ELK++LI SF+YRK HNDI WL+R Sbjct: 395 CCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSR 491
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.670e-17 Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHN-DIVWLTR 416 CCILHNMLH +DG+D+L E+ +W G+ ++ P DC SVG N+ ++E H KR+L TSF YRK+H DI+WL+R Sbjct: 80 CCILHNMLHTFDGMDQLVENTNWISSAGVGATLA---TEPEADCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIIWLSR 164
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.480e-16 Identity = 48/103 (46.60%), Postives = 56/103 (54.37%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGG------PSNNESVEV----------EPSHDELKRKLITSFTYRKEHNDIVWLTR 416 CCILHNMLH +DGLD EE+ DW G G HD+ P TD +SVG P E E P H ELKR+LI SF +RK+ NDI WL+R Sbjct: 267 CCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHD---PLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 366
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.600e-16 Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVG-------------GPSNNESVEVEPSHDELKRKLITSFTYRKEHNDIVWLTR 416 CCILHNMLH +DGLD +E+ DW G G HD+ +T T S G G + E P H ELKR+LI SF +RK+ NDI WL+R Sbjct: 156 CCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 255
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JTS2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS2_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 3.320e-16 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHN-DIVWLTR 416 CCILHNMLH +DG+D+L E+ +W G+ ++ P +DC SVG N+ ++E H KR+L TSF YRK+H DIVWL+R Sbjct: 311 CCILHNMLHTFDGIDQLVENTNWVSSAGVGATLA---TEPESDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 395
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.030e-15 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHN-DIVWLTR 416 CCILHNMLH +DG+D+L E+ +W G+ ++ P DC S G N+ ++E H KR+L TSF YRK+H DIVWL+R Sbjct: 244 CCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLA---TEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 3.120e-15 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVG-------------GPSNNESVEVEPSHDELKRKLITSFTYRKEHNDIVWLTR 416 CCILHNMLH +DGLD EE+ DW G G HD+ +T T S G G + E P H E KR LI SF +RK+ NDI+WL+R Sbjct: 534 CCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSR 633
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JMK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK5_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 2.150e-13 Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = -3 Query: 198 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPS----------NNESVEVEPSHDELKRKLITSF 416 CCILHNMLH +DG+D EEDVDW G GLHD +T T S G S ++E+++ P+H ELK++LI SF Sbjct: 64 CCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESF 146
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 3.510e-12 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 165 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHD-SITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHN-DIVW 416 CCILHNMLH +DG+D+L E+ +W G+ S+T+P D SVG N +VE H KR+L TSF YRK+H DIV+ Sbjct: 199 CCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEA----DSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.201.1 >prot_F-serratus_M_contig101.201.1 ID=prot_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=polypeptide|length=110bp MRKLFGRARPASVHVSIVHIFMHPCLESKAYLVSQTMSLCSLRYVKEVMSback to top mRNA from alignment at F-serratus_M_contig101:799578..799995+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig101.201.1 ID=mRNA_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=mRNA|length=418bp|location=Sequence derived from alignment at F-serratus_M_contig101:799578..799995+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig101:799578..799995+ >mRNA_F-serratus_M_contig101.201.1 ID=mRNA_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=CDS|length=660bp|location=Sequence derived from alignment at F-serratus_M_contig101:799578..799995+ (Fucus serratus male)back to top |