prot_F-serratus_M_contig1257.1919.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1257.1919.1
Unique Nameprot_F-serratus_M_contig1257.1919.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length419
Homology
BLAST of mRNA_F-serratus_M_contig1257.1919.1 vs. uniprot
Match: A0A6H5KRK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK9_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 3.030e-48
Identity = 80/148 (54.05%), Postives = 110/148 (74.32%), Query Frame = 0
Query:   74 ASGADAISSEDFNNTCVASSPCELELGIAFGNPWLTVKTGDVKYFQVPGTPQLQPSEVTITLAYGEVEVYASSGGKTPTAGDSDWAGNGVVRLRGWNVPHDGDTLTVAVNAT--SDSKYRVLAASDEDVLPLENGLPIRMIQDEGEMR 219
            ++ A   ++E     C  + PC+LE+G AFG+ WL  + G++ YF+V GTPQ+QPSEV +TLAYG+VE YASS G+ PT  +SDW+G  V+RL GW+VPH+GDT+ V + AT  + + YRVLAASDEDVL LE+G+P++M+QD  EMR
Sbjct:   37 SADATVEAAEAVGLRCPVAVPCKLEMGTAFGDTWLRAEDGEIAYFEVAGTPQVQPSEVIVTLAYGDVETYASSSGREPTPSESDWSGGRVLRLPGWSVPHEGDTVVVMIKATGTAGALYRVLAASDEDVLRLEDGMPVQMLQDASEMR 184          
BLAST of mRNA_F-serratus_M_contig1257.1919.1 vs. uniprot
Match: A0A4D9CYF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYF0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.410e-26
Identity = 97/343 (28.28%), Postives = 150/343 (43.73%), Query Frame = 0
Query:  110 VKTGDVKYFQVP-GTPQLQPSEVTITLAYGEVEVYASSGGKTPTAGDSDWAGNGVVRLRGWNVPHDGDT-LTVAVNATSD-------------------------------SKYRVLAASDEDVLPLENGLPIRMIQDEGEMRYFSIDIEENATDLLVSMNSYYGDPDMYMSLYELPDVNETANHVLPNKKNFTWQSMSFGADTIQVQGEVLSDKCVPNP--GSACTYAVGVLAVSNSSYTIQASLRSGWRNLTHISLGEPHASRLDKGAFDYYAVSIPPAPSDDPWATVMITVTPTKGGLQDVYVTTDRTREPGPTDYAVKGENWAGSMAVMFSETVPGFCT 417
            V  G + YF V  G       E+ +T+  GE ++Y S   +     D   A  GVV     +   +GD  LTV  +   D                               S++R+LA + +  L L +G+ +R         ++ + +     DL +++    GDPD+Y+ +   P V      + P K N TW S SFGAD++ VQ   L   C P+P  G  C   VGV A S +S++I ASL +GW N + +  G P +  + K A+ YY   IP          V IT+ P     QD+YVT    +EPG  ++  +  +W+ +  V+ +   P +CT
Sbjct:  395 VHNGAMAYFAVRVGGADYTDVELVLTVTSGEADMYVSDSYEGRPRID---ATTGVVSSYSLSSAQEGDDRLTVKHSLFKDCGARAGRDGKGXXXXSGCFAIVGVLGRQFASSEFRLLAKTLDSTLTLHDGVAVRDTVAAKAYAWYKVLVVNPQLDLTLALTPLSGDPDLYVGV---PPV------MRPTKGNHTWASRSFGADSLTVQAAELRGHCEPDPSIGVGCPVYVGVYAWSRASFSIMASLNTGWLNPSVLIPGLPQSGEVAKSAYHYYQFRIPAGVDGAVEPLVRITLLPEDDTDQDLYVTFSAEKEPGKENFDARSTSWSDNDEVLLAPGGPHYCT 725          
BLAST of mRNA_F-serratus_M_contig1257.1919.1 vs. uniprot
Match: A0A6H5KQB6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQB6_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.600e-26
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0
Query:  323 GWRNLTHISLGE-PHASRLDKGAFDYYAVSIPPAPSDDPWATVMITVTPTKGGLQDVYVTTDRTREPGPTDYAVKGENWAGSMAVMFSETVPGFCTD 418
            GWR+   + LG  P +S L +G FDYYA+ I PAP ++PW ++++T TPT GG QD+Y TT+R+REPGP DY VK  NW GS  ++FSET PGFCTD
Sbjct:   15 GWRHPQQLLLGNHPQSSFLVEGNFDYYALLITPAPEENPWESIVVTTTPTGGGQQDLYATTNRSREPGPEDYDVKSSNWVGSSTLVFSETAPGFCTD 111          
BLAST of mRNA_F-serratus_M_contig1257.1919.1 vs. uniprot
Match: A0A813C0F4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C0F4_9DINO)

HSP 1 Score: 70.5 bits (171), Expect = 1.550e-9
Identity = 43/174 (24.71%), Postives = 86/174 (49.43%), Query Frame = 0
Query:  178 LTVAVNATSDSKYRVLAASDEDVLPLENGLPIRMIQDEGEMRYFSIDIEENATDLLVSMNSYYGDPDMYMSLYELPDVNETANHVLPNKKNFTWQSMSFGADTIQVQGEVLSDKCVPNPGSACTYAVGVLAVSNSSYTIQASLRSGWRNLTHISLGEPHASRLDKGAFDYYAVS 351
            + +AV  ++ S++ +  ++   V  L++G P          RY+   + +++ DL  ++  + GDPD+++  Y   D N+  N   P   N+ W  M+FG D + +  +     C P     C Y V V +VS+SS+T+ A+L    + +  +  G+P  S + +  + Y+ ++
Sbjct:   34 MLIAVYGSTTSEFTITYSTSASVSVLQDGQPQDGYVARFHYRYYLFAVPKDSKDLTFAVTPHSGDPDLFVKKY---DENDPGNK--PTMWNYDWAGMAFGDDMVHIASDD-PKACTP----PCKYYVAVFSVSDSSFTVTATLSE--QRVIRLIDGQPQTSNVAQNQYRYFQLT 195          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1257.1919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRK9_9PHAE3.030e-4854.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CYF0_9STRA1.410e-2628.28Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6H5KQB6_9PHAE1.600e-2656.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A813C0F4_9DINO1.550e-924.71Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..418
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1257contigF-serratus_M_contig1257:117063..124038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1257.1919.1mRNA_F-serratus_M_contig1257.1919.1Fucus serratus malemRNAF-serratus_M_contig1257 117063..129400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1257.1919.1 ID=prot_F-serratus_M_contig1257.1919.1|Name=mRNA_F-serratus_M_contig1257.1919.1|organism=Fucus serratus male|type=polypeptide|length=419bp
LGESSCPASVPGLASSSRPPTFRGYALQCSGEIHSVMLPSNGTLVRDMDA
RRFYPHRVVLVSTVLLVRTLLLWASGADAISSEDFNNTCVASSPCELELG
IAFGNPWLTVKTGDVKYFQVPGTPQLQPSEVTITLAYGEVEVYASSGGKT
PTAGDSDWAGNGVVRLRGWNVPHDGDTLTVAVNATSDSKYRVLAASDEDV
LPLENGLPIRMIQDEGEMRYFSIDIEENATDLLVSMNSYYGDPDMYMSLY
ELPDVNETANHVLPNKKNFTWQSMSFGADTIQVQGEVLSDKCVPNPGSAC
TYAVGVLAVSNSSYTIQASLRSGWRNLTHISLGEPHASRLDKGAFDYYAV
SIPPAPSDDPWATVMITVTPTKGGLQDVYVTTDRTREPGPTDYAVKGENW
AGSMAVMFSETVPGFCTD*
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