prot_F-serratus_M_contig790.19186.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig790.19186.1
Unique Name	prot_F-serratus_M_contig790.19186.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	313

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig790.19186.1 vs. uniprot
Match: A0A6H5JAC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC9_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 3.520e-90
Identity = 146/268 (54.48%), Postives = 168/268 (62.69%), Query Frame = 0

Query:   61 EVGFPGLQVVAPSSGLHGACEVCGAPSIRQLELGRRLCEVC---VNAGELEKPSRVRMP-------------WTVAVTSAREIALCDEHVRTLKWTGAVMLGTSLLLLALPIAAWRGFDFSLVSTLSPWIGIYLPVPLGLLNGVWCLHCAWRGCVRHEGTGSCVSRAGLCGTAWGCSGPSCALNLGLDLGLLITALLAALPAGSSAAGCGYECYVILCFPCAPHGGQGAAACMVLAALGLALGVGTKMWVMTSALRKDPFGRVDFLPW 312
            +V  PGL+V AP  GLHGACE CG PS+  L  G   CE C   +  GE     + + P               VAVTS+R++AL DE  + L W G  M              WRG  FSL S LSPW+ IYLP+PLG LNG W +HCA  G +RH  TGSC SR G+CGTAWGCSGPSCALNLGLDLGLLITA+LAALPAG+SA GC Y C+ +LCFPCAP GG+G AA +VL ALGLA   G KMW+M  AL   P    DFLPW
Sbjct:   72 KVEVPGLRVHAPWPGLHGACEGCGTPSVSGLGSGPTECEHCHRQIPGGEGGFRGKSKAPAAAAVGGEKAGKAGVVAVTSSRKVALSDERAKALAWAGGAMXXXXXXXXXXXXVTWRGIPFSLFSALSPWLAIYLPIPLGFLNGGWSVHCAKSGHIRHHSTGSCASRGGMCGTAWGCSGPSCALNLGLDLGLLITAVLAALPAGASARGCDYSCFWLLCFPCAPGGGEGMAAALVLTALGLAFATGFKMWIMAPALVSGPNSEQDFLPW 339

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig790.19186.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig790.19186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JAC9_9PHAE	3.520e-90	54.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..141
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 163..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 233..252
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 295..312
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 142..162
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 196..232
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 272..294
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 253..271
None	No IPR available	TMHMM	TMhelix		coord: 226..248
None	No IPR available	TMHMM	TMhelix		coord: 137..159
None	No IPR available	TMHMM	TMhelix		coord: 169..191
None	No IPR available	TMHMM	TMhelix		coord: 268..290

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig790	contig	F-serratus_M_contig790:145691..147544 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig790.19186.1	mRNA_F-serratus_M_contig790.19186.1	Fucus serratus male	mRNA	F-serratus_M_contig790 145345..147751 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig790.19186.1 ID=prot_F-serratus_M_contig790.19186.1|Name=mRNA_F-serratus_M_contig790.19186.1|organism=Fucus serratus male|type=polypeptide|length=313bp
MWLSKVRVYSAQSVAIHGDLPEGEAREAYRTTPQVTIGSRGTSGDALHRG
DSEQPPLPGREVGFPGLQVVAPSSGLHGACEVCGAPSIRQLELGRRLCEV
CVNAGELEKPSRVRMPWTVAVTSAREIALCDEHVRTLKWTGAVMLGTSLL
LLALPIAAWRGFDFSLVSTLSPWIGIYLPVPLGLLNGVWCLHCAWRGCVR
HEGTGSCVSRAGLCGTAWGCSGPSCALNLGLDLGLLITALLAALPAGSSA
AGCGYECYVILCFPCAPHGGQGAAACMVLAALGLALGVGTKMWVMTSALR
KDPFGRVDFLPW*