prot_F-serratus_M_contig786.19120.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig786.19120.1
Unique Nameprot_F-serratus_M_contig786.19120.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length302
Homology
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: J9IBQ1_9SPIT (IBR domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IBQ1_9SPIT)

HSP 1 Score: 102 bits (254), Expect = 5.420e-21
Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 0
Query:   13 CLICWDGAPATPRH-CSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGPCA---RDESYAEWRDSMSGRDDSEGVQECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWR 210
            CL+C++ +          C+   CR C+   L + V   +V    + C  + CQA FT QE+ S L  ++  K  +      V       +CPNP C     L     ++ +K+     C  C + FC +C  S H        +++ + +W D            +CP+C   +EK  GCQHM+CP+C+ EWCW+C L ++
Sbjct:   95 CLVCYNSSTVFEMFKIQNCEHKFCRMCINNHLIANVRIRKV--IDINCLQYTCQAKFTNQEIESYLSGDMKHKYQQYFNDYMVLMKGNVKYCPNPTCNF---LNEIGLLIGQKIT----CSGCSQDFCKKCNFSWHEDKTCEQVKEQEFGQWVDDKQ-------ANKCPKCKSRVEKNSGCQHMTCPVCKYEWCWVCGLSYK 280          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: R1EP48_EMIHU (RING-type domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EP48_EMIHU)

HSP 1 Score: 99.4 bits (246), Expect = 1.400e-19
Identity = 71/220 (32.27%), Postives = 98/220 (44.55%), Query Frame = 0
Query:    3 AMPKQLDAQQ----CLICWDGAPATPRHCSRCQRVTCRRCLQTFLNSRV--HQGRVDA--AFLAC--PNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPH-RGPCARDESYAEWRDSMSGRDD------SEGVQECPRCHHHIEKRGGCQHMSCPMCRAEWCWLC 205
            A+P +  A +    C++C++  P   R  + C    C  C +++  +R+  H   +DA  A + C  PN    AP +L  L   +       +  MR    +   P   +CPN AC + VC  R     PR     A C  C E +C  CG  PH    CA    +     S  G  D      SEG++ CP CH  IEK GGC HM C  CRA++CW C
Sbjct:  213 AVPGEASAAEEQGVCIVCFEDDPGVTRLHAGCGHQMCITCWRSYALARMEDHTSWLDASTAMIRCADPNCGVVAPDSL--LREAMKRGEYDALLAMRSNALIRSQPTLSYCPNAACVSLVCTTRPGDDQPRCFE--AACGACGERWCPSCGEEPHWPATCAECRVFK----SRHGDGDRPMQMPSEGIKPCPNCHAPIEKNGGCLHMRCWQCRADFCWAC 424          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A7S4VC84_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VC84_9DINO)

HSP 1 Score: 98.2 bits (243), Expect = 4.150e-19
Identity = 61/184 (33.15%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   35 CRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRG-PC--ARDESYAEWRDSMSGRDDSEGVQECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWRHHHSA 215
            C  C Q  L  +++   V      C    C   +  + L S+LD E   ++   R+   +++DPR  WCP P C   +      S+   KL     C +CK   C RC    H G PC    ++ + EW           GVQ CPRC   I K  GC HM+CP CR EWCW+CR  +   H A
Sbjct:  163 CNDCTQRHLLEKINSSNVGV--FVCMADGCNNQYKPKLLKSVLDKEQYDRLQWFRKRAKLSRDPRIRWCPTPNCSGYM----RGSLWRTKLK----CPKCKVLLCYRCNRPWHPGMPCMGTLEDQFHEWAKGH-------GVQPCPRCGVPIVKSEGCNHMTCPSCRYEWCWICRERYTPDHYA 329          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A7S4KPC8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KPC8_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 1.340e-18
Identity = 55/204 (26.96%), Postives = 89/204 (43.63%), Query Frame = 0
Query:   13 CLICWDGAPATPRHCSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFC-----------SRCGASPHRGPCARDESYAEWRDSMSGRDDSEGVQECPRCHHHIEKRGGCQHMSCPMCRAEWCWLC 205
            CLICW+  P        C  + C  CL+  L + +  G+V    L CP+ EC    T   + +++  ++  K      I ++ ++P   +C    C  AV L  +      K+    +C  CK+ +C           + C   P   P    + Y E +++         ++ CPRC+   EK+ GC HM+CP C+  WCWLC
Sbjct:  255 CLICWEDYPINSMKTLGCGHLYCSDCLEGHLETLICSGKVKK--LHCPDPECDIEVTPPIVKAVVRLDLYRKYVDFSAIANLRENPNARYCXXXKCSVAVVLDPAEMEKDPKV----VCPSCKKEYCFNCRNDYHGVGTECPEKPDNDPDKDFQRYCENKETA--------LKPCPRCNMSTEKKSGCNHMTCPSCQGNWCWLC 444          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A8C6UXX9_9GOBI (RBR-type E3 ubiquitin transferase n=2 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6UXX9_9GOBI)

HSP 1 Score: 94.4 bits (233), Expect = 1.390e-18
Identity = 69/236 (29.24%), Postives = 96/236 (40.68%), Query Frame = 0
Query:    6 KQLDAQQCLICWDGAPATPRHCSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGP-----CARDESYAEWRDSMSGRDDSEGVQE---------------------------CPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPW 209
            +Q D   C   W GA         C  V CR CL  F   ++  G V    + C +  C+A  T  ++ SL+  E+  +  ++    S++  P   +CP P+C +AV    SSS+        ALC  C  AFC  C  + H        CA D+  A W D  SG      + E                           CP C +HIEK GGC HM+C  C  ++CW+C   W
Sbjct:   93 QQFDCGVCFTSWLGAECV--QLIDCGHVFCRTCLAEFCKVQITNGSVRE--VTCLHAGCKAAPTPAQVRSLVGDELFGRYDRLLLQFSLDSMPDVMYCPRPSCASAVITDSSSSM--------ALCTVCSFAFCVHCKKTYHTDHVCPVLCAVDQE-ALWEDYSSGNRARRKLLEHRYGKGIMLGFLTSCLSEDWITINSKTCPHCFNHIEKNGGCDHMTCSQCNHQFCWICVCKW 315          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A7S4WC67_9STRA (RBR-type E3 ubiquitin transferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WC67_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.590e-18
Identity = 64/228 (28.07%), Postives = 98/228 (42.98%), Query Frame = 0
Query:   13 CLICWDGAPATPRH--CSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELH----SLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACG-AAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGPCARDESYAEWRDSMSGRDDSEGVQ-------ECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWRHHHSAVCFALRECRDR 226
            C IC++     P       C    CR C + F+N+ + +G  +     CP   C    T +E++    +LL      ++    + +  ++     WCP   C   AV  P  S           +C EC  +FC +CG  PH      D     W+D    +D+SE  +        CP+C   IEKRGGC HM+C  C+ ++CW+C   W  H S   F  ++ +DR
Sbjct:  253 CEICFEDGGFAPEDMIAMPCGHEYCRDCWRGFINNMLQEG-TECLNYTCPRVGCNEKVTEEEVNKAAPNLLPTYRERQLKAFADASMYSR-----WCPGKGCNRVAVGNPHHSVSFK------VVCGECDSSFCFKCGEEPHSPMTCYD--IVRWKDKC--KDESETAKWIMSHTKSCPKCKARIEKRGGCNHMTCRKCKYQFCWICMRHWGSHDSCNSFQSKKEQDR 464          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A8J6BVS8_9EUKA (IBR domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6BVS8_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 1.860e-18
Identity = 67/212 (31.60%), Postives = 94/212 (44.34%), Query Frame = 0
Query:   10 AQQCLICWDGAP-ATPRHCSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGPCARDESYAEWRDSMSGRDDSEGVQ--------ECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWRHH 212
            A++C +CW      TP     C   TC  C    +  +   G +  A   CP +EC AP       + L  ++ +    M   T V  DP+   CP P C   V   R + +        A C +C   FC++C    HR PC+     +EW + M   D  EG +        +CPRC   IEK  GC HM+C +CR E+CW+C+ PW  H
Sbjct:  196 AERCPVCWSPFDDETPALTLPCGHSTCADCFIQHIRVQAGDGTLGEA--VCPGYECVAPIPPVVAMATLPDDLKASYIAMITRTRVLVDPKAIICPGPDCALTVRKSRFTVV-------DAKC-DCGHLFCTKCLREAHR-PCSC-YRVSEW-EKMDQSD--EGTKRWLQIHSKKCPRCGTMIEKDRGCNHMTCKLCRHEFCWMCQRPWELH 392          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A7S4SDU5_9STRA (RBR-type E3 ubiquitin transferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDU5_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 7.130e-18
Identity = 63/227 (27.75%), Postives = 96/227 (42.29%), Query Frame = 0
Query:   13 CLICWDGAPATPRH--CSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELH----SLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACG-AAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGPCARDESYAEWRDSMSGRDDSEGVQ-------ECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWRHHHSAVCFALRECRD 225
            C IC++     P       C    CR C + F+N+ + +G  +     CP   C    T +E++    +LL      ++    + +  ++     WCP   C   AV  P  S           +C EC  +FC +CG  PH      D     W+D    +D+SE  +        CP+C   IEKRGGC HM+C  C+ E+CW+C   W  H +   F  ++  D
Sbjct:  253 CEICFEDGGFAPEDMIAMPCGHEYCRDCWRGFINNMLQEG-TECLNYTCPRVGCNEKVTEEEVNKAAPNLLPTYRERQLKAFADASMYSR-----WCPGKGCNRVAVGNPHHSVSFK------VVCGECDSSFCFKCGEEPHSPMTCYD--IVRWKDKC--KDESETAKWIMSHTKSCPKCKARIEKRGGCNHMTCRKCKYEFCWICMKNWNSHINCNTFTSKDGDD 463          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A6B2L1I9_9EUKA (RBR-type E3 ubiquitin transferase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L1I9_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 1.080e-17
Identity = 65/209 (31.10%), Postives = 90/209 (43.06%), Query Frame = 0
Query:   12 QCLICWDGAPATPRHCSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGPCARD-ESYAEWRDSMSGRDDSEGVQ-------ECPRCHHHIEKRGGCQHMSCPMCRAEWCWLCRLPWRHH 212
            +C IC +G      +   C    C+ C ++F   ++    V  AF  CP  +C+ P T       L  E   +  ++   + V     R WCP+P C   + L R SS  P  +     C  C   FC +C           D E  + W    +  D+SE VQ       +C RC  HIEK GGC HM+C  C  E+CWLCR  W+ H
Sbjct:  101 ECPICMEGCKLADTYSLCCGHTYCKNCWRSFAQEQMASNSVLEAF--CPYPKCKTPLTETTFQLFLSPEKFEQYKRLVLDSYVTTSNLRKWCPSPGCANYIQL-RISSNEPIPVE----CT-CSFRFCFQCNDYEIGDHAPADCEMVSNWIKKAA--DESENVQWITANTKKCTRCQSHIEKNGGCMHMTCRKCGHEFCWLCRKDWKGH 299          
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Match: A0A820RSA3_9BILA (RBR-type E3 ubiquitin transferase n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820RSA3_9BILA)

HSP 1 Score: 93.6 bits (231), Expect = 1.280e-17
Identity = 63/210 (30.00%), Postives = 103/210 (49.05%), Query Frame = 0
Query:   11 QQCLICW-DGAPATPRHCSRCQRVTCRRCLQTFLNSRVHQGRVDAAFLACPNFECQAPFTLQELHSLLD--AEVSSKIAK--MREITSVNQDPRRCWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGP----CARDESYAEWRD----SMSGRDDSEGVQECPRCHHHIEKR--GGCQHMSCPMCRAEWCWLC 205
            + CL+C+ D +     H + C    CR CL+++L   + +GR+    L CP+ +C       ++  +LD  +++ SK  +  +R +     D R  WCP P CG A+     +S    +  R      C  +FC  C A+ H        AR+++ A+ R     S++     + +++CPRC   I K   G C HM+CP+C AE+CWLC
Sbjct:  168 ETCLLCYHDYSSEQFEHLTLCSHSYCRTCLKSYLKLEITEGRIT---LNCPHNDCPERIHPSDISRILDNNSDLISKYEQFMVRRVLQSISDTR--WCPAPDCGFAIIASGYASCPEIQCLRPG----CNTSFCYHCKATWHPNKTCEDAAREKTSAKLRSGSFISLASAQQKDEIKQCPRCQASILKMDDGSCNHMTCPICEAEFCWLC 368          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig786.19120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J9IBQ1_9SPIT5.420e-2128.22IBR domain containing protein n=1 Tax=Oxytricha tr... [more]
R1EP48_EMIHU1.400e-1932.27RING-type domain-containing protein n=2 Tax=Emilia... [more]
A0A7S4VC84_9DINO4.150e-1933.15Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4KPC8_9EUKA1.340e-1826.96Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A8C6UXX9_9GOBI1.390e-1829.24RBR-type E3 ubiquitin transferase n=2 Tax=Neogobiu... [more]
A0A7S4WC67_9STRA1.590e-1828.07RBR-type E3 ubiquitin transferase n=2 Tax=Ditylum ... [more]
A0A8J6BVS8_9EUKA1.860e-1831.60IBR domain n=1 Tax=Carpediemonas membranifera TaxI... [more]
A0A7S4SDU5_9STRA7.130e-1827.75RBR-type E3 ubiquitin transferase n=2 Tax=Ditylum ... [more]
A0A6B2L1I9_9EUKA1.080e-1731.10RBR-type E3 ubiquitin transferase n=1 Tax=Arcella ... [more]
A0A820RSA3_9BILA1.280e-1730.00RBR-type E3 ubiquitin transferase n=1 Tax=Rotaria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 83..151
e-value: 2.5E-5
score: 33.7
coord: 158..217
e-value: 0.066
score: 14.9
IPR002867IBR domainPFAMPF01485IBRcoord: 171..214
e-value: 3.0E-7
score: 30.6
coord: 86..149
e-value: 1.1E-8
score: 35.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..98
e-value: 1.5E-8
score: 36.5
NoneNo IPR availableGENE3D1.20.120.1750coord: 150..230
e-value: 1.1E-12
score: 50.2
NoneNo IPR availablePANTHERPTHR11685:SF212E3 UBIQUITIN-PROTEIN LIGASE ARIH1coord: 11..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..252
NoneNo IPR availablePROSITEPS51873TRIADcoord: 9..223
score: 22.628
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..86
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 173..216
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 11..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig786contigF-serratus_M_contig786:109037..125295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig786.19120.1mRNA_F-serratus_M_contig786.19120.1Fucus serratus malemRNAF-serratus_M_contig786 109037..125619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig786.19120.1 ID=prot_F-serratus_M_contig786.19120.1|Name=mRNA_F-serratus_M_contig786.19120.1|organism=Fucus serratus male|type=polypeptide|length=302bp
MIAMPKQLDAQQCLICWDGAPATPRHCSRCQRVTCRRCLQTFLNSRVHQG
RVDAAFLACPNFECQAPFTLQELHSLLDAEVSSKIAKMREITSVNQDPRR
CWCPNPACGAAVCLPRSSSILPRKLARGALCQECKEAFCSRCGASPHRGP
CARDESYAEWRDSMSGRDDSEGVQECPRCHHHIEKRGGCQHMSCPMCRAE
WCWLCRLPWRHHHSAVCFALRECRDRGLTNSPIKCAATISVGVPVGICAG
AAAVTLATVLGAGWAVGAATYAVVVVPGKRARERLSRRWHERKAAVELSG
TD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR013083Znf_RING/FYVE/PHD
IPR031127E3_UB_ligase_RBR