prot_F-serratus_M_contig782.19070.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig782.19070.1
Unique Nameprot_F-serratus_M_contig782.19070.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length410
Homology
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BLAST of mRNA_F-serratus_M_contig782.19070.1 vs. uniprot
Match: D8LNW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW4_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 6.250e-49
Identity = 121/233 (51.93%), Postives = 144/233 (61.80%), Query Frame = 0 
Query:  113 AKDSTGAKGIYGLDREIVEREAAEAPFRRFRLIAYGFVALAAVVLGGVSVAGLAGVEEFSDLGRNLPNPLLDAAVLGLALYLWIEEVKTKRSALRLMEKRVEEESRVPNRAARRLNKRSGSEKRQRKRNIETEATTTPPASLSREGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMFEGVVKTLEAVNRQSYYQALALNKELEDKGVLPRLEREPGLPGDRAQVGV 345
            AK    A GIYG  REI+E+E A APFRR RLI Y   A  A+ L G+S+ G+AG++EF ++  NLPNPL+DA V+G A YLW+EEVKTKRS+L L++K  EE+S+VPNR+                                     XXXXXXXXXXXXXXXXXX               GMF GV +TLEAVN+QSYYQALALNKELEDKGVLP LER PG PG   +V +
Sbjct:   23 AKGGKDAAGIYGFAREIIEKEEASAPFRRLRLIGYAVPAFIAIFLAGISLGGMAGIDEFKEVSENLPNPLIDAGVVGAAFYLWVEEVKTKRSSLALLKKEYEEKSKVPNRSX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGATEQEVGPAPGRGMFAGVKETLEAVNKQSYYQALALNKELEDKGVLPPLERTPGPPGGEEEVAI 235
[Close]
BLAST of mRNA_F-serratus_M_contig782.19070.1 vs. uniprot
Match: A0A836CC29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC29_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.150e-15
Identity = 85/276 (30.80%), Postives = 118/276 (42.75%), Query Frame = 0 
Query:  113 AKDSTGAKGIYGLDREIVEREAAE-----------------------------------------APFRRFRLIAYGFVALAAVVLGGVSVAGLAGVEEFSDLGR--NLPNPLLDAAVLGLALYLWIEEVKTKRSALRLMEKRVEEESR---VP-NRAARR---LNKRSGSEKRQRKRN------IETEATTTPPASLSREGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMFEGVVKTLEAVNRQSYYQALALNKELEDKGVLPRLER 332
            AK+    KGIYG D E+V+RE AE                                         APFR  RL      A  AV+ G  SV GL GV+   +L    +LPNPLLDA VL +A Y+++E+VK KR  LR ++   + E +   +P NRA RR   + +  G +K +R +       +E E  T+ P  L    +                                   M +G  + L+ VN+QSY QALA+N  LE+KG+L  L+R
Sbjct:   57 AKNVESEKGIYGYDLEVVKRERAEHIDGRIFGGSTSPVSLSLVEVDVHDSSAVLLLLCLLRLRLQAPFRGTRLQIIAITAALAVICGATSVLGLVGVDSARELTERLSLPNPLLDAGVLAVAWYIYVEDVKVKRMRLREIDAVYQRELKGITLPGNRAGRRAAQVKEEKGKKKGKRSKKGGALAAVEAEPATSQPQVLHL-CIKCLTQTHAARHNGTQAAAVAPENDSSNVDESKPGSMLDGWKQALKDVNQQSYAQALAMNSMLEEKGILTPLQR 331
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig782.19070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNW4_ECTSI6.250e-4951.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CC29_9STRA2.150e-1530.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..409
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 182..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig782contigF-serratus_M_contig782:164167..196194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig782.19070.1mRNA_F-serratus_M_contig782.19070.1Fucus serratus malemRNAF-serratus_M_contig782 164092..196746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig782.19070.1 ID=prot_F-serratus_M_contig782.19070.1|Name=mRNA_F-serratus_M_contig782.19070.1|organism=Fucus serratus male|type=polypeptide|length=410bp
MDRLITPAFTAALFLYQTSRVGAYLPGLHLRLRQNNEYRHHNVQLLQQRP
ILPQPRSKKLPRTSLLVQLPTRRFPTCSGKLTIELVGSTLMATPGGGQQD
EGDGSQGAHERVAKDSTGAKGIYGLDREIVEREAAEAPFRRFRLIAYGFV
ALAAVVLGGVSVAGLAGVEEFSDLGRNLPNPLLDAAVLGLALYLWIEEVK
TKRSALRLMEKRVEEESRVPNRAARRLNKRSGSEKRQRKRNIETEATTTP
PASLSREGLSSAGGGESSGGAISEPQTSSATSNSDDDDRGAGGGMFEGVV
KTLEAVNRQSYYQALALNKELEDKGVLPRLEREPGLPGDRAQVGVDPESR
RDPPDLVVDMEESLEGRAGVLDIEEDPKGGRKAAPGRGETIRREKNKSAA
KRKGRHRKR*
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