mRNA_F-serratus_M_contig782.19067.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 167 bits (424), Expect = 5.230e-41 Identity = 97/226 (42.92%), Postives = 143/226 (63.27%), Query Frame = 1
Query: 1 VLIRVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNSSFLLKSARTLFLVIWTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAASPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEKKV 678
VLIRVS AR++ YR V A D LPAPFNL Q VV+ PC +VD + K T A+R +GRI+FWL++GP AILGG +WL+S PKA+ +WG ++ +S L RT+ ++W +GVP LV++W++QA RVL G+TF LE A TVD +L++ TG +GM LR ++++PV S CY + +D+ T+ ++ L ++ A+E + LEK++
Sbjct: 792 VLIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWGKRSLSIASRL---GRTMLCLLWITLGVPLCLVVSWVTQATRVLFGRTFGLEGARSSGPIIYTVDDMLREVTG-VGMAALRMHLKNPV-ASEKCYVSARVEDRLATVD-LQALRFHVEDMAKEHIEAAHRRLEKQL 1011
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.360e-40 Identity = 95/222 (42.79%), Postives = 135/222 (60.81%), Query Frame = 1
Query: 1 VLIRVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNSSFLLKSARTLFLVIWTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAASPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYS-----NLGWQDKATTLGHVKTLGQWLDTSAQERFDK 651
VLIRVS AR++ YR V A D LPAPFNL Q VV+ PC +VD + K+ T A+R +GRI+FWL++GP AILGG +WL+S PKA+ + ++ S L + RT+ ++W +GVP LV++W++QA RVL G+TF LE A P TVD +LK+ TG +GM LR ++++PV + C S L D HV+ + + +A R +K
Sbjct: 883 VLIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGPGAILGGIFVWLVSTPKALFAIC---RKRSLSILSRVGRTMLCLLWITLGVPLCLVVSWVTQATRVLFGRTFGLEGARPSGPIIHTVDDMLKEVTG-VGMATLRMHLKNPVASEKCCVSARAADRLATADLQALRDHVEDMTKEHIEAAHRRLEK 1100
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.810e-19 Identity = 71/246 (28.86%), Postives = 126/246 (51.22%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFP--------CG-IVDFVLKTKTRVTAKR--------FIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNS----SFLLKSARTLFLV-IWTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAA-SPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEKKV 678
+ S AR+ Y+ V DILPAPFNL+Q VV +P CG T+ + R IG ++FW+++GP+A++GG++LW++S P + + +W + S + R F++ +W ++G P +L + WL + R+L + + A + F T++ +L + GG+G + LR ++ DP+++ +DK TT+ HVK L L+ + Q+ L+ L K++
Sbjct: 793 KASIARMMDHYQLVVTNDILPAPFNLLQLVV-WPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTPLS-VYLWRKHHREGDRKRLSLISLGCRYFFIIPLWCILGAPVYLFVLWLGASRRLLCRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDE---RDKRTTVEHVKLLRNRLENTIQDELRGLENALHKRM 1033
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 4.020e-17 Identity = 71/257 (27.63%), Postives = 129/257 (50.19%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVV------VFPC-----GIVDFVLKTKTR-----VTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVW------------GAQTSQNSSFLLKSARTLFLVI--WTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAASPPRE----FPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEKKV 678
+VS AR+ Y+ V D+LP PFNL+Q +V + C G+ +T+ R + IG ++FW+++GP+A++GGS+LW+ S+ AM W G S+ S L ++I W + G P +L+L WL+ + RVL+ + + S + ST++ +L + GG+G + LR ++ DP+++ +D+ TT+ H+K L L+ +++E+ L+ L +++
Sbjct: 985 KVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYF-WRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLWLNASRRVLSRCPCNDDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDE---KDRRTTVEHIKLLRNRLENTSKEQLKGLEEALHQRL 1237
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.130e-16 Identity = 72/257 (28.02%), Postives = 129/257 (50.19%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVV------VFPC-----GIVDFVLKTKTR-----VTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVW------------GAQTSQNSSFL--LKSARTLFLVIWTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAASPPRE----FPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEKKV 678
+VS AR+ Y+ V D+LP PFNL+Q VV + C G+ +T+ R + I ++FW+++GP+A+ GGS+LW+ S+ AM W G S+ S L L + + W + G P +L+L WL+ + RVL+ + +A+S + ST++ +L + GG+G + LR ++ DP+++ +D+ TT+ H+K L L+ +++E+ L+ L +++
Sbjct: 259 KVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMESVLPAMYF-WRKHHRLQNKRENGGGDSKKSMHLWSLFLRYNVIIPCWCVFGAPVYLLLLWLNASGRVLSRCPCNDDASSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDE---KDRRTTVEHIKLLRNRLENTSKEQLKGLEEALHQRM 511
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 4.660e-13 Identity = 65/238 (27.31%), Postives = 116/238 (48.74%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLV----VWGAQTSQNSSFLLKSARTLFLVI--WTLIGVPTFLVLAWLSQAPRVLTGKTFSL-----EAASPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEKKVAATT 690
+VS AR+ YR V M +LP PFNLVQ ++ P + D + A+ +GR+ FWL +GP+A G+VLW+LS A V + ++ + + S +L++ W ++G P +L+ WL+ + L + + +A P +V+ LL+ +GG+ +L+ Y+ DP+ + + K TT+ ++K L L+ + D +E+ A++T
Sbjct: 1034 KVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDE---RRKQTTVENIKQLRNRLEKTILTHLDAKLDSIEQDRASST 1268
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.540e-12 Identity = 70/294 (23.81%), Postives = 121/294 (41.16%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVT--------------------------------------AKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNSSFLLKSARTLFLVIWTLIGVPTFLVLAWL-----------------------------------SQAPRVLTGKTFSLEAASPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLDTSAQERFDKLKAGLEK 672
+V+ ARL Y V +D LP PFNL Q++ P ++D +T R + A+ F GR+ FW ++GP+A+L G VLW++S+ KA +VVW QTS + S + AR L ++ +G P + ++ W+ + A G ++ A + V +L++A G + L+ ++ DP+++ + +ATT+ H+K L L+ + +E + L+A L K
Sbjct: 1352 KVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVVVW--QTSGDKSLGGRIARMLLVIFVCAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDE---ETRATTVEHIKLLRNRLEATTKEHMNGLQAYLLK 1640
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 6.160e-9 Identity = 69/244 (28.28%), Postives = 105/244 (43.03%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVTAKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNSSFLLKSARTLFLVIWTLIGVPTFLVLAWLSQAPRVLTGKTFSLEAASPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTL------------------GQWLDTSAQERFDKLKAGLEKKVAAT 687
+VS AR+ R D LPAPFN+ Q + +V + K AK+ IG+ + W ++G MA +GGS+LW+LS+ A L VW ++ L + +++ T G V + + +F S DG+LK A G+GM LR ++ DP+NN + ++TT+ H+K L G+ E FD+ LE KVA T
Sbjct: 399 KVSKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYALVMPSFRRKRYDEAKQAIGQAVSWFVLGLMAFVGGSILWILSVVYA-LFVW----HEHYYVGLDTHTAHVIILQTEPGSNDTAVYPYPCVVRLGCSVVSFPARGQDASTRASSGGDGMLKSADQGVGMAKLREFLADPMNNRDVRKAGT---TRSTTVEHLKLLRDRLVKDIVGRLCRLLRKGKAWPKHLIEAFDQRLQQLEAKVAET 634
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 62.8 bits (151), Expect = 1.220e-6 Identity = 74/300 (24.67%), Postives = 114/300 (38.00%), Query Frame = 1
Query: 10 RVSAARLFMFYRRVTAMDILPAPFNLVQFVVVFPCGIVD------FVLKTKTRVT----------------------------AKRFIGRIIFWLIMGPMAILGGSVLWLLSLPKAMLVVWGAQTSQNSS------FLLKSA-----------------------RTL--------FLVIWT-------------LIGVPTFLVLAWLSQAPRVLTGKTFSLEAA-----------SPPREFPSTVDGLLKDATGGMGMENLRAYIRDPVNNSSACYSNLGWQDKATTLGHVKTLGQWLD 624
+VS AR+ YR V D+LPAPFNLVQ ++ G++ F+L+ K + A+R G++++WL++GP+A+ GG++LW LS W + S FLL+S R L FL+ W ++G P L L WL + L A SP R T++ +LK G+G E L ++ DP+N+ ++K TT+ H+K L L+
Sbjct: 972 KVSKARIIAHYRTVVDNDVLPAPFNLVQLLL--SLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWLVLPGTEFFSWCWKLAACRSTQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDE---KEKKTTVEHIKLLRDRLE 1266 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig782.19067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig782.19067.1 >prot_F-serratus_M_contig782.19067.1 ID=prot_F-serratus_M_contig782.19067.1|Name=mRNA_F-serratus_M_contig782.19067.1|organism=Fucus serratus male|type=polypeptide|length=246bp MFYRRVTAMDILPAPFNLVQFVVVFPCGIVDFVLKTKTRVTAKRFIGRIIback to top mRNA from alignment at F-serratus_M_contig782:87988..89451+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig782.19067.1 ID=mRNA_F-serratus_M_contig782.19067.1|Name=mRNA_F-serratus_M_contig782.19067.1|organism=Fucus serratus male|type=mRNA|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig782:87988..89451+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig782:87988..89451+ >mRNA_F-serratus_M_contig782.19067.1 ID=mRNA_F-serratus_M_contig782.19067.1|Name=mRNA_F-serratus_M_contig782.19067.1|organism=Fucus serratus male|type=CDS|length=1476bp|location=Sequence derived from alignment at F-serratus_M_contig782:87988..89451+ (Fucus serratus male)back to top |