mRNA_F-serratus_M_contig7801.19061.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: A0A8K0NUE5_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0NUE5_LADFU) HSP 1 Score: 53.5 bits (127), Expect = 3.490e-6 Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 64 IKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMN-DVKEAVSKLGNGKAVG-------FRRCL 300
IK+ASG+++R+ + RWKE+F +LLN ++P L DG E LA + +VK A+ K+ NGKAVG R+CL
Sbjct: 118 IKDASGVIIREDGDVRKRWKEYFHKLLNEENPRLRNEEGDGNE-------LAVQDMSRVEVKAALKKVKNGKAVGADQIPVEIRKCL 197
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: A0A3B3HUN9_ORYLA (Reverse transcriptase domain-containing protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3HUN9_ORYLA) HSP 1 Score: 52.0 bits (123), Expect = 1.670e-5 Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 28 ELEGKRGCKSTYIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
++ G R + +++ SG LL PSI RW E F ELLN + T+DAS++D IEQLP L T ++ A+ GK+ G
Sbjct: 189 KIYGPRSKTTHPVRSKSGALLTSTPSIKGRWVEHFSELLNQPT-TVDASLIDDIEQLPTDVSLDLPITEEELDIALKNTKLGKSPG 273
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5F87EB (uncharacterized protein LOC124805420 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5F87EB) HSP 1 Score: 51.6 bits (122), Expect = 1.730e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 147 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISVSQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 218
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5E8EE8 (uncharacterized protein LOC124719790 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5E8EE8) HSP 1 Score: 51.6 bits (122), Expect = 1.790e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 147 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISVSQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 218
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5F24CA (uncharacterized protein LOC124777988 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5F24CA) HSP 1 Score: 51.6 bits (122), Expect = 1.900e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 147 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISVSQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 218
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5FE6C3 (uncharacterized protein LOC124795698 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5FE6C3) HSP 1 Score: 51.6 bits (122), Expect = 2.060e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 196 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISVSQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 267
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5F0EE2 (uncharacterized protein LOC124719631 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5F0EE2) HSP 1 Score: 51.6 bits (122), Expect = 2.300e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 831 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISVSQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 902
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: UPI001F5E4078 (uncharacterized protein LOC124718771 n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5E4078) HSP 1 Score: 51.2 bits (121), Expect = 3.030e-5 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 61 YIKNASGMLLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVG 285
+I + G LL ++ I RWKE+F ELLNA PT+ S D E L P EP++ ++KE++ KL KA G
Sbjct: 472 FITDPDGSLLTERSDIANRWKEYFNELLNA--PTISISQEDDNEYLTAD-PSDEEPSLAEIKESIKKLKRHKAPG 543
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: A0A6P8H386_ACTTE (uncharacterized protein LOC116287377 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H386_ACTTE) HSP 1 Score: 48.5 bits (114), Expect = 5.520e-5 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 52 KSTYIKNASGMLLRDKPSILLRWKEWFQELLNAKSPT--LDASILDGIEQLPEHAPLAA-EPTMNDVKEAVSKLGNGKAVGF 288
+ST ++N +G L K + W E F+E+ N + P + + +G E +A EPT+ +VKEAV KL NGKA+G
Sbjct: 18 QSTAVENKNGNFLSMKSEVQATWMEHFKEVPNREQPANPITSEEENGFEFSAVMEEIAVNEPTIGEVKEAVKKLKNGKALGI 99
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Match: A0A8M1KV33_CLUHA (zinc finger protein 883-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KV33_CLUHA) HSP 1 Score: 50.1 bits (118), Expect = 7.560e-5 Identity = 36/95 (37.89%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 7 YQDIKSLELEGKRGCKSTYIKNASGM-LLRDKPSILLRWKEWFQELLNAKSPTLDASILDGIEQLPEHAPLAAEPTMNDVKEAVSKLGNGKAVGF 288
Y +KS++ G T +K A G+ +L+D+ S+L RW E F LLN S D +ILD + +LP L PT +V AV L N K+ G
Sbjct: 26 YNAVKSID--GPTNHCITPLKTADGLRVLKDQSSVLERWAEHFNTLLNRDSEA-DHTILDQLPELPPIDILNQPPTFLEVLSAVRSLKNNKSPGM 117 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7801.19061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7801.19061.1 >prot_F-serratus_M_contig7801.19061.1 ID=prot_F-serratus_M_contig7801.19061.1|Name=mRNA_F-serratus_M_contig7801.19061.1|organism=Fucus serratus male|type=polypeptide|length=102bp ELYQDIKSLELEGKRGCKSTYIKNASGMLLRDKPSILLRWKEWFQELLNAback to top mRNA from alignment at F-serratus_M_contig7801:2427..2732- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7801.19061.1 ID=mRNA_F-serratus_M_contig7801.19061.1|Name=mRNA_F-serratus_M_contig7801.19061.1|organism=Fucus serratus male|type=mRNA|length=306bp|location=Sequence derived from alignment at F-serratus_M_contig7801:2427..2732- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7801:2427..2732- >mRNA_F-serratus_M_contig7801.19061.1 ID=mRNA_F-serratus_M_contig7801.19061.1|Name=mRNA_F-serratus_M_contig7801.19061.1|organism=Fucus serratus male|type=CDS|length=612bp|location=Sequence derived from alignment at F-serratus_M_contig7801:2427..2732- (Fucus serratus male)back to top |