prot_F-serratus_M_contig775.19006.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig775.19006.1
Unique Nameprot_F-serratus_M_contig775.19006.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length138
Homology
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BLAST of mRNA_F-serratus_M_contig775.19006.1 vs. uniprot
Match: A0A6H5KN98_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN98_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.940e-31
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 0 
Query:    7 RAHERQLRKEIETLSLYRAIVDNGPDLFSVHTEVVDAPFRFASEDFHRRLHIPPAALIGQPLASIVDSRDRDSLKAGLLQVLDDNKENAG-RVAGGGKLLELRVSIGGLSYRATMSMSIGSSGIIVVTRLY 136
            R  E  L++E+E LSLY+A+V+ GPDLFS H    DAPF FA E++  +L + P   +G+PLASIVD  D   L   L +VL  NK N G    G GKL++LRVS G +S  A+MSM IGS G++VVTRLY
Sbjct:   36 RRAEALLKEEVEILSLYKALVEEGPDLFSCHRVEPDAPFSFACENYFHQLQLAPEDAVGKPLASIVDPEDAPILAEALNEVLA-NKTNIGDSEPGSGKLVKLRVSCGSISCSASMSMVIGSQGLVVVTRLY 165
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BLAST of mRNA_F-serratus_M_contig775.19006.1 vs. uniprot
Match: A0A6H5KRF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF4_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-23
Identity = 53/135 (39.26%), Postives = 84/135 (62.22%), Query Frame = 0 
Query:    7 RAHERQLRKEIETLSLYRAIVDNGPDLFSVHTEVVDAPFRFASEDFHRRLHIPPAALIGQPLASIVDSRDRDSLKAGLLQVLDDNKENAGRVAGGGK----LLELRVSIGGLSYRATMSMSIGSSGIIVVTRLYE 137
            R  ER L + +E L L ++IV++GPDLFS+H   +DAPF +  ++F  RL +PP A++G+ L SIVD R+  SL+  + QVL++ +               ++ +R++ G +   A+MS++ GS G+IVVTRLY 
Sbjct:   41 RERERALSEHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCDNFTMRLQMPPEAMVGRSLLSIVDEREALSLRNAIFQVLNEAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLIVVTRLYS 175
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BLAST of mRNA_F-serratus_M_contig775.19006.1 vs. uniprot
Match: D8LCA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA0_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.800e-13
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:   15 KEIETLSLYRAIVDNGPDLFSVHTEVVDAPFRFASEDFHRRLHIPPAALIGQPLASIVDSRDRDSLKAGLLQVLDDNKENAGR 97
            +E + L +YR IV+NGPDLFS+H   +DAPF F S+  + +  +P   L+G+PL ++VD  D   L   LL VL  N  + G+
Sbjct:    8 QEEDVLEVYRDIVENGPDLFSLHGTTLDAPFSFVSKSLNLKFQLPSEYLLGKPLKTVVDPDDWGVLTTALLAVLGPNPTSGGK 90
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig775.19006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KN98_9PHAE2.940e-3151.91PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KRF4_9PHAE1.340e-2339.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCA0_ECTSI1.800e-1342.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 21..89
e-value: 0.0022
score: 27.3
NoneNo IPR availableGENE3D3.30.450.20coord: 4..131
e-value: 1.1E-5
score: 27.4
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 12..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig775contigF-serratus_M_contig775:141634..194007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig775.19006.1mRNA_F-serratus_M_contig775.19006.1Fucus serratus malemRNAF-serratus_M_contig775 138682..194493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig775.19006.1 ID=prot_F-serratus_M_contig775.19006.1|Name=mRNA_F-serratus_M_contig775.19006.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MGDQMLRAHERQLRKEIETLSLYRAIVDNGPDLFSVHTEVVDAPFRFASE
DFHRRLHIPPAALIGQPLASIVDSRDRDSLKAGLLQVLDDNKENAGRVAG
GGKLLELRVSIGGLSYRATMSMSIGSSGIIVVTRLYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf