mRNA_F-serratus_M_contig769.18937.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig769.18937.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE) HSP 1 Score: 376 bits (965), Expect = 4.940e-107 Identity = 252/414 (60.87%), Postives = 297/414 (71.74%), Query Frame = 1
Query: 1786 GIVEPGAIAAETEPAADGSTME---GEAVA--ALSSNRPRIESCPQANG-RGLTGAGRRRNRRQAAQPELGLA--YGHEDDQAKFSQAEVNAKIRERLAEEQATFEKTVASMKAAHEAELQAAAARLRQSCSDGDRAMMAARDTEALEHEIAMLSERFGEAAAEAKGNGKALLEKEALLDAVTAQLMGLKTELATEREAHSAEKLSLRDEADHERRVRSAAEGKLAQLEEAYNRLEDAEREKRMAGIGKMKEDMKVLAQAQFSMANKKFNAIKNRLETVEAEARQLREAAMMHAETLGAAEGKAQVLRDEVESLKKELVERSSEASQREYVXXXXXXXXXXXXXXXXXXXEAMTYERDSANKGRAVSQDALARMAIRNSEMKDSVTDLECKVKELEDFCTQALDELDRERAKNA 3003
G PG A T+ A T E GEA A + R E+ QA G RGL G GRRRNRRQ Q ELG+A YGHED +AKFSQAEV+AKI+ERLAEEQA FEKTV+++KA H+A+LQAAA +L+QS SDG+RA +AARD EALE EIAMLSER+GEAAAEAK +GK LLEKEALLDAVTAQLMGLK++LAT R H+AEK + + AD ERR RS AE KL QLE AYN+LED+EREKR AGI KMK DMK LAQ QF+ ANK+ A++ RLE EA+ R L EAA L A K+ LR +VE+L+KE E ++ AS+RE+V EAM ERD+AN GR VSQDALARMAIRN+++K+SV DLE KVKELE FCT+ALDELDRE+AKNA
Sbjct: 596 GAAAPGDEATATQAATATHTPERSGGEADAHDGKEKSAARDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQAAFEKTVSALKATHDADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKMLLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKRRMTETADSERRARSLAESKLQQLEAAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQIRLLEEAAKDLNAKLETAGQKSTELRGQVEALQKEKAEAAANASRREHVLQQEATALRNEAESRLDEMEAMARERDAANNGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKAKNA 1009
BLAST of mRNA_F-serratus_M_contig769.18937.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI) HSP 1 Score: 372 bits (955), Expect = 1.790e-105 Identity = 282/585 (48.21%), Postives = 354/585 (60.51%), Query Frame = 1
Query: 1258 MAKDVFFECSSQVEERAEGSSDSEQSGKKMPQPSDESWQKRQLSPTSEDSSVGLPHVEEHHEACIPPASPGAGAASSPSPSVSEERGNELSPTLVPRRLSAGGQTPDPVAAAAIEAAVAASVXGDXXXXXXXXXTAVRACVDSSPLRSGGSSPLRCLSPHPDSSSWLRSTGKLEEEGIVEPGAIAAETEPAADGSTMEGEAVAALSSNRPRIESCPQANG-RGLTGAGRRRNRRQAAQPELGLA--YGHEDDQAKFSQAEVNAKIRERLAEEQATFEKTVASMKAAHEAELQAAAARLRQSCSDGDRAMMAARDTEALEHEIAMLSERFGEAAAEAKGNGKALLEKEALLDAVTAQLMGLKTELATEREAHSAEKLSLRDEADHERRVRSAAEGKLAQLEEAYNRLEDAEREKRMAGIGKMKEDMKVLAQAQFSMANKKFNAIKNRLETVEAEARQLREAAMMHAETLGAAEGKAQVLRDEVESLKKELVERSSEASQREYVXXXXXXXXXXXXXXXXXXXEAMTYERDSANKGRAVSQDALARMAIRNSEMKDSVTDLECKVKELEDFCTQALDELDRERAKNA 3003
++KD +FECSS+VE S+S+ SG K PS Q + TSE + + + A+P +L+P +P AA+ AA AA V GD + DS+P + L ++P ++ + + +E + A T P +GS E A + E+ QA G RGL G GRRRNRRQ Q ELG+A YGHED +AKFSQAEV+AKI+ERLAEEQ+ FEKTV+ +K+ HEA+LQAAA +L+QS SDG+RA +AARD EALE EIAMLSER+GEAAAEAK +GK LLEKEALLDAVTAQLMGLK++LAT R H+AEK + + AD ERR RS AE +L QLE AYN+LED+EREKR AGI KMK DMK LAQ QF+ ANK+ A++ RLE EA+ R L EAA L A K+ L +VE+L+ E VE ++ AS+RE+V EAM ERD+AN GR VSQDALARMAIRN+++K+SV DLE KVKELE FCT+ALDELDRE+ KNA
Sbjct: 458 LSKDRYFECSSEVEHVLASDSESD-SGDKDVDPSSSKEQALESEQTSEQPAPPVNETNSDRISSSLAAAPXXXXXXXXXXXXXXXXXXXXXMSLLP---VVEADSPAAALEAAVAAAKAADVNGDVEPGG------ITVAADSAPSQKV----LVRVAPGEETDVDVGAAAPADEATATQ---AATATYPP-EGSGGEANAHDGKEKGAAQDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQSAFEKTVSGLKSTHEADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKILLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKQRMTETADSERRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAASASRREHVLQQEATALRNDAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKVKNA 1024 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig769.18937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig769.18937.1 >prot_F-serratus_M_contig769.18937.1 ID=prot_F-serratus_M_contig769.18937.1|Name=mRNA_F-serratus_M_contig769.18937.1|organism=Fucus serratus male|type=polypeptide|length=974bp MPVFAFSSRPEQGSGQTAGDKENASHQKSVPRCYKQNNDVGAAGTTTPRRback to top mRNA from alignment at F-serratus_M_contig769:129578..145523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig769.18937.1 ID=mRNA_F-serratus_M_contig769.18937.1|Name=mRNA_F-serratus_M_contig769.18937.1|organism=Fucus serratus male|type=mRNA|length=15946bp|location=Sequence derived from alignment at F-serratus_M_contig769:129578..145523- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig769:129578..145523- >mRNA_F-serratus_M_contig769.18937.1 ID=mRNA_F-serratus_M_contig769.18937.1|Name=mRNA_F-serratus_M_contig769.18937.1|organism=Fucus serratus male|type=CDS|length=5844bp|location=Sequence derived from alignment at F-serratus_M_contig769:129578..145523- (Fucus serratus male)back to top |