mRNA_F-serratus_M_contig763.18891.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE) HSP 1 Score: 293 bits (749), Expect = 2.970e-94 Identity = 185/333 (55.56%), Postives = 214/333 (64.26%), Query Frame = 1
Query: 1 CRLHGCSKEVFFDEETETVHDFCCRRHANLAINRGQWPLWDSEGDSQCEXXXXXXXXXXXXXXXXXXXXXXXXHV-------AQGRALE----CVYXXXXXXXXXXXXXXASLGYCGSRCASGVGAGHLVGQTEXXXXXXXXXXXXXXXXXXXXXXXSDDHRSRAEQRQLGPNTEPHVDRTFRGGPGQNDFQLKVLTNRHASYPSLKEQFFTKWMKPWEGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKVRI 966
C+LHGC+ E+FFDE+T TVHDFCCRRHAN+A RGQWP +G S XXXXXXXXXXXXXXXXXXXXXXXX AQ A E C L +CGSRCA GA H VGQ + D HR +AE+R L N E HVDRTFRGGP +DF+L VLT H ++ SLKEQF K+ KP +GL++ERIFKVQVP V +HK + + +NTRRRFHGTSCS AC FFM GG PCG C+VC+ICT GF+LRG GRTAQ TN LR+GEGLYFSSVSGKANDYA+ S+KVR+
Sbjct: 23 CQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDIRSGDQLAFCGSRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPS-DDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGG-PCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEKVRM 353
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI) HSP 1 Score: 269 bits (688), Expect = 2.120e-84 Identity = 179/335 (53.43%), Postives = 207/335 (61.79%), Query Frame = 1
Query: 1 CRLHGCSKEVFFDEETETVHDFCCRRHANLAINRGQWPLWDSEGDS-------QCEXXXXXXXXXXXXXXXXXXXXXXXXHVAQGRALE----CVYXXXXXXXXXXXXXXASLGYCGSRCASGVGAGHLVGQTEXXXXXXXXXXXXXXXXXXXXXXXSDDHRSRAEQRQLGPNTEPHVDRTFRGGPGQNDFQLKVLTNRHASYPSLKEQFFTKWMKPWEGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKVRIRF 972
C+LHGC+ EVFFDE T TV +A RGQWP +G S XXXXXXXXXXXXXXXXXXXXXXXX AQ A E C L +CGSRCA GA HLVGQ + D HR +AE+R L N E HVDRTFRGGP +DF+L VLT H +Y SLKEQF K+ KP +GL++ERIFKVQVP V ++HK + E +NTRRRFHGTSCS AC FFM GG PCG C+VC+ICT GF+LRG +GRTAQ TN +LR+GEGLYFSSVSGKANDYA+ S+KV + F
Sbjct: 53 CQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDHRSGDQLAFCGSRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPS-DDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGG-PCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEKVYLPF 385
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 250 bits (638), Expect = 4.130e-76 Identity = 146/338 (43.20%), Postives = 177/338 (52.37%), Query Frame = 1
Query: 1 CRLHGCSKEVFFDEETETVHDFCCRRHANLAI------------NRGQWPLWDSEGDSQCEXXXXXXXXXXXXXXXXXXXXXXXXHVAQGRAL---ECVYXXXXXXXXXXXXXXASLGYCGSRCASGVGAGHLVGQTEXXXXXXXXXXXXXXXXXXXXXXXSDDHRSRAEQRQLGPNTEPHVDRTFRGGP-GQNDFQLKVLTNRHASYPSLKEQFFTKWMKPW--EGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
C+L GCS+ V+ DE + VH+FC R HAN A+ G+ +G +C H G A+ EC+ L YCGSRCA VG +LVG +DHR RA QR LGPN EP VDRTFRGG +DFQL VLTNRH Y S K+QF KW KP G+++ RIFKVQVP + R + QV N +RRFHGTSCS+ C+FF+ GG PCGE +C VCNICT GF+LR +G TA+ TNF LR+G+GLYFSSVSGKANDYA S+K
Sbjct: 66 CKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGG-PCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKT 402
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.520e-57 Identity = 123/328 (37.50%), Postives = 156/328 (47.56%), Query Frame = 1
Query: 1 CRLHGCSKEVFFDEETETVHDFCCRRHANLAINRGQWPLWDSEGD-----SQCEXXXXXXXXXXXXXXXXXXXXXXXXHVAQGRALECVYXXXXXXXXXXXXXXASLGYCGSRCASGVGAGHLVGQTEXXXXXXXXXXXXXXXXXXXXXXXSDDHRSRAEQRQLGPNTEPHVDRTF-RGGPGQNDFQLKVLTNRHASYPSLKEQFFTKWMKPWE--GLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
C+L GCS V+FD + V GQW S G+ S C+ H AQ EC+ YC SRCA G +DHR R EQ+ LG N + +V+R F RG G DF+L VL+ H YPSL +QF KW+KP G+++E+I V+VP V + K Y + V N RRRFHGTSCS+ C+FF+ G PC ++ C VC+ICT GF L+G +G TA+ TNF LR+GEGLYFSSVSGKANDYA S+K
Sbjct: 58 CKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQ--YCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGN-PCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKT 382
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.970e-45 Identity = 82/159 (51.57%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 487 TEPHVDRTFRGGP-GQNDFQLKVLTNRHASYPSLKEQFFTKWMKPWEGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
T+ HV++TFRGG G DF L L+ H YPSL QF +KW+KP + RI +V+VP +Y++ Y + N RRRFHGTSCS+ C+FF+ G PC ++C+VCNICT GF LR + TA+ N+ R+GEGLYFSSVSGK+NDYA S+KV
Sbjct: 4 TQSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVL-RILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGN-PCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKV 160
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 164 bits (415), Expect = 7.400e-45 Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 496 HVDRTFRGGP-GQNDFQLKVLTNRHASYPSLKEQFFTKWMKPWEGLT-IERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
HV + FRGG G DF L VL+ H Y SL QF +KW+K G+ + RI +V+VP +Y ++ Y + N RRRFHGTSCS+ C+FF+ G PC R C+VCNICT GF L+G +G TA+ T+ LR+GEGLYFSSVSGK+NDYA S+KV
Sbjct: 69 HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKG--GVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGN-PCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKV 222
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 157 bits (396), Expect = 1.060e-40 Identity = 132/328 (40.24%), Postives = 169/328 (51.52%), Query Frame = 1
Query: 1 CRLHGCSKEVFFDEETETVHDFCCRRHANLAINRGQWPLWDSEGDSQCEXXXXXXXXXXXXXXXXXXXXXXXXHVAQGRALECVYXXXXXXXXXXXXXXASLGYCGSRCASGVGAGHLV----GQTEXXXXXXXXXXXXXXXXXXXXXXXSDDHRSRAEQRQLGP--NTEPHVDRTFRGGPGQNDFQLKVLTNRHASYPSLKEQFFTKWMKPW--EGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
C+L GCSK V+FD +T V+ ++RG W XXXXXXXXXXXXXXXXXXXXXX H G+A C S YC + C S LV + S+ HR ++ G ++EP+V + G + F L L H PSL+ QF TKW+KP EG+++ RIF+V+VP V ++H +Y+ V N RRRFHGTSCS C+F + PCG RSCS+CNI GFKL +GRTA NF+LR+G+G+YFSSVSGKANDYA + K
Sbjct: 57 CQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTD--SRQYCSAYCFS---KERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR--FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRS-PCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKT 376
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: A0A6H5JYU8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU8_9PHAE) HSP 1 Score: 144 bits (364), Expect = 9.700e-36 Identity = 74/142 (52.11%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 544 LKVLTNRHASYPSLKEQFFTKWMK--PWEGLTIERIFKVQVPTAVYERHKEYSEQVH-NTRRRFHGTSCSSACSFFMKFSGGGPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQKV 960
L +L Y +L +QF TKW+K P G++IERIF +Q+ AV +H Y V N RR+FHGTSC+ C+F + PCG SCSVC+IC +GFK++ +G TA+ T FSLR+GEG+YFSSVSGKANDYA SQK
Sbjct: 315 LHMLDQHDWEYEALCDQFRTKWLKFQPPRGVSIERIFSIQIDPAVRNKHDRYKLTVSINPRRQFHGTSCNEKCNFIVNPQREAPCGLSSCSVCSICMQGFKIKDNVGTTARRTGFSLRYGEGVYFSSVSGKANDYARFSQKT 456
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.800e-34 Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 526 GQNDFQLKVLTNRHASYPSLKEQFFTKWMKPW--EGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGG-GPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQK 957
G ++ L++L Y +L+ F +WMKP +G++IER++ +QV + E+H+ Y N +RFHGTSC+ C+F + GG PCG+ SCSVCNIC GFKL + TA+ T LR+GEG+Y +SVSGKANDYAS S K
Sbjct: 11 GSSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAK 157
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.200e-32 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 442 DDHRSRAEQRQLGPNTEPHVDRTFRG--GPGQNDFQLKVLTNRHASYPSLKEQFFTKWMKPW--EGLTIERIFKVQVPTAVYERHKEYSEQVHNTRRRFHGTSCSSACSFFMKFSGG-GPCGERSCSVCNICTEGFKLRGYLGRTAQMTNFSLRFGEGLYFSSVSGKANDYASSSQK 957
+D R A + + N E RT RG G + L+ L A +L + F +W+KP G++I RIF +QV V E+H+ Y + N +RFHGTSC+ C+F + GG PCGE SCSVCNIC GF+L + RTA+ T F LR+G G+Y +SVSGKANDYAS S K
Sbjct: 178 EDWRENATEDERKKNVEHEQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK 354 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig763.18891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig763.18891.1 >prot_F-serratus_M_contig763.18891.1 ID=prot_F-serratus_M_contig763.18891.1|Name=mRNA_F-serratus_M_contig763.18891.1|organism=Fucus serratus male|type=polypeptide|length=324bp CRLHGCSKEVFFDEETETVHDFCCRRHANLAINRGQWPLWDSEGDSQCELback to top mRNA from alignment at F-serratus_M_contig763:2203..6195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig763.18891.1 ID=mRNA_F-serratus_M_contig763.18891.1|Name=mRNA_F-serratus_M_contig763.18891.1|organism=Fucus serratus male|type=mRNA|length=3993bp|location=Sequence derived from alignment at F-serratus_M_contig763:2203..6195- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig763:2203..6195- >mRNA_F-serratus_M_contig763.18891.1 ID=mRNA_F-serratus_M_contig763.18891.1|Name=mRNA_F-serratus_M_contig763.18891.1|organism=Fucus serratus male|type=CDS|length=1944bp|location=Sequence derived from alignment at F-serratus_M_contig763:2203..6195- (Fucus serratus male)back to top |