prot_F-serratus_M_contig756.18816.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig756.18816.1
Unique Nameprot_F-serratus_M_contig756.18816.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length91
Homology
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BLAST of mRNA_F-serratus_M_contig756.18816.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.840e-22
Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    2 TFDLQQSFILDGFTIYFFKSDDLDRATNPFNISISEDEETGYVYSFTGVNTAGTPLGTGESFPFPATSRGRYVRFTPILDDEQWCSINEV 91
            TFDL  S  L   TIYF+KS++ DR TNPF +S S D  T +  SF  +NT  TPLG GE F FP  S GRYVRFT  L D+QW S+NEV
Sbjct:   30 TFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTT-FTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEV 118
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BLAST of mRNA_F-serratus_M_contig756.18816.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.190e-21
Identity = 53/89 (59.55%), Postives = 58/89 (65.17%), Query Frame = 0 
Query:    2 TFDLQQSFILDGFTIYFFKSDDLDRATNPFNISISEDEETGYVYSFTGVNTAGTPLGTGESFPFPATSRGRYVRFTPILDDEQWCSINE 90
            TFDL  S  L   TIYF+K DD+DRATNPF +S S D  T Y  SF  VNT  T +G GE F FP  S GRYVRFT  L D+QW SINE
Sbjct:   89 TFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTT-YTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINE 176
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig756.18816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRB9_ECTSI1.840e-2256.67F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JTK7_9PHAE2.190e-2159.55F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..91
e-value: 6.8E-9
score: 37.8
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 2..91
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 1..91
score: 10.004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig756contigF-serratus_M_contig756:111146..112016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig756.18816.1mRNA_F-serratus_M_contig756.18816.1Fucus serratus malemRNAF-serratus_M_contig756 111146..112016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig756.18816.1 ID=prot_F-serratus_M_contig756.18816.1|Name=mRNA_F-serratus_M_contig756.18816.1|organism=Fucus serratus male|type=polypeptide|length=91bp
MTFDLQQSFILDGFTIYFFKSDDLDRATNPFNISISEDEETGYVYSFTGV
NTAGTPLGTGESFPFPATSRGRYVRFTPILDDEQWCSINEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR000421FA58C