prot_F-serratus_M_contig742.18683.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig742.18683.1
Unique Nameprot_F-serratus_M_contig742.18683.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length221
Homology
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.210e-18
Identity = 69/239 (28.87%), Postives = 108/239 (45.19%), Query Frame = 0
Query:    1 MRVMLKQGADLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCKGYNLVADFLPI-----NGQCELVPGPMRNSETEGEKYAGAVAFCTMDCLQ--------------VIFSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGLV 220
            ++V LK G  ++   ++P  Y P+  A+ + H + L     V+ N ++  AS      K++     L    + +     N + E +P PM   E    +  GA  F  +D  +                F T  G++TP R P G  +  +Y QG++ E+LG+L+G      + D+  +      L+  L  +L RC E GL L A+K   FA E   CGKL     V H PERV+GL+
Sbjct:  167 LQVSLKPG--VTPTKSQPRRYSPDDRAFLERHVDALWQHSLVFRNPRSRWASAPRIVRKKEQDHDPLAGPRMTVYTRAENERTEAMPWPMPVLEVVIGELEGAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLI 403          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A2P4XTQ4_9STRA (RNA-directed DNA polymerase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XTQ4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.090e-16
Identity = 65/233 (27.90%), Postives = 101/233 (43.35%), Query Frame = 0
Query:    1 MRVMLKQGADLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMD-------------CLQVI-FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGL 219
            MR+ L+  A   +   +   Y   + A+ + + + L   G V  N  +  A  A+   K    G+ +  D+ P+N     + G   N     +   GA  F   D             C +++ F T DG+FTP+R PQG  +   + Q  M E    ++  +  + +DDV +F  S AE +  LR       +R L L A+K  LFA +   CGK+  G  V HDP R+  L
Sbjct:  521 MRITLRPDAQPYRSGVRK--YPDMQRAFLRTYVQELLDNGLVRRNNSSRWACAALPVRKAGGDGFRITVDYRPVNKLTVPLAGTTPNLTAVTQSVRGAYGFGQFDLFKRFWQLPLMEECQELLSFVTEDGVFTPLRVPQGASDSAMHFQLQMHECFREMLYDSVLVWIDDVLLFSTSPAEFLAKLRVFFQILRQRNLKLNAKKCTLFAPKVIWCGKVIDGEEVQHDPARLATL 751          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A2P4XNQ9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNQ9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.130e-14
Identity = 61/226 (26.99%), Postives = 99/226 (43.81%), Query Frame = 0
Query:   10 DLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCK-GYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMD-------------CLQVI-FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGLV 220
            + S ++A  G     K  +  EH   L   G +  N  +  AS A+   K   K G+ +   ++ +N +   + G M +        AG       D             C ++  F T DG++TP+R PQG  +   + Q  M  V   L+ +   + +DDV V+G++  E + NL+       E  L L A+K VL + E   CG++  G  +  DP+R+ GLV
Sbjct:  419 EWSHIDANQGNIHQRKIKFLDEHIAQLMQFGFIKKNNLSKWASNAVPVRKSDDKTGFRVTNAYIDVNKRTVPIAGTMPHLSVVLSFVAGVKFIAKFDMFKGFWQIMLAEECQEIFSFMTHDGVYTPLRVPQGATDSALHFQNQMQTVYKPLLYKGALVWIDDVIVYGKTEEEFLANLKLFYELTAEYRLKLNAKKSVLMSFEVSWCGRIIDGEGIRQDPQRLSGLV 644          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: H3GHY8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHY8_PHYRM)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-14
Identity = 64/235 (27.23%), Postives = 101/235 (42.98%), Query Frame = 0
Query:    1 MRVMLKQGAD--LSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMDCL------------QVIFS--TGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGL 219
            MRV L+  ++   S V   P +    + A+ + + +     G +  N  +  A  A+   K    GY +  D+ P+N     + GP  N     +   GA  F   D              Q +FS  T DG+FTP+R PQG  +   + Q  M +   +++  +  + +DDV +F +S +E I  LR       +R L L A+   LFA     CGK+  G  + HD  R+  L
Sbjct:  456 MRVALRPDSEPYRSGVRKHPDM----QRAFLRTYVQEPLDNGLIIRNNNSRWACAALPVRKSSGDGYRITVDYRPVNKMTMPLAGPTPNLAAVTQSVRGAYGFGQFDLFKGFWQMPLAAESQELFSFVTEDGVFTPLRVPQGASDSAMFFQLQMHDCFRSMLYDSVLVWIDDVLLFAKSPSEFIEKLRLFFQILRQRNLKLNAKTCTLFAHRVVWCGKVVDGEGLEHDSARLSAL 686          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.190e-13
Identity = 53/168 (31.55%), Postives = 76/168 (45.24%), Query Frame = 0
Query:   67 LVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMDCLQ--------------VIFSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGLV 220
            +  D    N + E +  PM   E    +  GA  F  +D  +                F T  G++TP R P G  +  +Y QG++ E+LG+L+G      + D+  +      L+  L  +L RC E GL L A+K   FA E   CGKL     V H PERV+GL+
Sbjct:    1 MTVDTRAENERTEAMLWPMPVLEVVIGELEGAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLI 168          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A2P4X8V4_9STRA (RNA-directed DNA polymerase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8V4_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 9.420e-12
Identity = 63/217 (29.03%), Postives = 92/217 (42.40%), Query Frame = 0
Query:   21 YGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCKG-YNLVADFLPINGQCELVPGPMRNSETEGE---------KYA------GAVAFCTMDCLQVIFS--TGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGL 219
            Y P ++ + + +   L   G +  N  +  AS  +   K      + L  D+ P+N Q   V   M    T+GE          YA      G   F   +  Q IFS  T DG+F+P+R PQGV +   + Q  M  VL  ++ R     +DD+ +F + +   +  L+         GL L   K  LF  E K CG+L  G  + HDP RV  L
Sbjct:  421 YPPLQAEFIRGYIRQLLERGLIRKNNASKWASAVVPVRKPGTDNQFRLTIDYRPVNAQTVPVADRM---PTQGEVIGAVRGAKHYARFHLPEGFWQFPLHEDSQEIFSFLTPDGVFSPLRVPQGVTDSALHFQAQMQTVLAPMIPRNVICWIDDILIFAKDMDSFLDALQEFFDIVGGHGLRLHPSKSSLFESEVKWCGRLISGDGIRHDPARVEAL 634          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A6A3GUM3_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GUM3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.390e-11
Identity = 59/209 (28.23%), Postives = 92/209 (44.02%), Query Frame = 0
Query:   30 KEHFELLCGTGTVYPNLQAVCASVAMAFPK----RQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMD-------------CLQVI-FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGLV 220
            +EH   L   G V  N  +  AS A+   K     + +G N   +++ IN +   + G M +        +G       D             C ++  F T DG++TP+R PQG  +   + Q  M  V   L+ +   I +DD+ V+GR+  + + NLR       +  L L A+K VL A E   CG++  G  +  DPER+  LV
Sbjct:   86 EEHVAQLLKFGFVKKNNLSKWASNAVPVLKPGSNNEFRGTN---NYIKINNKTVPIAGTMPHFSIILRHVSGVKFIAKFDMFKGFWQIMLAEECQEMFSFMTHDGVYTPLRVPQGATDSALHFQNQMQTVYKPLLYKGALIWIDDIIVYGRTEEDFLANLRLFYELTAKHRLKLNAKKSVLMAFEVSWCGRIIDGQCIRQDPERLSALV 291          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A8J6B5Q3_9EUKA (RNA-directed DNA polymerase n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B5Q3_9EUKA)

HSP 1 Score: 72.8 bits (177), Expect = 3.250e-11
Identity = 61/229 (26.64%), Postives = 97/229 (42.36%), Query Frame = 0
Query:    5 LKQGADLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPKRQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMDCLQVI--------------FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGL 219
            LK  +D     A P   G E +AW ++    +   G + P+L    + V +A  K   K   L  D+  +N        P+    +  E   G V F T+D                   F T +G F   R P G+    +++Q  M  VLG+L+GRA  + +DD+ V+G S AE   NL  ++ R +E  + L     V   +E +  G +  G +   DP+R+  +
Sbjct:  482 LKLASDARPFRAWPKKMGIEDAAWVRQEVANILRKGVIRPSLSPYASRVVLADKKGGDK--RLCVDYRQLNKLTADYEYPLPTISSLIEMLEGNVKFSTLDLKAAFNQVEIEEEAKRYTAFVTREGQFEYNRMPFGLKCAAAHMQMAMETVLGDLIGRACLVYIDDIVVYGASQAEHDANLDEVVDRLVEHKVGLGEAMCVFDREEIEYVGWIVGGGSKRIDPKRIEHI 708          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A6A3VFU4_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFU4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.870e-11
Identity = 63/229 (27.51%), Postives = 97/229 (42.36%), Query Frame = 0
Query:    3 VMLKQGADLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVCASVAMAFPK----RQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVAFCTMD-------------CLQVI-FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDP 213
            V LK+G +   V  KP  Y P +  + +EH   L   G V     +  AS A+   K     + +G N   +++ IN +   + G M +        +G       D             C ++  F T DG++TP+R PQG  +   + Q  M  V   L+ +   I +DD+ V+GR+  E + NLR       +  L L A+K VL A E   CG++  G      P
Sbjct:   49 VTLKKGEE--PVRCKPRRYPPAQLKFLEEHVAQLLKFGFVKKKNLSKWASNAVPVLKPGSNNEFRGTN---NYIKINNKTVPIAGTMPHFSIILRHVSGVKFIAKFDMFKGFWQIMLAEECQEMFSFMTHDGVYTPLRVPQGATDSALHFQNQMQTVYKPLLYKGALIWIDDIIVYGRTEEEFLANLRLFYELAAKHRLKLNAKKSVLMAFEVSWCGRIIDGQDSSRSP 272          
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Match: A0A6A4BF86_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BF86_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 9.930e-11
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 0
Query:  105 DCLQVI-FSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRADSICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRCGKLYMGTAVGHDPERVRGLV 220
            +C ++  F T DG++TP+R PQG  +   + Q  M  V   L+ +   I +DD+ V+GR+  + + NLR       +  L L A+K VL A E   CG++  G  +   PER+  LV
Sbjct:   34 ECQEMFSFMTHDGVYTPLRVPQGATDSALHFQNQMQTVYKPLLYKGALIWIDDIIVYGRTEEDFLANLRLFYELTAKHRLKLNAKKSVLMAFEVSWCGRIIDGQGIRQGPERLSALV 150          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig742.18683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0QQ04_9STRA1.210e-1828.87Integrase catalytic domain-containing protein n=5 ... [more]
A0A2P4XTQ4_9STRA3.090e-1627.90RNA-directed DNA polymerase n=2 Tax=Phytophthora p... [more]
A0A2P4XNQ9_9STRA1.130e-1426.99Reverse transcriptase domain-containing protein n=... [more]
H3GHY8_PHYRM1.190e-1427.23Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3J1E7_9STRA4.190e-1331.55Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A2P4X8V4_9STRA9.420e-1229.03RNA-directed DNA polymerase (Fragment) n=1 Tax=Phy... [more]
A0A6A3GUM3_9STRA1.390e-1128.23Reverse transcriptase domain-containing protein n=... [more]
A0A8J6B5Q3_9EUKA3.250e-1126.64RNA-directed DNA polymerase n=1 Tax=Carpediemonas ... [more]
A0A6A3VFU4_9STRA4.870e-1127.51Reverse transcriptase domain-containing protein n=... [more]
A0A6A4BF86_9STRA9.930e-1134.19Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 13..129
e-value: 2.9E-11
score: 45.1
NoneNo IPR availableGENE3D3.30.70.270coord: 83..201
e-value: 2.9E-11
score: 45.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 10..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig742contigF-serratus_M_contig742:123342..124046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig742.18683.1mRNA_F-serratus_M_contig742.18683.1Fucus serratus malemRNAF-serratus_M_contig742 123318..124151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig742.18683.1 ID=prot_F-serratus_M_contig742.18683.1|Name=mRNA_F-serratus_M_contig742.18683.1|organism=Fucus serratus male|type=polypeptide|length=221bp
MRVMLKQGADLSQVNAKPGVYGPEKSAWRKEHFELLCGTGTVYPNLQAVC
ASVAMAFPKRQCKGYNLVADFLPINGQCELVPGPMRNSETEGEKYAGAVA
FCTMDCLQVIFSTGDGLFTPMRGPQGVMNITSYLQGMMMEVLGNLVGRAD
SICVDDVKVFGRSVAELIVNLRAMLLRCMERGLFLAAQKLVLFAKEAKRC
GKLYMGTAVGHDPERVRGLV*
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