mRNA_F-serratus_M_contig738.18636.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 7.230e-150 Identity = 222/291 (76.29%), Postives = 249/291 (85.57%), Query Frame = 3
Query: 378 SNTAAPASASGDAAGEGVTFATTEVAQRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
SN A +A+G+ +G V F TE A RRNAD AFVTGANRGIGLEVTRQLLER KG VVAACRDPSSA L L A E RLD+V+MDI+DQ S+E AA H ++T+GRVDLLFNVAGVLGDGKNTPGPERS+RAMDRDWLRHT+EVN IGP+MLV+AL PLLESPAKKG+ GA+PPSVVVNFSARVGSIGDN LGGWHSYRMSKSALNMATKGIS+EL+RRRVW FSYHPGTT+TGLS+PFQANVKPEKLFT +TV +VL IVDSM+++LSGGFYAFDGS+I W
Sbjct: 5 SNPAMATAAAGEPSGGVVKFVKTEAAARRNADPGSVAFVTGANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESPAKKGDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA) HSP 1 Score: 314 bits (804), Expect = 2.130e-99 Identity = 157/264 (59.47%), Postives = 198/264 (75.00%), Query Frame = 3
Query: 462 RNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGRLDIVRMDIKDQASVEAAANHTKNTF-GRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
RNAD +T A+RG+GLE+ +QL RT+G+V+A+CR PS A L L + GR+ ++ +D+ DQASV+AAA H GR+D LFNVAG+LGDG+ TPGPERSL A+ RDWLRH+MEVN IGP+ML A+AP L + G+ A+ PSVVVNFSARVGSI DN LGGWHSYRMSKSALN ATK ++LELKR+ W F+YHPGTT+T LS+PFQANVKPEKLFT +FTV R+LD+ D+M + +GGFY + G+ + W
Sbjct: 32 RNADTGAVFLLTAASRGLGLELAKQLASRTQGHVIASCRQPSKALELQALAQS--HPGRMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRT---TGQGRAKTPSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA) HSP 1 Score: 291 bits (744), Expect = 7.270e-90 Identity = 137/271 (50.55%), Postives = 193/271 (71.22%), Query Frame = 3
Query: 453 AQRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADF-----EGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
A +RN D VTGA+RGIGL+ + L++RT+G +VA CR P +A LH T R++++++DI+DQ S++ +N +N++ RVD+L NVAG+LGDG +TPGPERSL +DRDW+ +M VN IGP+ML AL+PL+ SP ++G++ R +++ N SARVGSI DN LGGW+SYR SK+ALN AT+ +S ELKR+ WT + HPGTT+T LSKPFQ NV+ E+LF FTV+++LD++DSM ++ SGG Y + G IP+
Sbjct: 62 AMKRNQDPNAVHVVTGASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMASP-QRGKEDKRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAIPF 331
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA) HSP 1 Score: 281 bits (720), Expect = 8.040e-86 Identity = 139/276 (50.36%), Postives = 188/276 (68.12%), Query Frame = 3
Query: 450 VAQRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHK-LKATADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGA--------RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
V+ +RN D V G++RGIGL+ + L++R++G ++A CR P SA+ L++ L ++ R+ +++D++DQAS++AAA K ++ RVD LFNVAG+LGDGK+ PGPERSL +DRDW+ TM VN IGP+ML ALAP++ S R SV+VN SARVGSI DN LGGW+SYR SKSALN AT+ ++ ELKR+ WT + HPGTTNT LSKPFQ NV+ +LF FTV R+LD+VD M D SGG Y + G+ +P+
Sbjct: 91 VSSKRNGDPNAVFVVNGSSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTALPF 366
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.770e-85 Identity = 143/272 (52.57%), Postives = 189/272 (69.49%), Query Frame = 3
Query: 459 RRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDG-KNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKK--GEKG-----ARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
+RN D VTGA+RGIGL+ + LLERTKG +VA CR PS+A L +L+ + R+DIV +D+++Q+++E A + + + RVD LFNVAG+LGDG K TPGPERS+ MDR WL TM VN IGP+ML L+ ++ + K+ ++G RP +VVVN SARVGSI DN LGGW+SYRMSKSALN AT+ ++LELKR+ W + HPGTTNT LS+PFQANVK LF FTV ++LD+VD + D+ SGGFY + G + +
Sbjct: 113 KRNQDPRAVFVVTGASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRRKRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAGQSLSF 384
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA) HSP 1 Score: 277 bits (708), Expect = 5.460e-84 Identity = 136/276 (49.28%), Postives = 185/276 (67.03%), Query Frame = 3
Query: 462 RNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGR--LDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGA-----------RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
RN+D + V GA+RGIGL+ +LL TKG V+A CR P A L L +T D + R ++++++D+++Q S+E +A K +GRVDLL NVAG+LGDGKNTPGPERS+ ++R+W+ T +VN IGP+ML LAPL+ + G + A R VV N SARVGSI DN LGGW+SYRMSKSALN AT+ ++ ELKR+ VW + HPGTT+T LSKPFQ NV+ ++LF FTV +++++DSM + SGG Y + G IP+
Sbjct: 95 RNSDPDAVFLVNGASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQARRTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAIPF 370
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S3L7K7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7K7_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.240e-81 Identity = 130/270 (48.15%), Postives = 180/270 (66.67%), Query Frame = 3
Query: 456 QRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLL---ESPAKKGEKGA--RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
++RN D E VTGA+RGIGL+ + L +T+G +VA CR P A L++ T R++++ +D+++Q+S+EA +NT+ RVD+L NVAG+LGD K TPGPERSL +DR W ++ +N IGP+M+ L PLL P K + G RP +VV N SARVGSI DN +GGW+SYR+SK+ LN AT+ ++LEL R+ VW + HPGTT+T LSKPFQANVK E LF FTV ++L ++DS+ E SGG Y + G + +
Sbjct: 78 EKRNQDPEAVFVVTGASRGIGLQFVKALTTKTQGKIVACCRKPEQATQLNEFIGTLPNPSRVEVIPLDLEEQSSIEAFGTRVRNTYNRVDILLNVAGLLGDSKTTPGPERSLARVDRKWFETSLAINLIGPVMVTQELVPLLGQRRRPRKDNDDGTKDRPAAVVANLSARVGSISDNRIGGWYSYRISKAGLNQATRTMALELGRQSVWCVALHPGTTDTDLSKPFQANVKKESLFPVDFTVNQLLSVIDSVHAEHSGGLYDWAGKSVSF 347
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S3PXF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXF5_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.600e-81 Identity = 133/268 (49.63%), Postives = 184/268 (68.66%), Query Frame = 3
Query: 453 AQRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHK-LKATADFEGRLDIVR-MDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
A +RN D + VTGA+RGIGL++ + L RTKG +VA CR P A++LH +K+ E R +++ +D+++Q ++E +++ RVD+L+NVAG+LGDGKNTPGPERSLR++DR+W +M VN IGP+ L LAP++ S KK ++G SV+VN SARVGSI DN LGGW SYR SK+ALN A + ++ ELKR+ HPGTT+TGLSKPFQ NVK E+LF FT R++D VD M + +GG Y + G+ +P+
Sbjct: 85 ADKRNNDADAVFVVTGASRGIGLQILKDLATRTKGTIVACCRAPKEADHLHSFIKSLPTNESRRILLKSLDLEEQETIETLGKEIEDSHKRVDVLYNVAGILGDGKNTPGPERSLRSLDRNWAMKSMNVNYIGPVSLSQVLAPMMRSTLKKDDRGK---SVIVNLSARVGSISDNGLGGWISYRSSKAALNQANRTMAHELKRQGTLCICLHPGTTDTGLSKPFQGNVKKERLFPVEFTASRMIDAVDCMDELNTGGLYDWSGTALPF 349
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: A0A7S4MLR2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLR2_9STRA) HSP 1 Score: 270 bits (690), Expect = 2.830e-81 Identity = 135/283 (47.70%), Postives = 189/283 (66.78%), Query Frame = 3
Query: 453 AQRRNADEECTAFVTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKAT--ADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDG-KNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGAR--------------PPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
A +RNAD +TGANRGIGL+ + +L+R++G + A CR P AE L +KA+ A+ R+ +VR+D++DQ S+E AA+ + +GRVD L NVAG+LGDG ++TPGPERSL +DR+W ++ VN IGP+ML ALAPL+ + +G++ R PS+V N SARVGSI DN LGGW+SYR+SK+ALN AT+ ++ ELKR+ + HPGTT+T LS PFQ NV +LF FTV+++LD +D++ DE SGG Y + G +P+
Sbjct: 92 ANQRNADPHAVFVITGANRGIGLQFVKAVLDRSRGRIAACCRSPRDAEALEAVKASLPAEERERIRLVRLDVEDQMSIEGAADEIRTEYGRVDALLNVAGILGDGGESTPGPERSLGKIDREWTAKSLAVNVIGPVMLAQALAPLMRTKGGRGQRRTRRKTSDEGEEKEEQRAPSIVANLSARVGSISDNELGGWYSYRLSKAALNQATRTMAHELKRQGTRAVALHPGTTDTDLSAPFQRNVAEGRLFPVEFTVRQLLDCIDNLDDEHSGGLYDWSGRALPF 374
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Match: B7FYH7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYH7_PHATC) HSP 1 Score: 265 bits (677), Expect = 6.430e-81 Identity = 128/257 (49.81%), Postives = 175/257 (68.09%), Query Frame = 3
Query: 492 VTGANRGIGLEVTRQLLERTKGNVVAACRDPSSAEYLHKLKATADFEGRLDIVRMDIKDQASVEAAANHTKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKK----GEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISLELKRRRVWTFSYHPGTTNTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 1250
VTGA+RGIGL+ + L+ R +G++VA CR P AE L + AT + R+ IV +D++DQ S+E A K FGRVD+L NVAG+LGD K TPGPERSL ++RDW T+ +N IGP+ML L+PL+ K+ + R +V+ + SARVGSI DN LGGW+SYRMSKSALN AT+ ++LE+KR W + HPGTT+T LSKPFQ+NVK LF FT +++++++DSM++ SGG Y + G I +
Sbjct: 4 VTGASRGIGLQFVKTLILRARGSIVACCRSPEKAELLQEFIATLEDPRRIRIVSLDLEDQTSIERAGAEIKEMFGRVDMLLNVAGLLGDAKTTPGPERSLAKVERDWFEKTLAINTIGPVMLSKELSPLMMQRRKRKSSDNDTETRAVAVIASLSARVGSISDNGLGGWYSYRMSKSALNQATRTMALEMKRCSTWCIALHPGTTDTDLSKPFQSNVKDGSLFPVDFTTEKLMNVIDSMTENNSGGLYDWAGQAISF 260 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig738.18636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig738.18636.1 >prot_F-serratus_M_contig738.18636.1 ID=prot_F-serratus_M_contig738.18636.1|Name=mRNA_F-serratus_M_contig738.18636.1|organism=Fucus serratus male|type=polypeptide|length=353bp MFLGARFGIVSRAPGIQSLWRVLINTGTFRSEVSLVTRAFTIPSWARDDEback to top mRNA from alignment at F-serratus_M_contig738:233630..236291+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig738.18636.1 ID=mRNA_F-serratus_M_contig738.18636.1|Name=mRNA_F-serratus_M_contig738.18636.1|organism=Fucus serratus male|type=mRNA|length=2662bp|location=Sequence derived from alignment at F-serratus_M_contig738:233630..236291+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig738:233630..236291+ >mRNA_F-serratus_M_contig738.18636.1 ID=mRNA_F-serratus_M_contig738.18636.1|Name=mRNA_F-serratus_M_contig738.18636.1|organism=Fucus serratus male|type=CDS|length=2118bp|location=Sequence derived from alignment at F-serratus_M_contig738:233630..236291+ (Fucus serratus male)back to top |