mRNA_F-serratus_M_contig738.18632.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI) HSP 1 Score: 122 bits (306), Expect = 1.450e-26 Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 37 VLGFDCEWAASLTG-RRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDGVRTSDWE 423
VLGFD EW+ +G RR+VA++Q+S+ DGYT +FH+ R GI+P ALKELL N+ I+LAGV + DL L Y V GT +D+G LAG+HL V G RSL L A LL R L D VRTS+WE
Sbjct: 120 VLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERR---RGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWE 246
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A2H1VSX8_SPOFR (SFRICE_004621 n=3 Tax=Spodoptera TaxID=7106 RepID=A0A2H1VSX8_SPOFR) HSP 1 Score: 76.3 bits (186), Expect = 2.680e-11 Identity = 54/129 (41.86%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWE 423
LGFDCEW + R+ VA++Q+SSLDGY +F + + + +P +LKELLE+E I GVG K D L Y VE ++D+ LA + G G LA L++ LLR L VR SDWE
Sbjct: 71 LGFDCEWVTNNGKRQPVALVQLSSLDGYCGLFRLNTLKT-------VPLSLKELLEDESIYKVGVGPKDDSKYLHNDYAVELRSSLDIRHLA-EYCGYEPG--GLASLSSVLLRATLDKSWRVRCSDWE 189
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A7E5VEA2_TRINI (exonuclease 3'-5' domain-containing protein 2 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5VEA2_TRINI) HSP 1 Score: 69.3 bits (168), Expect = 4.530e-9 Identity = 52/129 (40.31%), Postives = 66/129 (51.16%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWE 423
LGFDCEW + R+ VA+IQ+SS DGY A+ + SE MP LK+LLE+E I GV K D L Y V +D+ LA GV G LA LA++ L L +R S+WE
Sbjct: 52 LGFDCEWVTEKSKRQPVALIQLSSFDGYCALIRL-------SEIKAMPACLKDLLEDETIYKVGVAPKDDGKYLLIDYSVVIKSTLDLRHLADQ-AGVEAG--GLASLASKTLGVALDKSWRIRCSNWE 170
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: UPI001568D0F9 (exonuclease 3'-5' domain-containing protein 2 n=2 Tax=Maniola TaxID=111919 RepID=UPI001568D0F9) HSP 1 Score: 67.8 bits (164), Expect = 1.450e-8 Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 1
Query: 4 DSVSRIPGDVFVLGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHL-GVSVGERSLARLAARLLRRHLP-TDGVRTSDWE 423
D + R + +GFDCEW R+ VA++Q+S+ DGY A+F + ++ +P AL++LL++E I GV K D L Y V G +DV L +HL G G LA L+ LL L T +R SDWE
Sbjct: 57 DKLRRKCWEHHAIGFDCEWVTEQGRRQPVALLQLSTFDGYCALFRL-------NQIKTIPKALQDLLQDETIYKVGVAPKDDARYLSQDYGVYMEGTLDVRHL--VHLCGYESG--GLASLSKSLLGIVLDKTWRIRCSDWE 187
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A835L4R9_SPOEX (3'-5' exonuclease domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835L4R9_SPOEX) HSP 1 Score: 66.6 bits (161), Expect = 3.320e-8 Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERS--LARLAARLLRRHLPTDG-VRTSDWE 423
+GFDCEW + R+ VA++Q+SSLDGY +F + + + + +L+ELLE+E I GV K D L Y VE +D+ HL + G L L++ LLR L +R SDWE
Sbjct: 71 MGFDCEWVTNNGKRQPVALVQLSSLDGYCGLFRLNTMKT-------VHKSLRELLEDESIYKVGVAPKDDGKYLHHDYSVELRSTLDI-----RHLAEACGFEGGGLGTLSSVLLRTVLDKSWRIRCSDWE 189
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A2A4J963_HELVI (3'-5' exonuclease domain-containing protein n=3 Tax=Heliothinae TaxID=95178 RepID=A0A2A4J963_HELVI) HSP 1 Score: 66.2 bits (160), Expect = 4.530e-8 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWEQCPFAVSI*WREWTLCFIYSHRTLR 498
LGFDCEW R+ VA++Q+SS DGY +F + + + +P +LK+LLE+E I GV D L Y V +DV LA + G G LA L++ LL L +R SDWE A + R+ T I +H +R
Sbjct: 71 LGFDCEWVTEKGKRQPVALVQLSSYDGYCGLFRLNTMKT-------LPESLKDLLEDETIYKVGVAPADDGKYLSLDYSVMMKSTLDVRHLAELG-GFEAG--GLATLSSVLLGAVLDKSWRIRCSDWE----ADELTKRQVTYAAIDAHVAIR 210
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A6J1X8J0_GALME (exonuclease 3'-5' domain-containing protein 2 n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1X8J0_GALME) HSP 1 Score: 64.3 bits (155), Expect = 1.860e-7 Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGER--SLARLAARLLRRHLPTDG---VRTSDWE 423
+GFDCEW +R VA++Q+S+ DGY +F + +PN+LKELLE++ I GV D L A Y + ++D+ H+ V G + LA L LL H+ D VR S+WE
Sbjct: 72 VGFDCEWVTEHGKKRPVALVQLSTFDGYCGLFRLNMLRP-------VPNSLKELLEDKTIYKVGVAPTDDAKYLFADYGINLNSSLDI-----RHIAVLCGRQPGGLASLTKSLL--HIILDKSWRVRCSNWE 190
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: A0A8D0DZ88_9SAUR (DNA helicase n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DZ88_9SAUR) HSP 1 Score: 64.3 bits (155), Expect = 2.630e-7 Identity = 51/150 (34.00%), Postives = 72/150 (48.00%), Query Frame = 1
Query: 1 RDSVSRIPGDVFVLGFDCEWAA--SLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWEQCPFAV 441
D VS +P VLGFD EW S +KVA+IQ+ + +FH++S S P LK LLE++ I+ AGVG + D +L ++V+ G +D+ LA L SL L L + L D VR +W+Q P
Sbjct: 61 EDIVSTLPEGA-VLGFDIEWPPCYSKGKEKKVALIQLCESEKKCYLFHISSMSS-------FPLGLKRLLEDDNIKKAGVGIEGDKWKLMRDFEVKLEGLVDLADLANEKLKCEE-IWSLNNLVKHLFHKQLLKDDLVRCGNWDQFPLTT 201
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: UPI000E6D8CE8 (exonuclease 3'-5' domain-containing protein 2 isoform X1 n=3 Tax=Hyposmocoma kahamanoa TaxID=1477025 RepID=UPI000E6D8CE8) HSP 1 Score: 63.2 bits (152), Expect = 4.380e-7 Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGMHLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWE 423
+GFDCEW R VA++Q+S+ DG+ +F + + +PN+LK LLE+E I GV D L Y V +D+ LA + S LA L+ LLR L +R S+WE
Sbjct: 71 VGFDCEWVTERGRRHPVALVQLSTFDGFCGLFRLNLMAT-------VPNSLKSLLEDETIYKVGVAATDDAKYLYQDYSVTLKSTIDIRHLAEL---CSYNPGGLAALSKSLLRVVLDKSWRIRCSNWE 189
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Match: UPI00067C7EC7 (uncharacterized protein LOC106140212 n=2 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067C7EC7) HSP 1 Score: 62.4 bits (150), Expect = 7.550e-7 Identity = 48/132 (36.36%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 40 LGFDCEWAASLTGRRKVAVIQMSSLDGYTAIFHVTSSGSRGSEAGIMPNALKELLENEEIRLAGVGGKADLCRLKAGYDVEGTGAMDVGVLAGM---HLGVSVGERSLARLAARLLRRHLPTDG-VRTSDWE 423
+GFD EW RR VA++Q+SS DGY +F + ++ +P LKE+LE+E I GVG D L YDV A+D+ +A M H G LA LA L L D + S+WE
Sbjct: 71 VGFDGEWVTDSGSRRPVALVQLSSFDGYCGLFRL-------NKLTTVPPLLKEILEDEHIYKVGVGPIDDAKHLLRDYDVAVKSALDIRHIAKMCDHHPG------GLAYLAKTTLGVILDKDWRISCSNWE 189 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig738.18632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig738.18632.1 >prot_F-serratus_M_contig738.18632.1 ID=prot_F-serratus_M_contig738.18632.1|Name=mRNA_F-serratus_M_contig738.18632.1|organism=Fucus serratus male|type=polypeptide|length=134bp MERMDPVFHLQPPDSADLPICTAIRLDTETNTRCVGEGTTADYPAEAWRSback to top mRNA from alignment at F-serratus_M_contig738:105024..106877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig738.18632.1 ID=mRNA_F-serratus_M_contig738.18632.1|Name=mRNA_F-serratus_M_contig738.18632.1|organism=Fucus serratus male|type=mRNA|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig738:105024..106877- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig738:105024..106877- >mRNA_F-serratus_M_contig738.18632.1 ID=mRNA_F-serratus_M_contig738.18632.1|Name=mRNA_F-serratus_M_contig738.18632.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig738:105024..106877- (Fucus serratus male)back to top |