mRNA_F-serratus_M_contig736.18592.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: A0A6H5LA60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA60_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.120e-86 Identity = 144/240 (60.00%), Postives = 179/240 (74.58%), Query Frame = 2
Query: 170 MPKPSAQDPSRSRSTV-KTYERPEPTPVVSHHAGTCLEDGLNT-ERAKIDDEQREAAVAAFKHEVEGSC-LDISSTRRALQSLGIRLDDALFQRLVESRW---------DEEQASGETGVDCDGFLRLYFSIFTPATTFGRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHELIMQPRDRSGWTPLMIASGNGHTMFVQFLLDESVDPEIASDS 853
M +PS+++ +R R V ++YERPEP ++S H+GT LEDGL E+ ++ D+Q EAA AAF+ E EG+ L + +RAL SL +RLDDALFQRLVE RW D G VD DGF +Y S+ PA TFGRHLRKAAGRGD++ VRELILRGCNPNT SG GETAL+ MAAFG++DCAKAL+ALCG +LIMQPRD++GWTPLM+ASGNGHT F++ LLDE VDP IA++S
Sbjct: 1 MSRPSSRNAARPRIPVSRSYERPEPKRIISKHSGTVLEDGLLACEKVELSDDQYEAARAAFRAEAEGAPRLGPQAVKRALLSLNLRLDDALFQRLVEDRWHSYTDSDDADHGPGGGGDSVDVDGFALVYGSVAAPAITFGRHLRKAAGRGDKELVRELILRGCNPNTGSGTGETALHTMAAFGRVDCAKALRALCGKDLIMQPRDKAGWTPLMVASGNGHTAFMRLLLDEGVDPGIANNS 240
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: D7FQJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ8_ECTSI) HSP 1 Score: 219 bits (559), Expect = 6.740e-66 Identity = 117/206 (56.80%), Postives = 147/206 (71.36%), Query Frame = 2
Query: 170 MPKPSAQDPSRSRSTV-KTYERPEPTPVVSHHAGTCLEDGLNTERAKIDDEQREAAVAAFKHEVEG-SCLDISSTRRALQSLGIRLDDALFQRLVESRW---------DEEQASGETGVDCDGFLRLYFSIFTPATTFGRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHELIMQPRDRS 754
M +PS+++ +R ++ V ++YERPEP ++S H GT LEDGL A++ D+Q EAA AAF+ E G S L + +RAL +RLDDALFQRLVE RW D G VD DGF R+Y S+ PA TFGRHLRKAAGRGD++ VR+LILRGCNPNT SG GETAL+ MAAFG++DCAKAL+ALCG +LIMQPRD++
Sbjct: 1 MSRPSSRNAARPKTPVSRSYERPEPKRIISKHLGTVLEDGLPACEAELSDDQYEAARAAFRAEAGGASRLGPQAVKRAL----LRLDDALFQRLVEDRWHSYTDSDDADHGPGGGGNSVDVDGFARVYGSVAAPAITFGRHLRKAAGRGDEELVRQLILRGCNPNTGSGTGETALHTMAAFGRVDCAKALRALCGKDLIMQPRDKA 202
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: A0A7S1CKK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKK1_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.100e-24 Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 2
Query: 347 KHEVEGSC-LDISSTRRALQSLGIRLDDALFQRLVESRWDEEQASGETGVDCDGFLRLYFSIFTPATTFGRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHELIMQPRDRSGW 760
KH+ +GS +D R L L +RLDD F R V+ W E + D FL LY +F P +G LR+AA RG D VR+L+ RGCNPNT G G TA++ FGQL+ L+ +CG +L + D GW
Sbjct: 49 KHDADGSGQVDKGELRSLLGELNLRLDDERFARYVDRYWTEADEDVSGLISLDEFLVLYAKVFAPNNKYGAALRQAAARGHADVVRDLVARGCNPNTGDGRGWTAVHHACEFGQLEVLTTLQDVCGLDLDIDGDDNYGW 187
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: A0A7S2WF93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF93_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.400e-21 Identity = 61/203 (30.05%), Postives = 101/203 (49.75%), Query Frame = 2
Query: 248 VVSHHAGTCLEDGLNTERAKIDDEQREAAVAAFKHEVEGSCLDISSTRRALQSLGIRLDDALFQRLVESRWDEEQASGET-GVDCDGFLRLYFSIFTPATTFGRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHEL--IMQPRDRSGWTPLMIASGNGHTMFVQFLLDESVDPEIAS 847
V+S HAGT L+D + E + E+ +A + L+++ ++ L ++G+RLD V +++ E + FL L ++ P +G LRKA+GRGD++ VR+L+ RGCNP G G +L+ A + ++ L +C ++ D +GWTPLM+A+ G +Q LL + PE S
Sbjct: 36 VISDHAGTVLDD-RDPEPSLTRSEEAKATEIFHSLDRSKLGLNLAEVQKGLGNIGVRLDPENLAAYVIPFFEQAGLRPEEDALSLQHFLELVGRVYAPGHKYGPRLRKASGRGDEERVRDLVFRGCNPRGTDGGGFNSLHYAAQYDRMGTIDLLLDICPDRTDELLNGADNAGWTPLMVAAAYGRVQALQKLLSRNARPEAIS 237
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: F0Y1N9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1N9_AURAN) HSP 1 Score: 75.5 bits (184), Expect = 8.530e-11 Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 224 YERPEPTPVVSHHAGTCLEDGLNTERAKIDDEQREAAVAAFKHEVE-GSCLDISSTRRALQSLGIRLDDALFQRLVES-RWDEEQASGETGVDCDGFLRLYFSIFTPATTFGRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDC-AKALKALCGHELIMQPRDRSGWTPLMIASG 784
Y P+ V+S G LED E ++ E+ E A AF + + G + + + ++ + +QRLVE+ D D +L L+ ++ PAT +G LR+AAGRG+ D +R+ RGC+ + G+G TAL+ A Q D A L L GH + R+ ++ +G
Sbjct: 22 YNAPKVEKVISDSPG--LEDD---EHPELSPEELERATLAFHTKQDPGGRITREHLKGLFVEMRLKFEGDQYQRLVETPHLGAVSFDASDKCDLDAWLALFARVYAPATRYGARLRRAAGRGEVDRMRDYAARGCDARGSDGLGFTALHCAAQHDQGDALAVLLSELLGHGAVDAANGRAKICEKLVEAG 206
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: A0A2D3VAS1_9PEZI (Glycerophosphocholine phosphodiesterase n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3VAS1_9PEZI) HSP 1 Score: 57.8 bits (138), Expect = 3.760e-5 Identity = 63/245 (25.71%), Postives = 98/245 (40.00%), Query Frame = 2
Query: 182 SAQDPSRSRSTVKTYER-PEPTPVVSHHAGTCLEDGLNTERAKIDDEQREAAVAAFKHEVEGSCLDISSTRRALQSLGIRLDDALFQRLVESRWDEEQASGETGV--DCDGFLRLYFSI-------------------FTPATTFGRHLRK-------AAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHELIMQPR---DRSGWTPLMIASGNGHTMFVQFLLD 820
+A+ P+R K ER PE P H + LE L+ + + QR+A V+ ++ G A Q + + L R+ + + ++ V D +GF L+ ++ FT +H+ K A V+ L+ G + N GETAL++ A FG DCA+AL A E ++ WTPL IAS NGH V+ L++
Sbjct: 314 AAEPPTRVPGAFKVEERDPEREPFEDSHTESLLEVILSY----LGESQRQAIVS---RDIYGRM----PLHYAAQYGXVFASEMLMGRMQDWHLADHSEGIDSAVWQDLEGFAPLHLAVIGGHYRTSKALLLVDDWHNFTDHRLTSKHVEKSGLSLALATKSNFHKIVKLLVDAGVDVNFQDEQGETALHIAARFGHEDCARALLAPVNGERLVNVEITXKSYSWTPLFIASVNGHMPIVKLLIN 547
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: F9XJK7_ZYMTI (Glycerophosphocholine phosphodiesterase n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XJK7_ZYMTI) HSP 1 Score: 57.0 bits (136), Expect = 6.690e-5 Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = 2
Query: 551 GRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKALCGHE--LIMQPRDRS-GWTPLMIASGNGHTMFVQFLLD 820
G L A V+ L+ G N N GETAL++ A FG DCA AL A E + ++ ++S WTPL IAS NGH V+ L+D
Sbjct: 580 GLSLALATKSNFHKIVKLLVDAGVNVNYQDEQGETALHIAARFGHEDCASALLAPVNGERQVNLELAEKSYNWTPLFIASVNGHLPIVKALVD 672
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Match: N1PE37_DOTSN (Glycerophosphocholine phosphodiesterase n=2 Tax=Mycosphaerellaceae TaxID=93133 RepID=N1PE37_DOTSN) HSP 1 Score: 56.6 bits (135), Expect = 8.640e-5 Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 2
Query: 551 GRHLRKAAGRGDQDFVRELILRGCNPNTASGMGETALYVMAAFGQLDCAKALKAL--CGHELIMQPRDRS-GWTPLMIASGNGHTMFVQFLLD 820
G L A V L+ G + N +GETAL+V A FG +CA+AL A + + ++ ++ GWTPL IAS NGH + + L+D
Sbjct: 455 GMSLELATKSNFHKIVGLLVDAGVDVNFRDDLGETALHVAARFGHEECARALLAANATDNRINLEIAEKEYGWTPLFIASVNGHLLIAKLLVD 547 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig736.18592.1 >prot_F-serratus_M_contig736.18592.1 ID=prot_F-serratus_M_contig736.18592.1|Name=mRNA_F-serratus_M_contig736.18592.1|organism=Fucus serratus male|type=polypeptide|length=321bp MPKPSAQDPSRSRSTVKTYERPEPTPVVSHHAGTCLEDGLNTERAKIDDEback to top mRNA from alignment at F-serratus_M_contig736:127910..132203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig736.18592.1 ID=mRNA_F-serratus_M_contig736.18592.1|Name=mRNA_F-serratus_M_contig736.18592.1|organism=Fucus serratus male|type=mRNA|length=4294bp|location=Sequence derived from alignment at F-serratus_M_contig736:127910..132203+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig736:127910..132203+ >mRNA_F-serratus_M_contig736.18592.1 ID=mRNA_F-serratus_M_contig736.18592.1|Name=mRNA_F-serratus_M_contig736.18592.1|organism=Fucus serratus male|type=CDS|length=1926bp|location=Sequence derived from alignment at F-serratus_M_contig736:127910..132203+ (Fucus serratus male)back to top |