mRNA_F-serratus_M_contig735.18579.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 2.330e-147 Identity = 221/253 (87.35%), Postives = 228/253 (90.12%), Query Frame = 3
Query: 405 LRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
LRANANPLLSAYGSLPLGTAVYNGHLKVV ELV G D CT DGG L LA AASR +V+IV FL D GVVDTEGVALCAAIEGCSEACV LLLRRQ G + RAYVNM HGTLPETYD+FVFQET LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDE FIGTPL+LATSYFRRFSPMRVHREMVRGLKGVIRLLRQEE VHAVSWTWPIDTGRS+ERASRKKSTSIARMLPLL+RRAA
Sbjct: 148 LRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAA 400
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 1.760e-140 Identity = 219/257 (85.21%), Postives = 232/257 (90.27%), Query Frame = 3
Query: 411 ANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAACLIIHL 1181
ANANPLLSAYGSLPLG AVY+GHL+VVRELV G D CT DGGAL LA AASR +V+IVAFL + GVVDTEGVALCAAIEGCSEACV LLLRRQ G A+TG RAYVNMDHGTLPETY+EFVFQET LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSY RRFS M+VHREMVRGLKGVIRLL+QEE VH+VSWTWPIDTGRS ER SRKKSTSIARM+PLL+RRAA L + L
Sbjct: 571 ANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSRKKSTSIARMVPLLKRRAATLRVLL 827
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 6.000e-127 Identity = 205/248 (82.66%), Postives = 210/248 (84.68%), Query Frame = 3
Query: 420 NPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
NPLLSA ELV G DGCT DGGAL LA AASRN V+IV FL D GVVDTEGVALCAAIEGCSEACV LLLRRQ KAST RAYVNMDHG+LPETYDEFVFQE LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEE VH+VSWTWPIDTGRS+ERASRKKSTSIARMLPLL+RRAA
Sbjct: 543 NPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAA 790
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.330e-118 Identity = 201/293 (68.60%), Postives = 208/293 (70.99%), Query Frame = 3
Query: 429 LSAYGSLPLGTAVYNGHLKVV-RELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAI-----------------------------------------------EGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
LSAYGSLPL RELV GID CT DGGAL L AASR +V+IV FL D GVVDTEGVALCAAI EGCSEACV LLLRRQ G A+TG RAYVNMDHGTLPETYDEFVFQET LVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFS M VHREMV LKGVIRLLRQEE VH+VSWTWPID GRS+ERASRKK TSIARM+PLL+RRAA
Sbjct: 162 LSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAA 454
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 231 bits (590), Expect = 8.400e-69 Identity = 147/304 (48.36%), Postives = 181/304 (59.54%), Query Frame = 3
Query: 303 LIDAGANVDSRLDD------GATPLFFAAKDGRLEAVRVLLRAN--------ANPLLSAYG--SLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATSYFRRFSPMRVHREMVR-GLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRA 1160
L+ AGA++++R+D G TPL AA G + + +L+ A ANP+L+AY SLPL A NG L VVREL QR GIDGC+CDGGA L AAS+N V+IV FL D GVVD EG+ALCAA+EG E C+ LLLR Q A+ RAY NM H T Y +F +T LVS F LG F++PR RLLL AGAD S VR+ EG E + + TPL +A S + E V GLKGVIRLL+Q + VHA SW WP ++ +KST I RMLP L+RRA
Sbjct: 83 LVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY-----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWP---------SALEKSTPIVRMLPGLKRRA 372
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 209 bits (531), Expect = 7.970e-60 Identity = 122/268 (45.52%), Postives = 155/268 (57.84%), Query Frame = 3
Query: 294 MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLA--TSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRS 1091
MV LI+AGANVDSR+ DG+T ++ AA G LEAV +L + ANPLL + PL A + GHL VV+ELVQR GIDGC +G L AA N+ I+ FL D GV+DT+G ALC AIEG +EAC+ LL+ R+ G R Y N+D+ +E L+ F G HAPR R LL+ GAD + VRF + DE + + L +YF+ RV GLKGV+RLL+QE VHA SW WP DT R+
Sbjct: 143 MVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRVD-----GLKGVVRLLQQEAAVHANSWAWPTDTDRA 394
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 204 bits (518), Expect = 5.540e-58 Identity = 123/268 (45.90%), Postives = 152/268 (56.72%), Query Frame = 3
Query: 294 MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM--RVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRS 1091
MV LIDAGANVDSR+ +G+T ++ AA G L+AV++LL+ ANP+L + PL A + GHL VV+ELVQR G+DGC+ +G L AA N+ I+ FL D GV DT+G ALC AIEG SEAC+ LL+ R+ G A Y N D + +LV F G +APR R LL+ GAD VRF GE G PL A R E V GLK V+RLLRQE+ VHA SW WPIDT R+
Sbjct: 130 MVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKG-LGE----IAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRA 381
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 153 bits (386), Expect = 5.180e-41 Identity = 82/97 (84.54%), Postives = 83/97 (85.57%), Query Frame = 1
Query: 1 TDIDRRCGDTNRTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEARPGGFMVDGIYGTPLHVAATKGFSQ 291
T IDR CGDTN+TPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHHSVYH HLAVSKDLIEAGADLEAR GG TPLHVAATKGF Q
Sbjct: 19 TGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGG------KDTPLHVAATKGFCQ 109
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 135 bits (339), Expect = 5.350e-32 Identity = 115/307 (37.46%), Postives = 150/307 (48.86%), Query Frame = 3
Query: 321 NVDSRLD-DGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGS---LPLGTAVYNGHLKVVRELVQRVGIDGCTCDG-GALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMD--HGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVR---------FPCDSDEGEEDEGFIGTPLDLATSYF--RRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTG---------RSIERASRKKSTSIARMLPLLRRRA 1160
NVD R DG TPLF A +G+LEA R LLRANANPL++ LPL +A NG+L V+REL+QRVGI+GC G + L A V +A L GVVDT G AL + EA V LL+ G AYVN+ +GT P + + SF PR ARLL+EAGAD T+ +R F C TPL L ++ + ++ + L+G+ RLL Q E VHA SW WP +G + A+ + + R+LP+LRRRA
Sbjct: 125 NVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDT-GQALTISAGLGREASVKYLLQNHAKHYGPG--AYVNVRDRNGTTP------LLSSIYVCGVDEQSSF--PRVARLLVEAGADTTTELRRTNSMGVVLFSC-------------TPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRA 407
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.080e-31 Identity = 116/310 (37.42%), Postives = 156/310 (50.32%), Query Frame = 3
Query: 294 MVVLIDAGANVDSR-LDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGS------LPLGTAVYNGHLKVVRELVQRVGIDGCTC-DGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDH-GTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYF--RRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTG-------RSIERASRKK--STSIARMLPLLRRRAA 1163
M +++ AGA V++R G TPLF AA+ GRL +V+VLLR A+ LL A LPL A + GHL VVRELVQ+VG+ GC GGA L AS ++I+AFL D GVVD G L +AI+ V LL+ R+ G ++ YV+ + G T F +L + + R + L+EAGA V E+ + T L Y R + + EM+ GL+G+ RLL Q+E V A SW WP G R I R +K S ++A M+PLLRRR A
Sbjct: 163 MSLILGAGAGVNARHRPGGETPLFVAARLGRLLSVKVLLRFKADALLPAQFENRKDKWLPLDVAAHRGHLAVVRELVQQVGLGGCGGPSGGADALVITASEGRLDIMAFLLDAGVVDN-GDGLRSAIKAGHSKSVRLLMERRAGD----VKQYVSSESIGDEARTVLFHCFHAQALAPS-------SCRIMQTLIEAGATTRVNVMI-----NYEDRPPTMLTDLVQYADYLINRGRTTLTAEEEMMHGLRGLRRLLMQKEAVTATSWAWPAGEGGMRCGGTRGIRRTKKKTKPSAALATMMPLLRRRDA 455 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig735.18579.1 >prot_F-serratus_M_contig735.18579.1 ID=prot_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=polypeptide|length=299bp MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGback to top mRNA from alignment at F-serratus_M_contig735:285202..286391- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig735.18579.1 ID=mRNA_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=mRNA|length=1190bp|location=Sequence derived from alignment at F-serratus_M_contig735:285202..286391- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig735:285202..286391- >mRNA_F-serratus_M_contig735.18579.1 ID=mRNA_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=CDS|length=1794bp|location=Sequence derived from alignment at F-serratus_M_contig735:285202..286391- (Fucus serratus male)back to top |