mRNA_F-serratus_M_contig73.18523.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 296 bits (757), Expect = 2.760e-94 Identity = 143/172 (83.14%), Postives = 158/172 (91.86%), Query Frame = 1
Query: 7 RPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAG--AKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
+PSLLV+RAR+RFE KGGVVMEFTSIDGVSVRPDGVAL+TSPS+PPG+ A G +++TSRLVLDCMGNASP+VRQIRWGKKPEGVCLVVGSCARGY+PD NKSGDIIYAN PIL KG+G G+QYFWEAFPAGSGP DRTTYMFAYMDADPRRTSLEDMMDDYW+LLP+
Sbjct: 259 KPSLLVDRARRRFETKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGSKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRTTYMFAYMDADPRRTSLEDMMDDYWELLPQ 430
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: D7G111_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G111_ECTSI) HSP 1 Score: 236 bits (602), Expect = 8.220e-75 Identity = 119/157 (75.80%), Postives = 135/157 (85.99%), Query Frame = 1
Query: 7 RPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEA--KQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRT 471
+PSLLV+RAR+RFE KGGVVMEFTSIDGVSVRPDGVAL+TSPS+PPG A+G A +++TSRLVLDCMGNASP+VRQIRWGKKPEGVCLVVGSCARGY+PD NKSGDIIYAN PIL KG+G G+QYFWEAFPAGSGP DR + + P+RT
Sbjct: 161 KPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGGKPPASGAATGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHR-TLPSSSPKRT 316
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A836CJX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX3_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.340e-70 Identity = 106/165 (64.24%), Postives = 131/165 (79.39%), Query Frame = 1
Query: 7 RPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDG--VALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDD 495
+PS++V+RAR RFE GGVVME +I GVSVRP+G VA+AT P+ P +T+RLVLDCMGN SP+VRQIRWG+KP+G+CLVVG CARG+DP+ N SGDIIYAN+P+L KG+G G+QYFWEAFPAGSGP DRT YMF Y+DADP+R SL +M++D
Sbjct: 28 KPSVMVQRARARFEAAGGVVMEQAAISGVSVRPNGASVAVATGPADKP--------VTSNVTARLVLDCMGNGSPMVRQIRWGRKPDGMCLVVGCCARGFDPETNTSGDIIYANSPVLDKGDGVGVQYFWEAFPAGSGPGDRTIYMFQYLDADPKRPSLSNMLED 184
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A7S0KT21_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KT21_MICPS) HSP 1 Score: 204 bits (519), Expect = 3.050e-59 Identity = 103/170 (60.59%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 7 RPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
+PSLL++ R FE KGGVV+E T+I G+SVRPDG L TSP G G +T+RLV+DCMG ASP+VRQ RWG+KP+GVCLVVG+CARG+D N+S D+IY T I +G QYFWEAFPAGSGP DRTTYMF Y+DA P R SL D++DDYWDL+PK
Sbjct: 231 KPSLLLDAIRGNFEAKGGVVLEKTAISGISVRPDGAELDTSPLD----GGDGPGG---ITARLVVDCMGFASPIVRQARWGQKPDGVCLVVGACARGFDESANESADLIYTTTDITAIDQSKG-QYFWEAFPAGSGPEDRTTYMFTYIDAHPSRPSLADLLDDYWDLMPK 392
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A7S1KJ18_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KJ18_9ALVE) HSP 1 Score: 187 bits (475), Expect = 3.450e-56 Identity = 94/170 (55.29%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 10 PSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQG-IQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
P L+ R+RFE+ GG V+E + GV+V PDG +L P G+++ +TSRLV+DCMG SP+ RQ+R G+KP+G+CLVVGSCARGY DKN GD+IY++TP+ +G G +QYFWEAFPAGSGP DRTTYMF Y DAD R SLE + +DYW LLPK
Sbjct: 101 PLKLLAVVRKRFEEAGGTVLENHRLKGVTVHPDGASLLVQP-----VGSESP---VSVTSRLVVDCMGFNSPISRQLRKGQKPDGICLVVGSCARGYPEDKNVRGDLIYSDTPLYRRGEGPSRVQYFWEAFPAGSGPTDRTTYMFTYCDADASRPSLETLFEDYWTLLPK 262
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK) HSP 1 Score: 194 bits (492), Expect = 8.050e-56 Identity = 94/166 (56.63%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 19 LVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
LVE A RF GG V+EF + G++V + L T G+G +++ ++LVLDCMG ASP+VRQ+R G+KP+GVCLVVGSC RGY + NKSGDIIYANTP++ K +G +QYFWEAFPAG+GP DRTTYMF YMDA P R S+ ++ DDYW+LLPK
Sbjct: 165 LVEAAAARFRAAGGTVLEFAATTGITVYDNAAVL-----TLEGSGGDEI--VREVGTKLVLDCMGMASPIVRQLRHGQKPDGVCLVVGSCGRGYPEENNKSGDIIYANTPVMEKESGSSVQYFWEAFPAGTGPTDRTTYMFTYMDAHPDRPSVRELFDDYWELLPK 323
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A7S1XBZ8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XBZ8_9CHLO) HSP 1 Score: 184 bits (468), Expect = 4.770e-55 Identity = 94/170 (55.29%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 10 PSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNG-QGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
PS LV ARQRFE GG VME + GV V P+G L+ S + ++++RLVLDCMG+ SP+ RQ+RWG KP+G+CLVVGSC+RG PD NKS DII NTP+ P +QYFWEAFPAGSGP DRTTYMF Y+DA+P R SLE + DDYW +P+
Sbjct: 32 PSKLVVYARQRFEAAGGRVMEGCGVQGVEVAPNGAKLSLDGS-----------DVSELSARLVLDCMGHGSPITRQLRWGNKPDGMCLVVGSCSRGPWPD-NKSADIIATNTPLQPPDAPVTNLQYFWEAFPAGSGPLDRTTYMFTYLDAEPHRPSLEQLFDDYWQHMPE 189
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A0G4G7C6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G7C6_VITBC) HSP 1 Score: 187 bits (475), Expect = 5.240e-53 Identity = 94/170 (55.29%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 10 PSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQG-IQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
P L+ R+RFE+ GG V+E + GV+V PDG +L P G+++ +TSRLV+DCMG SP+ RQ+R G+KP+G+CLVVGSCARGY DKN GD+IY++TP+ +G G +QYFWEAFPAGSGP DRTTYMF Y DAD R SLE + +DYW LLPK
Sbjct: 235 PLKLLAVVRKRFEEAGGTVLENHRLKGVTVHPDGASLLVQP-----VGSESP---VSVTSRLVVDCMGFNSPISRQLRKGQKPDGICLVVGSCARGYPEDKNVRGDLIYSDTPLYRRGEGPSRVQYFWEAFPAGSGPTDRTTYMFTYCDADASRPSLETLFEDYWTLLPK 396
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A0A1Y1HH77_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HH77_KLENI) HSP 1 Score: 184 bits (468), Expect = 3.160e-52 Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 10 PSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILPKGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
P+ L+E A++RF ++GGV++E T ++ V V DG L GE K++ ++LV+D MG+ASP+VRQ+RWG+KP+GVCLVVG+CARG+ + N GD+I N P KG +QYFWEAFPAGSGP DRTTYMF Y+DA P R SLE +++DYW L+PK
Sbjct: 216 PAKLIESAKRRFVERGGVLLEKTGLENVDVFADGAVLNL-------------GE-KKLVAKLVIDAMGHASPIVRQLRWGRKPDGVCLVVGACARGFPEETNTGGDVILTNAPATRKGRSP-LQYFWEAFPAGSGPGDRTTYMFTYLDAHPDRPSLESLLEDYWQLMPK 369
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Match: A8HX01_CHLRE (Glycine/D-amino acid oxidase-like protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HX01_CHLRE) HSP 1 Score: 179 bits (455), Expect = 8.340e-51 Identity = 89/171 (52.05%), Postives = 115/171 (67.25%), Query Frame = 1
Query: 7 RPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAGAKATGEAKQMTSRLVLDCMGNASPLVRQIRWGKKPEGVCLVVGSCARGYDPDKNKSGDIIYANTPILP-KGNGQGIQYFWEAFPAGSGPRDRTTYMFAYMDADPRRTSLEDMMDDYWDLLPK 516
RP LV+ R + E GG V+E ++ G+SV P+G +L + GAGA A ++T+RLV+DCMG+ SP+VRQ+RWG KP+GVCLVVG+C G+ P N + D+I NTP+ P + QYFWEAFPA SGP DRTTYMF Y+DA P R L MMDDYW L+P+
Sbjct: 143 RPDALVQLMRAKLEAAGGAVIEQAALAGISVHPNGCSLDVKTDSGAGAGAAAA----RLTARLVVDCMGHFSPIVRQVRWGTKPDGVCLVVGTCGSGFAPGNNTTADVILTNTPLQPAEAAFNRAQYFWEAFPAASGPSDRTTYMFTYIDAAPYRKPLAAMMDDYWRLMPQ 309 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig73.18523.1 >prot_F-serratus_M_contig73.18523.1 ID=prot_F-serratus_M_contig73.18523.1|Name=mRNA_F-serratus_M_contig73.18523.1|organism=Fucus serratus male|type=polypeptide|length=173bp ATRPSLLVERARQRFEDKGGVVMEFTSIDGVSVRPDGVALATSPSTPPGAback to top mRNA from alignment at F-serratus_M_contig73:440639..448948- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig73.18523.1 ID=mRNA_F-serratus_M_contig73.18523.1|Name=mRNA_F-serratus_M_contig73.18523.1|organism=Fucus serratus male|type=mRNA|length=8310bp|location=Sequence derived from alignment at F-serratus_M_contig73:440639..448948- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig73:440639..448948- >mRNA_F-serratus_M_contig73.18523.1 ID=mRNA_F-serratus_M_contig73.18523.1|Name=mRNA_F-serratus_M_contig73.18523.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig73:440639..448948- (Fucus serratus male)back to top |