mRNA_F-serratus_M_contig73.18522.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig73.18522.1
Unique NamemRNA_F-serratus_M_contig73.18522.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 1.040e-127
Identity = 185/226 (81.86%), Postives = 206/226 (91.15%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPETRFRAARALDAWEYGSGCDYRYQPP 680
            ++DLEFQRVL+GFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRH+KRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE V  NLIVDLLANNF+SMD+LGNPVLKPFLQDV+QF PLARVLVGVT  APLSIPPLLLHVG++PLADW GHF  MGLY+ALHR+  P L++RL  MS E R+R++R LDAWEYGSG DYRY+ P
Sbjct:  436 IEDLEFQRVLFGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLIVDLLANNFRSMDKLGNPVLKPFLQDVVQFGPLARVLVGVTLDAPLSIPPLLLHVGIVPLADWIGHFFSMGLYSALHRLAGPWLRKRLPKMSKEDRYRSSRLLDAWEYGSGSDYRYEGP 661          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 1.970e-78
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 3
Query:  108 SGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTG 518
            SGMQSPLSFGGFACLTRHVKRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE VD NLIVDLLANNFKSMD+LGNPVLKPFLQDV+QF PLARVL GVT  APLSIPPLLLHVG++PLADW G
Sbjct:    5 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 141          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A150GR87_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR87_GONPE)

HSP 1 Score: 253 bits (645), Expect = 1.970e-77
Identity = 127/226 (56.19%), Postives = 163/226 (72.12%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQE---RLSSMSPETRFRAARALDAWEYGSGCDYR 668
            L+D+ F+RVL+GFFPT+K +PL   +DRV QIGDASG+QSPLSFGGF  LTRH+ R++ AL+EALEAD +D+ SLG+V+AY P L+S+WM QK+MSV +G+T  P LI  +LA NFK+M++LG PV+KPFLQDVIQF P+ + +       PLSIP L+ HVG  PL +W GH   +G YTALH    A  L+E   R   +   +RF   R LDAWEYGSG DY+
Sbjct:  289 LEDITFKRVLFGFFPTFKNTPLKPTFDRVIQIGDASGLQSPLSFGGFGALTRHLARLTDALTEALEADCVDRGSLGLVHAYNPGLSSSWMMQKAMSVRLGDTPSPQLINRMLAGNFKAMERLGEPVMKPFLQDVIQFGPMVQTMGAQMLTDPLSIPGLIAHVGPGPLLEWLGHMGALGSYTALHGAAQAAGLREAVARAPGIGARSRFALRRLLDAWEYGSGKDYK 514          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A836C4K2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4K2_9CHLO)

HSP 1 Score: 255 bits (652), Expect = 4.910e-77
Identity = 128/225 (56.89%), Postives = 157/225 (69.78%), Query Frame = 3
Query:    6 DDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSP----ETRFRAARALDAWEYGSGCDYR 668
            DD++F+RVL+GFFPT+K +PL   +DRV QIGDASG+QSPLSFGGF  LTRH+ R++KALSEALEADLLDK SLG V AY P L+S+WM Q++MSV  G+   P+LI  +LA NF+SM + G+PV+KPFLQDVIQF P+   L    F  P SIP L+ HVG  PL +W GH   +G YTALH         +  + SP      RF   R LDAWEYGSG DY+
Sbjct:  434 DDIDFKRVLFGFFPTFKNTPLQPAFDRVIQIGDASGLQSPLSFGGFGALTRHLARLNKALSEALEADLLDKASLGRVAAYNPGLSSSWMMQRAMSVRQGDAPTPDLINRMLAGNFRSMQRFGDPVMKPFLQDVIQFGPMMTTLTAQMFGDPASIPRLISHVGPGPLLEWVGHMASLGAYTALHSAATAAGARKQVAESPVLTARERFTLNRLLDAWEYGSGLDYK 658          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO)

HSP 1 Score: 254 bits (648), Expect = 7.810e-77
Identity = 120/222 (54.05%), Postives = 154/222 (69.37%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPETRFRAARALDAWEYGSGCDYR 668
            L+ LE  R+L+GFFPTY++SPL   W+RV Q+GDASG+QSPLSFGGF  LTRH+ R+  A++EAL+A+ LDK+SL  VNAY P L+  WM Q++MSV  GE  DPN I  LLA NF +M + G+PVLKPFLQDV+Q+ PL   LV    + PL +P +  HVG+LP+ DW  HF  +G YT LH    P +Q      S + RF+  R LDAW+YGSG D+R
Sbjct:  395 LEFLEVLRILFGFFPTYRQSPLQPRWNRVLQVGDASGIQSPLSFGGFGALTRHLGRLRSAITEALDAEALDKDSLAQVNAYNPGLSGAWMLQRAMSVRPGERPDPNFINSLLAKNFAAMQRFGDPVLKPFLQDVVQYGPLGLTLVSQMLSDPLFVPAIFRHVGVLPMLDWLKHFTALGAYTVLHTAGRPVVQSLAERSSGKQRFKLNRLLDAWKYGSGSDFR 616          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A8J4AY36_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AY36_9CHLO)

HSP 1 Score: 251 bits (642), Expect = 8.150e-76
Identity = 125/226 (55.31%), Postives = 164/226 (72.57%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQERLSSMS---PETRFRAARALDAWEYGSGCDYR 668
            L+D+ F+RVL+GFFPT+K +PL   +DRV Q+GDASG+QSPLSFGGF  LTRH+ R++ AL+EA+E D LD+ESL +V+AY P L+S+WM QK+MSV  GE   P+LI  +LA NFK+M++LG+PV+KPFLQDVI+F P+ R +       PLSIP L+ HVG +PL +W GH   +  YTAL+ V  A  L+ + +S S   P  RF   R LDAWEYGSG DY+
Sbjct:  405 LEDITFKRVLFGFFPTFKDTPLRPTFDRVIQVGDASGLQSPLSFGGFGALTRHLARLTTALAEAVETDALDRESLALVHAYNPGLSSSWMMQKAMSVRKGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVIKFGPMMRTMTAQMLTDPLSIPGLISHVGPMPLLEWLGHMTNLAAYTALNGVASAVDLRNKAASASFLTPRERFALNRLLDAWEYGSGQDYK 630          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: D8THU2_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8THU2_VOLCA)

HSP 1 Score: 243 bits (620), Expect = 3.950e-74
Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVA-PQLQERLSS---MSPETRFRAARALDAWEYGSGCDYR 668
            L+D+ F+RVL+G FPT+K +PL   +DRV QIGDASG+QSPLSFGGF  LTRH+ R++ AL+EA+EAD LD+ SL +V +Y P L+S+WM QK+MSV  GE   P+LI  +LA NFK+M++LG+PV+KPFLQDV+QF P+ R +       P SIP L+ HVG  PL +W  H   +  YTALH   +   L+  +S    ++P  RF   R LDAWEYGSG DY+
Sbjct:  250 LEDITFKRVLFGMFPTFKDTPLRPAYDRVIQIGDASGLQSPLSFGGFGALTRHLARLTAALTEAVEADALDRGSLSLVQSYNPGLSSSWMMQKAMSVRRGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVVQFGPMMRTMAAQILTDPASIPSLIRHVGPAPLLEWLSHMANLAAYTALHGAASMADLRTAVSGAAVLTPRERFALNRLLDAWEYGSGMDYK 475          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A835T427_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835T427_CHLIN)

HSP 1 Score: 246 bits (628), Expect = 2.000e-73
Identity = 120/229 (52.40%), Postives = 161/229 (70.31%), Query Frame = 3
Query:    3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQERLS------SMSPETRFRAARALDAWEYGSGCDYR 668
            L+D++F+RVL+GFFPT+K +PL   +DR+ QIGDASG+QSPLSFGGF  LTRH+ R++ AL+EA+EAD LD+ +LG+++AY P L+S+WM QK+MSV  G+   P LI  +LA NF++M++LG+  +KPFLQDVIQF P+   +       PLS+P L+ HVG  PLA+W GH   +G YTALH    A  L+  L+       + P  RF   R LDAWEYGSG DY+
Sbjct:  439 LEDIQFKRVLFGFFPTFKDTPLQPAFDRIIQIGDASGLQSPLSFGGFGALTRHLARLTNALTEAMEADALDRNALGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELISRMLAGNFRAMEKLGDATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLGHMANLGAYTALHGAAGAAGLRAALAPGGAAAGLPPRARFALGRLLDAWEYGSGKDYK 667          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A7S3PA49_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA49_9STRA)

HSP 1 Score: 233 bits (594), Expect = 4.990e-73
Identity = 117/220 (53.18%), Postives = 153/220 (69.55%), Query Frame = 3
Query:    9 DLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSM-SPETRFRAARALDAWEYGSGCDY 665
            DL+F+RVL+ FFPTY+ +PL   + RV  +GDASG+QSPLSFGGF  LTRH++RIS A+ +AL  DLL KE LG +NAY P L++TWMFQ+SMSV +G++VD   +  LLA NF+ MDQ G   +KPFLQDV++F  L   L G   A P  +P ++ HVG+  LADW GH   MGLYT L   V+P  +  +SSM +P  RF   R ++AW++GSG DY
Sbjct:   17 DLDFKRVLFAFFPTYRDAPLKPAYSRVLAVGDASGIQSPLSFGGFGALTRHLERISGAVHDALADDLLHKEDLGKINAYTPNLSATWMFQRSMSVRMGQSVDSKFVNRLLATNFEQMDQAGLRTIKPFLQDVVRFDGLVSSLAGSFVADPTFMPQIIAHVGVPALADWLGHVSMMGLYTVLDAAVSPIAEPIVSSMKNPRQRFHWKRQMEAWKFGSGRDY 236          
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A7S2N0B1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0B1_9STRA)

HSP 1 Score: 231 bits (589), Expect = 2.000e-72
Identity = 115/220 (52.27%), Postives = 151/220 (68.64%), Query Frame = 3
Query:    9 DLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPE-TRFRAARALDAWEYGSGCDY 665
            DL+ +RVL+ FFPTY+ SPL   W RV  +GDASG+QSPLSFGGF  LTRH++R+S  +SEALEAD L K+ L  +NAY P L++ WMFQK+MSV +G+ VDP  +  LLA NF  MD++G   +KPFLQDVI+   L   L     A PL +P ++ HVG+  L DW GH   MGLYTALH  V P ++  + +M  +  RF+  R ++AW++GSGCDY
Sbjct:   19 DLDVKRVLFAFFPTYRDSPLKPMWSRVLAVGDASGIQSPLSFGGFGALTRHLERLSDGISEALEADCLHKDDLAEINAYTPNLSAAWMFQKAMSVRMGQNVDPKFVNRLLATNFDLMDKMGIDTIKPFLQDVIRIDGLFGSLSRAFVADPLFMPQIVSHVGIPALVDWMGHVGMMGLYTALHSGVTPVIKPFVKNMKNDRARFQWNRRMEAWKFGSGCDY 238          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L433_9PHAE1.040e-12781.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7P0_ECTSI1.970e-7888.32Glycine/D-amino acid oxidase-like protein n=1 Tax=... [more]
A0A150GR87_GONPE1.970e-7756.19Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A836C4K2_9CHLO4.910e-7756.89Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J9RAY4_9CHLO7.810e-7754.05Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A8J4AY36_9CHLO8.150e-7655.31Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
D8THU2_VOLCA3.950e-7453.10Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A835T427_CHLIN2.000e-7352.40Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A0A7S3PA49_9STRA4.990e-7353.18Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2N0B1_9STRA2.000e-7252.27Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig73contigF-serratus_M_contig73:431247..440292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score193.7
Seed ortholog evalue7.8e-47
Seed eggNOG ortholog3067.XP_002946130.1
Hectar predicted targeting categoryother localisation
EggNOG OGs28PI8@1,2QW6A@2759,34K15@3041,37M1W@33090
Ec32 ortholog descriptionglycine/D-amino acid oxidase-like protein
Ec32 orthologEc-22_001590.1
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons5
Model size834
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932218.7527497-UTR-F-serratus_M_contig73:431246..4313821622932218.7527497-UTR-F-serratus_M_contig73:431246..431382Fucus serratus maleUTRF-serratus_M_contig73 431247..431382 -
1690964204.0429134-UTR-F-serratus_M_contig73:431246..4313821690964204.0429134-UTR-F-serratus_M_contig73:431246..431382Fucus serratus maleUTRF-serratus_M_contig73 431247..431382 -
1622932218.868403-UTR-F-serratus_M_contig73:435867..4358711622932218.868403-UTR-F-serratus_M_contig73:435867..435871Fucus serratus maleUTRF-serratus_M_contig73 435868..435871 -
1690964204.1016266-UTR-F-serratus_M_contig73:435867..4358711690964204.1016266-UTR-F-serratus_M_contig73:435867..435871Fucus serratus maleUTRF-serratus_M_contig73 435868..435871 -
1622932218.8884642-UTR-F-serratus_M_contig73:440183..4402921622932218.8884642-UTR-F-serratus_M_contig73:440183..440292Fucus serratus maleUTRF-serratus_M_contig73 440184..440292 -
1690964204.1102169-UTR-F-serratus_M_contig73:440183..4402921690964204.1102169-UTR-F-serratus_M_contig73:440183..440292Fucus serratus maleUTRF-serratus_M_contig73 440184..440292 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932218.778883-CDS-F-serratus_M_contig73:431382..4315641622932218.778883-CDS-F-serratus_M_contig73:431382..431564Fucus serratus maleCDSF-serratus_M_contig73 431383..431564 -
1690964204.061379-CDS-F-serratus_M_contig73:431382..4315641690964204.061379-CDS-F-serratus_M_contig73:431382..431564Fucus serratus maleCDSF-serratus_M_contig73 431383..431564 -
1622932218.8003669-CDS-F-serratus_M_contig73:433224..4333751622932218.8003669-CDS-F-serratus_M_contig73:433224..433375Fucus serratus maleCDSF-serratus_M_contig73 433225..433375 -
1690964204.0751152-CDS-F-serratus_M_contig73:433224..4333751690964204.0751152-CDS-F-serratus_M_contig73:433224..433375Fucus serratus maleCDSF-serratus_M_contig73 433225..433375 -
1622932218.816418-CDS-F-serratus_M_contig73:433946..4341201622932218.816418-CDS-F-serratus_M_contig73:433946..434120Fucus serratus maleCDSF-serratus_M_contig73 433947..434120 -
1690964204.0845058-CDS-F-serratus_M_contig73:433946..4341201690964204.0845058-CDS-F-serratus_M_contig73:433946..434120Fucus serratus maleCDSF-serratus_M_contig73 433947..434120 -
1622932218.838536-CDS-F-serratus_M_contig73:435789..4358671622932218.838536-CDS-F-serratus_M_contig73:435789..435867Fucus serratus maleCDSF-serratus_M_contig73 435790..435867 -
1690964204.0934608-CDS-F-serratus_M_contig73:435789..4358671690964204.0934608-CDS-F-serratus_M_contig73:435789..435867Fucus serratus maleCDSF-serratus_M_contig73 435790..435867 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig73.18522.1prot_F-serratus_M_contig73.18522.1Fucus serratus malepolypeptideF-serratus_M_contig73 431383..435867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig73.18522.1

>prot_F-serratus_M_contig73.18522.1 ID=prot_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=polypeptide|length=195bp
MQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTS
TWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQF
APLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV
APQLQERLSSMSPETRFRAARALDAWEYGSGCDYRYQPPLPEQQ*
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mRNA from alignment at F-serratus_M_contig73:431247..440292-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig73.18522.1 ID=mRNA_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=mRNA|length=9046bp|location=Sequence derived from alignment at F-serratus_M_contig73:431247..440292- (Fucus serratus male)
AACTCGACGACCTGGAGTTCCAGAGAGTTCTGTACGGCTTCTTCCCGACC TACAAGCGTAGTCCCTTGCCGGCGGAATGGGACCGGGTCTGCCAGATCGG CGACGCGAGGTTCGTTCTGCGTCACGCATGTTTCCTCTATTTTCTACTTT TTTTTGTGTGTGTGCTTTTTTGTCGCTCTTACCTGTGGTAGATTTTTACG TTTTCGTTTGCTTTTTTTATTTTTATTTTTTATGCCGTATTGTTTTCGTG TGGCGCTTTTTTTTGTGCGTTTGTACGTATGCGTGCATGTTCGGTTTTGT GCTAGTTTTTGTATTTTGTCTCATCAAAAGTCTCAATATCTTGTGGCAGG AGGGTTGAAAAAGCCTCGCAGCTCGTAACGTGAAAAATGCCTCGCGCTGC GTGGAAACCCCGGAGACCCGCTCGGCAAATACGACCCATTCTGCCACTAC GGTTGATCGATTTCCATCGGAACCGAGAACGCATTATTTCAATTCGTTAG TTGCTTGAAGTAATCACTTATTTTTCTTCAAATTACAGTAATTAATCGCT CTTGACGTCAAAGAATATGGACAAAAGGGCGTTTGGCGAGAAAAAAAAAG CCCGAGAATAGGCATGTGGGCATGTGCGCGATCCGTGGATGTCTCTCAAG GATTTTTTTCCTCCTATATGCTGGTATATCTATACATACATCTCCATTCA CTCCGTTCCGTTTCAGTTATGTTCCGATTCCGTTTTGATTCCGATTTGTT CCGTTTGGTTACCGATTTGTTTCGTCTCGATTCCGGTTCTGTTCGTTTCC GGACGTTTCAACGCCGTTTCGATTCCGTTTCGGCTCCGGTTCGATTGCGT TCTGTTCCGTTCCATTTCCGTTATTCCATAGCGTTTTGTTTTCTGCTGCT GTTTGTGATCTCTTCCGTTCCGTTGAGATTCCGTTTCAGCACTCTTAATG CCCTTTCCGTTCTGATTGATTCATTTGACTCCTCACATCTAGTGTTTTGC CCTTGCAGCAGCTGAAGAAACTACGGTGACACAACAAGCCAGCCATAGAC TATGACCTATCAAATGTCAATCCCGCTCGTGGTTACGAAGAGGTACGAAG GTCAACGGGTCACACATCATGGTGACAACCTGCTACTCAGACCAACTGGG ATCCAAATCGCGACAAAATCCTTGCCAGATTCAACCCACCGAGAACATCG GAAACTTCCGGCGTCAAGACGATGCCTTTGGGTACGAACTACCTGGTACA ATTTTTCCTGTCTGGAGTGCTGCCAGTATTTCAGAATCTGAATTACATGC GCTAAAGAGGAGACTGTCGTCTGTGCTGCCCAGCCAATCACAAGGTCAGG GCGGGTATTATATTAAAAAAAGGCGCATGGAACGTGGAACTTTGAATCCC TCTATGATTGGCCAACGACAAAAAATAAATTTCCTGGAAAGAGGTTTGGC CGCCGCAGTTCCCTTTTTCTTTTTCCCTCCGTCGAAATATTTTTTTATCA TCTTGTTCCTTAAAATGATCGAAAAGCCCACATGGAACGGGCTGGTCGAG GGCAAACGTTCTCAGAAATTTCCAAAACGGCGGTATGAGGCGATAGAAAA ATTAGAACGCGCCTATATATTCTGCGTCGCTATGTGTCGGTGTGTCGATG TTCTCAAATCGTTGACAGTCCCGGGCTTTTCGCCTAAAACCAGGTTCGAC AGTTCCGCATTCCAGCTTTATTTTATTTTTTGGGGACACAGCGCATGGAA CAGGGAACGAGGAATTCGAAGTTCCACGTTCCATGTTCCGTGCGTCTTTT TTTATCCAATACCCGCCCTCATCGAAGGCGATTACGAGAAGTTTTCTAGC TCTTAGTATAGGAGGGTTACACGAATACAAGTAATGCGGCACTTTACAAG CAATGGTACCAACCAATCTCAAAATGGTTCATCAAAGCTCCTTACTCCAT GTCGAGAGCAACCTCGATCGACTCGGATTGTTGTTGCTTACCACGGCCAG CGTTCCCAGTAACAAAGCGGCAAATCATGTGGTCTAGTAGGTAACTAAAA AAAGGCGCATGGAACGTGGAACTTTGAATCCCTCTATGATTGGCCAACGA CAAAAAATAAATTTCCTGGAAAGAGGTTTGGCCGCCGCAGTTCCCTTTTT CTTTTTCCTCCGTCGAAATATTTTTTTATCATCTCGTTCCTTAAAATGAT CGAAAAGCCCACATGGAACGGGCTGGTCGAGGGCAAACGTTCTCAGAAAT TTCCAAAACGGCGGTATGAGGCGATAGAAAAATTAGAACGCGCCTATATA TTCTGCGTCGCTATGTGTCGGTGTGTCGATGTTCTCAAATCGTTGACAGT CCCGGGCTTTTCGCCTAAAACCAGGTTCGACAGTTCCGCATTCCAGCTTT ATTTTATTTTTTGGGGACACAGCGCATGGAACAGGGATCGAAGTTCCACG TTACATGTTCCATGCGCCTTTTTTAATCTAGTACCCACCCTCACCGAAAG CGATTACAAGAAGTTTTCTAGCTCTTAGTATGGAGGGTTACACGAATACA AGTAATGCGGCACTTTACAAGCAATGGTACCAACCAATCTCAAAATGGTT CATCAAAGCTCCTTACTCCATGTCGAGAGCGACCTCGATCGACTCGGATT GTTGTTGCCTACCGCGGCCAGCGTTCCCAGCAACAAAGCGGCAAATCATG TGGTCTAGTAGGTAATCTGCATACCTGCTAGTGCGGAAGTCGTGAGCTCG ATTCTTAGCTTAAGCAGAATTTGTGTTCTTATTTTCGTAATGGAAAGCGT GGGAACGTTAGTAAGTAAAATTCAACCATCGGTTGACGAGTTGTAAGAGT GCTGAACTTACATCGCGATAAAAATTGCAAGGCGTGAACCGGGGAGAGAT GGGAAGATCCTTTGTGACCACAGGCAGGATGGTAATTAGAGGTCCATCGG CTATAAGTGTGATTAAAAAAACAAAAAACAAAAACCAGTTTCGATCAACA AACCCAAGTTTCTCAAGGCCACACGTGATACAGAAGTAAGGAGAATTTAA ATACGGAGTGGAGTTTCATGGTGGTGGAGGCCTTGAGCTGGTGAAGCCGG CACGCGAGCCAGCATCGAGCCGTCCAAATCCCTGTACATACTTGAAAAAG CCCCACGAATGTTGCCCGTTCGCCGCTCCTTGTAGGCCCTCGTAGGAAGA AAACAGAACGTTGTCAGATATCAACTTTTCTCTCAGAAACCTCCCAGTTC TCGCCTTTGATTCTCGCGTACATGGGTTCACCACTCCCCTGCCATGTCGA CGATCGAGCTGCCCTCCGTCCTCCACGCGATAGTACGCTACCAAGCTCTC CGCGACAGTAGTATTCCCTGCCTCTCGCGTGCCGCCACCTCCCCAAGGGC ACCAAATTGGAGCTCGAAAGAGGCGCGCACCTGGGAACACCATCCTCAAC CAGCAATACCGCTGCCGCGTCTCAACCGACCGACTGAATCGCGTAGACAG CCAGTTGGCTGCATCTCTCGAGGATGAGCCCGGCCCTACACCCACCAGGA AGACCCTCCCACACTCCTACCCCGAAACCAGTCTTCCATTCTTTAACGTT TCCGTTCTTTTTTCCGCTGTGAAACCTTTCCGTTCTTTTCAGTCGTGAAA CCTTAACCTTTCCGATCTTTTCCGTGGTAAAACCTTTCCGTTCTTGTCCG TTGTGAAACCTTTCCGTTATTTTCCGTTCTGTAATATTTCTGTTCTTTCC CGTGGTGTAACCTTTCCGTTCTTTTCCGTTTTGTAGCCTTTCCGAGTTCT CATCCGTTCTGCAACCTTTCCGTTCTTTCCAGCCGTTCTGTAACCTTTCC GTTCTTTACCGTTTTCCGTTTTGTAACCTTTCCATTATTTTCCGTTCTGT AATATTTGTGTTCTTTCCCGTGGTGTAACCTTTCCGTTCTTTTCCGTTTT GTAGCCTTTCCGTGTTCTCATCCGTTCTGCAACCTTTCCGTTCTTTCCAG CCGTTCTGTAACCTTTCCGTTCTTTACCGTTTTCCGTTTTGTAACCTTTC CATTATTTTCCGTTCTGTAATATTTCTGTCCTTTTCCGTGATGTAACCTT TCCGTTCTTTTCCGTTCTGTAGCCTTTCCGTGTTCTCATCCCTTCTGCAA CCTTTCCGTTCTTTTCAGCCGTTCTGTAACCTTTCCCTTTCCGTTCTTTA CCGTTTTCCGTTCTTTGCCGTTTTCCGTTTTGTGACCTTTCCGTTTTCGT TCCGTTCCGTTCCGCTTTCCTTCTACTCTCTTACCTGTGTTTTGTTCTGT TCCATTCCGTTCCGTTCCGTTCTATCCATCTCATTCCACGCCCCGCCGTT CCATTTACGTTCCTACTATTGCGTTTCATTCCGTTGCCCTTCTTCTGCTG TGACGACGACGACGGCGACAGTGGCATGCAGAGCCCTCTTTCGTTCGGGG GATTCGCCTGCCTCACGAGGCACGTGAAGCGCATCTCAAAGGCGCTGTCC GAGGTGAGACTTACGGTAATCAATCAATAATGCAAACGCCCCCCCCCCTC TCCCCCCCCTCCCCCAACCTCAAGGGAAAAGTGATCCAACTTCTATTATA TGTAATAATGTCAATTCTCAAATGCGACACGAAAAAACTCAGCGTGCGAT CAATAGCGGTACGGCCCTGTATTGTGGCACAGAATACAGAGACCCCCAGG TACCCGTAATTTGATTGGTCAGAGGTTCAAATAACTCTGTGGTAAGTGAC GGCTTTGATTGCATCTTGTCCAGCATAAGACACCTTACCTGCTTAGACAT AGCTGAGGTCAGTTCGAGCAATGGGGTTCTGGAGTATATATATATATATA TATGTATGTATTTAGGCACTATGGACTATAGAGAACAGGGTCGGGTCCAC CCGTCCTAATCCCCCCCCCCCCCTTAAAATGACACATCAAAAATAATCGG CGAGCAAAAACAGAAAAACGGTCCCCAAAAAACTAGCGCCCCGGTGAAAA CTTGTTTTTTCTATTGCAGTCGGTCAAAGTTTAAATACAATCTACTCCTT TTTTTGTCTCTTGTGCGTCGTCTCGTGATACAATGATCGTGTCCCCGGGT TTACGTATGTACTGGTACCTTGTTTCGTGTATGCAGAGGGGGAGGCATTC GCATCATCCCCTCCCGAAGGATAACGTTTCGCCAGTTCTCTGTGGCAACT AACGCCTCTGCACTGTGATGAATGGGCGAGAGAACGTCCCTCTCCCTTAC GTTTTAGCTCCTCCCCCCCTTCTTCCCCCCCACCGGGGATGTACAACAGC TTTCCCCTATATTTCAATACCTTTTTCCACTTCATACCAATAATAATGGG TGTGGGAAAAAAGAGGTGCACACCAATTGGTCTATGGTGATGCAAAGGCA GCACCCGTTACTGGAATTACCTTGAGGACTACCGCCGCCCCTGTGCCAGC GGACTCTCGGTAGTGAATGTCATCGGTACGTAATTACGCGACCCGATAAA CTCGGGACGGACCCGATGGCGTATGGCGGTTAAAATAAATAAATGGACGC CGCCGCGGAGATCGGCAGGAATCCCGTGAGTAAGCACCATATTCAGCCTG AGTGTGGAGAATGAGTAGGCTGACGCGGGACGGGACGGGACGGCCGAGCC CGTCTCGCGAGAGACCAAATTCTTAGGCGTGAACGGGACCAGGGAAATGT TCATTTTCCCCTGTTTAGCTGACCACGAGCAGGATTGTCAACCTTTTACC CGGTTGATCCATACTCTGCTATAACATGTGATTTTTATATAAACACGTAT ACATACATACCTTTTCTCCGCAGCAGCGACATGATACTATTAATAGTACG TGCTCCTCTTGCAAACCTGCTATTATAGTGTTTGCCATTAACAGAGGGAC ATAACCCGTGTCCTCGGCAGCGTAGTACCCTTATTATTTAGTAAATTGAG GTACAGTGGTAGGGAAGGGAAATATGCAGTCCATTTCCCGGGAGGAGTCG GTAGAGGGGAAAAGAGGATGTATGCCTTGTATGTTTTGTTTTTTTCTTCT CTTTGTTCACTCGATTGTCAAGTTGTTTTTGTTTTCGTTGGTGTTTTTAT TTTTCTGTAGGTGCGTTTCAAGAACGCGTGGCCTTCCCCCATCTCTCTCG TGTCGAAACCCTATCCATCCAGGCGCTCGAGGCTGACCTCCTCGACAAAG AGTCGCTCGGCATGGTGAACGCTTACCAGCCGGCCTTGACCTCGACGTGG ATGTTCCAGAAGTCCATGAGCGTCGGCGTTGGAGAGACGGTGGACCCCAA CCTAATCGTTGATCTCCTGGCGAACAATTTTAAGTCGATGGACCAGGTGA GGTTGATCTCTCTTGCAGTGTTTCTCTTGAAATACATCGGTGGAGAGTGG GATCACTTGTCTGATTGATTCCCTGTTAGGTGCCGAGACAGGAGATTTCT GGTCCAGGTTGCCATAATTTTCGTGCTCATACATACCTTCGGTCAACGGG TCTAGGTTGGACATGTTGTCTGCCTTCGCTTGCTTCTTTTGTTGTTGTTG CCGGAATGTTCTTAGAAAATGTTTGGGAAAAATCTCCCACCTTCGGTTCC TTTTTTTCCGGAGCATGATGCCGAAGTAGCTCTTGGCGAGACAGCACCTC CCCTATTATGCCGATGCCGTACTGTTTGGCCAAGAGTTTTAATGTTGCGG CGTCCCTAAAAATTCCTCCGCCTCATCCCCCCCCGCCCCTACCTTTTTTT CTTGTACCGCGAGGTTACATGTGCCGGAAAGTACACACCCCCATGACCCC CCCCAAAAAAAAATATATACAATCAAGAAGACAAAATATAAATTAATAAT AAAAACCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCTTCGACTCGACCTC CGTGCGACGCTACACAGCTGGGAAACCCCGTCTTGAAGCCATTTCTGCAG GACGTGATCCAGTTCGCTCCCCTTGCGAGAGTTCTGGTCGGGGTCACCTT CGCCGCGCCGTTATCTATTCCGCCCTTGCTCCTGCACGTTGGGTTGCTGC CCCTGGCAGACTGGACAGGTAAGAAAGAGGAGTAATAGGAGAAATAGGGG AGTTCCTCTCTCGCGGGTTGACCGAAAAAACTGATGACGGTTGTATTGTA CTGGTATAATGTAACCAACCTGTTCGGCGACACACTACATCGCGTACTTC GTTTTCCGTGAGCACATAAACATGCACATGCCTGGTGGTTACTACTGTAA TATACCAGTATGGTTTAGTTTTGAATCGGCTGATGGCATCCAGTTCGCGC AAAAAATACGCCATGAATATAATTTTGGTACATACATAGTTGCATACATT TGTAGCATACCAGGTATAGTATAACATATAACATATACGAAGTATCTAAT AATAATATTGCATTGTGTAATAGGCATTTAACAGTAGGGAGATCGTAGAT ACCAACATTATGTCGTGTGAACTTTTACTATTAAAATATGTATTACTTTC GTAGTGTTTTACGCACTCGAAAGACAACTTTAAATATTATACAAGCAACG AAGACCCTTGAATAATAATAATTAAGATGTGTATTGTAGGCCATTGGCTT CAAGCACGCGAAACGTTTCCATGTTAAAAATATCATGCGCCGTCGAGGTG TCCCTCAAGGCGTACCTCAACGGGGGACGCGCATGAATCCCCCCTAGTGT GCATTTACGCTGCCATCGTTATACTCTACAATGTCATCACCCACGTAGGG TGATACATACCAAAGTCATCCATCAAGCCCACATATCTCAAGCATCCAGT CAACGTCAAACGTTCTTCTCGGTTCGACCTCCCCTTGTCGTCAATGTTTG TCGTGATAGACAATCTTAACATGCATTACCTCGCCGCGATTGAATTTTGT CAAATATAGTCCCGAGAAGTTGAAACTGCTGTGTTCTCCGAGGATATTAC GCTCTTAAACAACGTTTTTTTGTCTATGTTTCGTTTTCCCTGTTGGCAAT TCTAGCTGCTGTTTTCGTACGGATACGTATTACAACGTCATAATTTTGCG ATTTGTGTAACTACGGGACACACTCCTTTTGGGGTGAGAGGCACTATTTT TTTTTAAGGTGTTGTGTAACGCCAGTTTTTCGTGATCCGCCTGTTTCAAG CCATGCTATGGCGCGTGTATATAGAGGGGGGAGGGGGTTGTTTTGTTTTG TTTTTTGTGAAATTTTCCTTGCCAGCGCAACGCTACTTTTTTGGCGTGTG GTAAATGCCACTTTTGAAAGGGTCGCAACACCGTTATGTGCGGGTGCTGC ATCACATTTTTTTGCATACAGAAGGCCATTTTGCGTTTCGCAATTTACAG TTTTTTTTTCTTCTTTGTTTTACGATATTGTGACGTGAGTTTTGGATGTA GAATGTGTCGGAAAAGGTCGCATTTAAAAAAAACACATATTTATTTAAGG TCATCAATTTGTACAGCAGCGGTTCTGTTTTTACCCTAATAACAGATTTA ATGGTAACATAACATAGTCTGGACTACTTGTGCGCAAACAACGTTTTTAA AAAAAACAATGGAAATAATTACCTGGTAAATGTTGATATTGTTGCTCATG TACGAGTTGAGCTTTTTTTCCCATTGTTTTAGACACAACAGTATATATTT TTTACAACCATTAAAAATTATCTTGTAACAGGTACCTGGTATGCGTTTCC CTTTCCTCCCTCCCTCTTGCGTTCGCAGGGCACTTTTTGCGCATGGGGCT CTACACAGCCCTACACCGTGTCGTGGCCCCTCAACTACAAGAACGCCTCT CATCGATGTCACCGGAAACCCGTTTCCGCGCCGCTCGAGCCCTGGATGCC TGGGAGTACGGCAGCGGGTGCGACTACCGTTACCAGCCGCCGCTTCCGGA GCAGCAGTAACGCAGTAATGAGGGACTAAAGAGCTACACAGCGACTGCAG TTCTTGTTAGAGAGATTACCTTTTTTTTCCGCCCATTTTTTTTCGTTCTC ATAATTTTTCCCATCACTTTTTATTCGTCCTTTTGTTCAAAAATGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig73:431247..440292-

>mRNA_F-serratus_M_contig73.18522.1 ID=mRNA_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig73:431247..440292- (Fucus serratus male)
ATGCAGAGCCCTCTTTCGTTCGGGGGATTCGCCTGCCTCACGAGGCACGT
GAAGCGCATCTCAAAGGCGCTGTCCGAGATGCAGAGCCCTCTTTCGTTCG
GGGGATTCGCCTGCCTCACGAGGCACGTGAAGCGCATCTCAAAGGCGCTG
TCCGAGGCGCTCGAGGCTGACCTCCTCGACAAAGAGTCGCTCGGCATGGT
GAACGCTTACCAGCCGGCCTTGACCTCGACGTGGATGTTCCAGAAGTCCA
TGAGCGTCGGCGTTGGAGAGACGGTGGACCCCAACCTAATCGTTGATCTC
CTGGCGAACAATTTTAAGTCGATGGACCAGGCGCTCGAGGCTGACCTCCT
CGACAAAGAGTCGCTCGGCATGGTGAACGCTTACCAGCCGGCCTTGACCT
CGACGTGGATGTTCCAGAAGTCCATGAGCGTCGGCGTTGGAGAGACGGTG
GACCCCAACCTAATCGTTGATCTCCTGGCGAACAATTTTAAGTCGATGGA
CCAGCTGGGAAACCCCGTCTTGAAGCCATTTCTGCAGGACGTGATCCAGT
TCGCTCCCCTTGCGAGAGTTCTGGTCGGGGTCACCTTCGCCGCGCCGTTA
TCTATTCCGCCCTTGCTCCTGCACGTTGGGTTGCTGCCCCTGGCAGACTG
GACAGCTGGGAAACCCCGTCTTGAAGCCATTTCTGCAGGACGTGATCCAG
TTCGCTCCCCTTGCGAGAGTTCTGGTCGGGGTCACCTTCGCCGCGCCGTT
ATCTATTCCGCCCTTGCTCCTGCACGTTGGGTTGCTGCCCCTGGCAGACT
GGACAGGGCACTTTTTGCGCATGGGGCTCTACACAGCCCTACACCGTGTC
GTGGCCCCTCAACTACAAGAACGCCTCTCATCGATGTCACCGGAAACCCG
TTTCCGCGCCGCTCGAGCCCTGGATGCCTGGGAGTACGGCAGCGGGTGCG
ACTACCGTTACCAGCCGCCGCTTCCGGAGCAGCAGTAAGGCACTTTTTGC
GCATGGGGCTCTACACAGCCCTACACCGTGTCGTGGCCCCTCAACTACAA
GAACGCCTCTCATCGATGTCACCGGAAACCCGTTTCCGCGCCGCTCGAGC
CCTGGATGCCTGGGAGTACGGCAGCGGGTGCGACTACCGTTACCAGCCGC
CGCTTCCGGAGCAGCAGTAA
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