mRNA_F-serratus_M_contig73.18522.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 386 bits (992), Expect = 1.040e-127 Identity = 185/226 (81.86%), Postives = 206/226 (91.15%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPETRFRAARALDAWEYGSGCDYRYQPP 680
++DLEFQRVL+GFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRH+KRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE V NLIVDLLANNF+SMD+LGNPVLKPFLQDV+QF PLARVLVGVT APLSIPPLLLHVG++PLADW GHF MGLY+ALHR+ P L++RL MS E R+R++R LDAWEYGSG DYRY+ P
Sbjct: 436 IEDLEFQRVLFGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLIVDLLANNFRSMDKLGNPVLKPFLQDVVQFGPLARVLVGVTLDAPLSIPPLLLHVGIVPLADWIGHFFSMGLYSALHRLAGPWLRKRLPKMSKEDRYRSSRLLDAWEYGSGSDYRYEGP 661
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.970e-78 Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 3
Query: 108 SGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTG 518
SGMQSPLSFGGFACLTRHVKRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE VD NLIVDLLANNFKSMD+LGNPVLKPFLQDV+QF PLARVL GVT APLSIPPLLLHVG++PLADW G
Sbjct: 5 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 141
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A150GR87_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR87_GONPE) HSP 1 Score: 253 bits (645), Expect = 1.970e-77 Identity = 127/226 (56.19%), Postives = 163/226 (72.12%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQE---RLSSMSPETRFRAARALDAWEYGSGCDYR 668
L+D+ F+RVL+GFFPT+K +PL +DRV QIGDASG+QSPLSFGGF LTRH+ R++ AL+EALEAD +D+ SLG+V+AY P L+S+WM QK+MSV +G+T P LI +LA NFK+M++LG PV+KPFLQDVIQF P+ + + PLSIP L+ HVG PL +W GH +G YTALH A L+E R + +RF R LDAWEYGSG DY+
Sbjct: 289 LEDITFKRVLFGFFPTFKNTPLKPTFDRVIQIGDASGLQSPLSFGGFGALTRHLARLTDALTEALEADCVDRGSLGLVHAYNPGLSSSWMMQKAMSVRLGDTPSPQLINRMLAGNFKAMERLGEPVMKPFLQDVIQFGPMVQTMGAQMLTDPLSIPGLIAHVGPGPLLEWLGHMGALGSYTALHGAAQAAGLREAVARAPGIGARSRFALRRLLDAWEYGSGKDYK 514
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A836C4K2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4K2_9CHLO) HSP 1 Score: 255 bits (652), Expect = 4.910e-77 Identity = 128/225 (56.89%), Postives = 157/225 (69.78%), Query Frame = 3
Query: 6 DDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSP----ETRFRAARALDAWEYGSGCDYR 668
DD++F+RVL+GFFPT+K +PL +DRV QIGDASG+QSPLSFGGF LTRH+ R++KALSEALEADLLDK SLG V AY P L+S+WM Q++MSV G+ P+LI +LA NF+SM + G+PV+KPFLQDVIQF P+ L F P SIP L+ HVG PL +W GH +G YTALH + + SP RF R LDAWEYGSG DY+
Sbjct: 434 DDIDFKRVLFGFFPTFKNTPLQPAFDRVIQIGDASGLQSPLSFGGFGALTRHLARLNKALSEALEADLLDKASLGRVAAYNPGLSSSWMMQRAMSVRQGDAPTPDLINRMLAGNFRSMQRFGDPVMKPFLQDVIQFGPMMTTLTAQMFGDPASIPRLISHVGPGPLLEWVGHMASLGAYTALHSAATAAGARKQVAESPVLTARERFTLNRLLDAWEYGSGLDYK 658
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO) HSP 1 Score: 254 bits (648), Expect = 7.810e-77 Identity = 120/222 (54.05%), Postives = 154/222 (69.37%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPETRFRAARALDAWEYGSGCDYR 668
L+ LE R+L+GFFPTY++SPL W+RV Q+GDASG+QSPLSFGGF LTRH+ R+ A++EAL+A+ LDK+SL VNAY P L+ WM Q++MSV GE DPN I LLA NF +M + G+PVLKPFLQDV+Q+ PL LV + PL +P + HVG+LP+ DW HF +G YT LH P +Q S + RF+ R LDAW+YGSG D+R
Sbjct: 395 LEFLEVLRILFGFFPTYRQSPLQPRWNRVLQVGDASGIQSPLSFGGFGALTRHLGRLRSAITEALDAEALDKDSLAQVNAYNPGLSGAWMLQRAMSVRPGERPDPNFINSLLAKNFAAMQRFGDPVLKPFLQDVVQYGPLGLTLVSQMLSDPLFVPAIFRHVGVLPMLDWLKHFTALGAYTVLHTAGRPVVQSLAERSSGKQRFKLNRLLDAWKYGSGSDFR 616
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A8J4AY36_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AY36_9CHLO) HSP 1 Score: 251 bits (642), Expect = 8.150e-76 Identity = 125/226 (55.31%), Postives = 164/226 (72.57%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQERLSSMS---PETRFRAARALDAWEYGSGCDYR 668
L+D+ F+RVL+GFFPT+K +PL +DRV Q+GDASG+QSPLSFGGF LTRH+ R++ AL+EA+E D LD+ESL +V+AY P L+S+WM QK+MSV GE P+LI +LA NFK+M++LG+PV+KPFLQDVI+F P+ R + PLSIP L+ HVG +PL +W GH + YTAL+ V A L+ + +S S P RF R LDAWEYGSG DY+
Sbjct: 405 LEDITFKRVLFGFFPTFKDTPLRPTFDRVIQVGDASGLQSPLSFGGFGALTRHLARLTTALAEAVETDALDRESLALVHAYNPGLSSSWMMQKAMSVRKGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVIKFGPMMRTMTAQMLTDPLSIPGLISHVGPMPLLEWLGHMTNLAAYTALNGVASAVDLRNKAASASFLTPRERFALNRLLDAWEYGSGQDYK 630
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: D8THU2_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8THU2_VOLCA) HSP 1 Score: 243 bits (620), Expect = 3.950e-74 Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVA-PQLQERLSS---MSPETRFRAARALDAWEYGSGCDYR 668
L+D+ F+RVL+G FPT+K +PL +DRV QIGDASG+QSPLSFGGF LTRH+ R++ AL+EA+EAD LD+ SL +V +Y P L+S+WM QK+MSV GE P+LI +LA NFK+M++LG+PV+KPFLQDV+QF P+ R + P SIP L+ HVG PL +W H + YTALH + L+ +S ++P RF R LDAWEYGSG DY+
Sbjct: 250 LEDITFKRVLFGMFPTFKDTPLRPAYDRVIQIGDASGLQSPLSFGGFGALTRHLARLTAALTEAVEADALDRGSLSLVQSYNPGLSSSWMMQKAMSVRRGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVVQFGPMMRTMAAQILTDPASIPSLIRHVGPAPLLEWLSHMANLAAYTALHGAASMADLRTAVSGAAVLTPRERFALNRLLDAWEYGSGMDYK 475
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A835T427_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835T427_CHLIN) HSP 1 Score: 246 bits (628), Expect = 2.000e-73 Identity = 120/229 (52.40%), Postives = 161/229 (70.31%), Query Frame = 3
Query: 3 LDDLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVV-APQLQERLS------SMSPETRFRAARALDAWEYGSGCDYR 668
L+D++F+RVL+GFFPT+K +PL +DR+ QIGDASG+QSPLSFGGF LTRH+ R++ AL+EA+EAD LD+ +LG+++AY P L+S+WM QK+MSV G+ P LI +LA NF++M++LG+ +KPFLQDVIQF P+ + PLS+P L+ HVG PLA+W GH +G YTALH A L+ L+ + P RF R LDAWEYGSG DY+
Sbjct: 439 LEDIQFKRVLFGFFPTFKDTPLQPAFDRIIQIGDASGLQSPLSFGGFGALTRHLARLTNALTEAMEADALDRNALGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELISRMLAGNFRAMEKLGDATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLGHMANLGAYTALHGAAGAAGLRAALAPGGAAAGLPPRARFALGRLLDAWEYGSGKDYK 667
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A7S3PA49_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA49_9STRA) HSP 1 Score: 233 bits (594), Expect = 4.990e-73 Identity = 117/220 (53.18%), Postives = 153/220 (69.55%), Query Frame = 3
Query: 9 DLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSM-SPETRFRAARALDAWEYGSGCDY 665
DL+F+RVL+ FFPTY+ +PL + RV +GDASG+QSPLSFGGF LTRH++RIS A+ +AL DLL KE LG +NAY P L++TWMFQ+SMSV +G++VD + LLA NF+ MDQ G +KPFLQDV++F L L G A P +P ++ HVG+ LADW GH MGLYT L V+P + +SSM +P RF R ++AW++GSG DY
Sbjct: 17 DLDFKRVLFAFFPTYRDAPLKPAYSRVLAVGDASGIQSPLSFGGFGALTRHLERISGAVHDALADDLLHKEDLGKINAYTPNLSATWMFQRSMSVRMGQSVDSKFVNRLLATNFEQMDQAGLRTIKPFLQDVVRFDGLVSSLAGSFVADPTFMPQIIAHVGVPALADWLGHVSMMGLYTVLDAAVSPIAEPIVSSMKNPRQRFHWKRQMEAWKFGSGRDY 236
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Match: A0A7S2N0B1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0B1_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.000e-72 Identity = 115/220 (52.27%), Postives = 151/220 (68.64%), Query Frame = 3
Query: 9 DLEFQRVLYGFFPTYKRSPLPAEWDRVCQIGDASGMQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANNFKSMDQLGNPVLKPFLQDVIQFAPLARVLVGVTFAAPLSIPPLLLHVGLLPLADWTGHFLRMGLYTALHRVVAPQLQERLSSMSPE-TRFRAARALDAWEYGSGCDY 665
DL+ +RVL+ FFPTY+ SPL W RV +GDASG+QSPLSFGGF LTRH++R+S +SEALEAD L K+ L +NAY P L++ WMFQK+MSV +G+ VDP + LLA NF MD++G +KPFLQDVI+ L L A PL +P ++ HVG+ L DW GH MGLYTALH V P ++ + +M + RF+ R ++AW++GSGCDY
Sbjct: 19 DLDVKRVLFAFFPTYRDSPLKPMWSRVLAVGDASGIQSPLSFGGFGALTRHLERLSDGISEALEADCLHKDDLAEINAYTPNLSAAWMFQKAMSVRMGQNVDPKFVNRLLATNFDLMDKMGIDTIKPFLQDVIRIDGLFGSLSRAFVADPLFMPQIVSHVGIPALVDWMGHVGMMGLYTALHSGVTPVIKPFVKNMKNDRARFQWNRRMEAWKFGSGCDY 238 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig73.18522.1 >prot_F-serratus_M_contig73.18522.1 ID=prot_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=polypeptide|length=195bp MQSPLSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSback to top mRNA from alignment at F-serratus_M_contig73:431247..440292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig73.18522.1 ID=mRNA_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=mRNA|length=9046bp|location=Sequence derived from alignment at F-serratus_M_contig73:431247..440292- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig73:431247..440292- >mRNA_F-serratus_M_contig73.18522.1 ID=mRNA_F-serratus_M_contig73.18522.1|Name=mRNA_F-serratus_M_contig73.18522.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig73:431247..440292- (Fucus serratus male)back to top |