mRNA_F-serratus_M_contig7272.18504.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: D8LCF8_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF8_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 1.700e-148 Identity = 222/305 (72.79%), Postives = 258/305 (84.59%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQGQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPEVTRFVRLPPNYDKLTMDGIAGLTAI-SC 912
MARKDMH D+ DT KIAG+Y+TA E WR+RER+T+ IQR+WRGFSAR++VW REEK KEMEE AE E + + ++RE+QRRMNP+T QDFE+LY+ELDQWREAETK IK AE G+ RKLAL+ELLHKETRLLQTIDRLK+ AAH GKERRTRRMLELMS K+WEMGDGE++ IHTPWT RA++LQ ++YEALE PLL VEERL+VLLHLKWTV EFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQ+IRNL+L F ETPDFNPE +RF+R+PP Y KLT +G+ GLT + SC
Sbjct: 92 MARKDMHLDDGCDTFKIAGEYRTAGEYWRVRERKTVTIQRFWRGFSARSRVWCRREEKWALEEKEMEEVAEEEGKRTQEKQREMQRRMNPSTVQDFEVLYNELDQWREAETKSIKQAEVGERRKLALRELLHKETRLLQTIDRLKITAAHEGKERRTRRMLELMSASKQWEMGDGEVSEIHTPWTNRARDLQ----DMYEALEAPLLSVEERLDVLLHLKWTVSEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFAETPDFNPEASRFIRVPPKYGKLTDEGMVGLTGVVSC 392
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A7S3XKM5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM5_HETAK) HSP 1 Score: 254 bits (650), Expect = 5.830e-81 Identity = 129/207 (62.32%), Postives = 166/207 (80.19%), Query Frame = 1
Query: 241 KREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQGQS-RKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPEVTRFVRLPP 858
+REV+RRM+P +A DFE+LY+EL++WR AE KR++ A G + R+ A Q LLHKETRLLQTIDRLK AA G+ R +RML+L++MPKKWE+ DGE+ +HTP+T RA EL+ ELY L PLLGV+ERL+VLLH+KWTV+EFDC LTRDI ELVDREADLL+RGRGE +L LR+++ NL+L F+ETP+FNPE RF+++PP
Sbjct: 4 RREVRRRMDPRSAADFEVLYNELERWRAAEAKRVRAAGLGPADRQRAHQALLHKETRLLQTIDRLKAAAAKEGRAERVQRMLDLLAMPKKWELSDGEVTEVHTPFTTRAAELR----ELYRGLTAPLLGVDERLDVLLHVKWTVKEFDCPLTRDIVELVDREADLLNRGRGEKALEGLRRRVANLFLRFVETPEFNPEAARFLKIPP 206
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: F0Y8I3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I3_AURAN) HSP 1 Score: 252 bits (644), Expect = 8.940e-79 Identity = 139/287 (48.43%), Postives = 196/287 (68.29%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKL---AEQGQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPEVTRFVRL 852
M R+D+ D+ D ++ + +Y TAA+L ++ ++T V+Q +WRG+ AR + W IR+ + E A E R +RR++ EV+RR+NP +A+DFE+LY+EL+ WR E +R++ A G K A+ ++L KET+ LQTIDRLK +AA GK RR R++ELM+ PKKWE GDGE+ +HTP+T RAQEL+ +LY L L +ERL +LL++KWTV+EF C LT DI EL DREADLL+RGR E SL LR++ L+ F+ETPDFNPE TRF+++
Sbjct: 74 MKREDLLMDDRGDVVRASRRYFTAAQLLELKRQKTQVLQCFWRGYLARRRTWGIRQRLYDAQVAEERGADEAGRAASRRRQFEVERRINPRSAKDFELLYNELEAWRAKEMERVRAIPDATPGDV-KAAMSDVLAKETKALQTIDRLKAQAAKEGKARRVERVMELMAFPKKWEAGDGELHEVHTPFTTRAQELR----DLYRGLATDRLPPDERLQILLNVKWTVQEFACPLTHDIVELCDREADLLNRGRNEKSLEGLRKRTETLFQQFIETPDFNPESTRFLKV 355
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A421EUQ5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EUQ5_9STRA) HSP 1 Score: 252 bits (643), Expect = 3.950e-77 Identity = 134/279 (48.03%), Postives = 192/279 (68.82%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQ--GQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPE 831
M R+D+ D + D A Y + +L +RE +++QR WRGF AR+ V+ I E++RR + EA E E RQ+REV RRM+P T DFE+LY+ELD+WR+ E ++++ + R+ AL +L KET+LLQTIDRLK+ A +++R ML+ M+ PK+W+M DG++ +HTP+T RA+EL +LY L +PL V+ERL++LLH+KWTV+EFDC LTR++ EL+DREAD+LSRGR E SL LR+++ NL+L F+ETP+FNPE
Sbjct: 194 MTRRDLKLDETYDRHVTARPYFDSYQLDSLREDSVLLMQRLWRGFRARSYVYNIGEQRRRMDMLAEVEAQENEAEDVSRQRREVNRRMHPNTVSDFEVLYNELDKWRQVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATDANRKQRIEAMLQFMARPKQWQMSDGDVKEVHTPFTVRAKELM----DLYHGLRMPLGSVDERLDMLLHIKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPE 468
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: W2QPI0_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QPI0_PHYPN) HSP 1 Score: 251 bits (640), Expect = 4.940e-76 Identity = 136/279 (48.75%), Postives = 191/279 (68.46%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQ--GQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPE 831
M+R+D+ D S D A Y + +L +RE +++QR+WRGF AR V+ IRE++RR EA E E RQ+REV RRM+P T DFEILY+EL++WR+ E ++++ + R+ AL +L KET+LLQTIDRLK+ A +++R ML+ M+ PK+W+M DG + +HTP+T RA+EL +LY L PL V+ERL++LLH+KWTV+EFDC LTR++ EL+DREAD+LSRGR E SL LR+++ NL+L F+ETP+FNPE
Sbjct: 253 MSRRDLKLDESFDRHVTARPYFDSYQLDSLREDSVLLMQRWWRGFRARLYVYSIREQRRRVTNLAEIEAHENEAEDVSRQRREVNRRMHPNTVSDFEILYNELEKWRQVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATEANRKQRIEAMLQFMARPKQWQMSDGGVKEVHTPFTVRAKELM----DLYHGLRTPLSSVDERLDMLLHVKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPE 527
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A6A3TZA4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TZA4_9STRA) HSP 1 Score: 251 bits (640), Expect = 4.940e-76 Identity = 137/279 (49.10%), Postives = 190/279 (68.10%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQ--GQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPE 831
M+R+D+ D S D A Y + +L +RE +++QR WRGF AR V+ IRE++RR EA E E RQ+REV RRM+P T DFE+LY+ELD+WR+ E ++++ + R+ AL +L KET+LLQTIDRLK+ A +++R ML+ M+ PK+W+M DG I +HTP+T RA+EL +LY L PL V+ERL++LLH+KWTV+EFDC LTR++ EL+DREAD+LSRGR E SL LR+++ NL+L F+ETP+FNPE
Sbjct: 253 MSRRDLQLDESFDRHVSARPYFDSYQLDSLREDSVLLMQRLWRGFRARLYVFNIREQRRRVSKLAEIEAQENETEDVNRQRREVNRRMHPNTVSDFEVLYNELDKWRQVECRKVREQRELDPSERQRALDAILSKETKLLQTIDRLKLTATDANRKQRIEAMLQFMARPKQWQMSDGGIKEVHTPFTVRAKELL----DLYHGLRTPLSSVDERLDMLLHIKWTVQEFDCALTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPE 527
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: H3GFT4_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GFT4_PHYRM) HSP 1 Score: 249 bits (637), Expect = 2.280e-75 Identity = 137/279 (49.10%), Postives = 189/279 (67.74%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQ--GQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPE 831
M+R+D+ D S D A Y + +L +RE +++QR WRGF AR V+ IRE++RR EA E E RQ+REV RRM+P T DFE+LY+ELD+WR E ++++ + R+ AL +L KET+LLQTIDRLK+ A +++R ML+ M PK+W+M DG+I +HTP+T RA+EL +LY L PL V+ERL++LLH+KWTV+EFDC LTR++ EL+DREAD+LSRGR E SL LR+++ NL+L F+ETP+FNPE
Sbjct: 274 MSRRDVKLDESFDRHVTARPYFDSYQLDSLREDSVLLMQRLWRGFRARLFVYNIREQRRRASKLAEIEAQENEADDISRQRREVNRRMHPNTVSDFEVLYNELDKWRLVECRKVREQRELDPSERQRALDAILAKETKLLQTIDRLKLTATEANRKQRIEAMLQFMGRPKQWQMSDGDIKEVHTPFTVRAKELM----DLYHGLRTPLSSVDERLDMLLHVKWTVQEFDCPLTRELVELIDREADMLSRGRKEKSLEGLRKRLTNLFLQFIETPEFNPE 548
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A7S2FH83_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FH83_9STRA) HSP 1 Score: 246 bits (629), Expect = 5.000e-75 Identity = 134/284 (47.18%), Postives = 193/284 (67.96%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAEQGQSR-KLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPEVTRFVR 849
M RKD++ D++ D +A Y +AA+L ++ +T+VIQ Y+RG+ AR + W +RE + + E E A + +R++ EV+RRMNP + DFE+LY+EL+ WR+ E I + K + +LL K+++ LQTIDRLK+ A+ G ++R RMLELMS PK WE+G+GE+ +HT TERAQEL ELY+ L L ++ERL+VLL+ KWT ++FDC LTRDI EL DREA++L+RGR EA+L LR+++ NL+L F+ETPDFNPE RF++
Sbjct: 185 MKRKDLYMDDAGDNEIVARPYFSAAQLHELKRDKTLVIQCYYRGYVARKRTWAMREALYLEHLAEREAAEKSAAANEKRRQYEVERRMNPKSLTDFELLYNELEAWRQKEMAAISALNLSDTEYKERMNDLLAKQSKALQTIDRLKVDASKHGHQQRVGRMLELMSKPKLWELGNGEVQEVHTASTERAQELM----ELYQGLNDTRLAIDERLDVLLNTKWTAKDFDCPLTRDIVELCDREAEMLNRGRSEATLGGLRKRLSNLFLQFVETPDFNPEAARFLK 464
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A061RZE0_9CHLO (Iq and ubiquitin-like domain-containing n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZE0_9CHLO) HSP 1 Score: 243 bits (621), Expect = 6.210e-75 Identity = 142/301 (47.18%), Postives = 201/301 (66.78%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREE--KRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAE-QGQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPEVTRFVRLPPNYD---KLTMDG 885
M R + D S D + + G Y TA EL RI++R+ ++IQ RG+ AR + ++ + +R +KE EEA E RR E++RRM+P TA DFEILY+EL+ WR ET +IK +E +++ AL++LL KET+LLQTIDRLK A K R + L+ MS PKKW++ +G + +HTP+T R++EL +LY L +P L V+ERL+VLLH+KWTV+EFDC LTR+I EL+DREADLL+RGR + LR++I +L+L F+ETP+FNPE RF +P ++D ++ MDG
Sbjct: 81 MRRPGVLLDESGDYILVPGPYMTAEELLRIKDRKAVIIQCALRGWLARRRANELKRQNIERESFLKEEEEARAEEESAKRRY--EIERRMHPRTAADFEILYNELEAWRLQETNKIKNSELDAETQHEALRQLLSKETKLLQTIDRLKSAANSENKALRIAKTLKDMSAPKKWDLSNGRMVQVHTPFTTRSKELA----QLYNGLNLPNLTVDERLDVLLHVKWTVKEFDCNLTREIVELIDREADLLNRGRSPTIMDGLRRRISSLFLAFIETPEFNPEAGRFQIVPLDFDGYQQVPMDG 375
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Match: A0A8K1CST2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CST2_PYTOL) HSP 1 Score: 245 bits (626), Expect = 3.750e-74 Identity = 131/279 (46.95%), Postives = 189/279 (67.74%), Query Frame = 1
Query: 1 MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKVWYIREEKRRQIIKEMEEAAELERCKARRQKREVQRRMNPTTAQDFEILYSELDQWREAETKRIKLAE--QGQSRKLALQELLHKETRLLQTIDRLKMKAAHGGKERRTRRMLELMSMPKKWEMGDGEIAAIHTPWTERAQELQARPPELYEALEVPLLGVEERLNVLLHLKWTVREFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQKIRNLYLLFLETPDFNPE 831
M R+D+ DN RD A Y + + ++E ++IQR WRG+ AR+ V + EK+R + +A + QKREVQRRM+P T DFE+LY+ELD+WR+ ET+++ +R+ AL+ +L KET+LLQTIDRLK+ A +++R ML+ M+ PK+W+M DG + +HTP+T RA+EL +LY L++ L+ V+ERL+VLLH KWTV+EF+C LTR+I EL+DREAD+L+RGR E SL LR+++ NL+L F+ETP+FNPE
Sbjct: 230 MERRDLRMDNGRDRTVTAKPYFDSYQFHCLKEDSVLLIQRLWRGYKARSYVHNLCVEKQRMATQHRLDAEHMSFSDVEHQKREVQRRMHPKTVSDFEVLYNELDKWRQIETRKLNEDRTLDDLARQDALEAILAKETKLLQTIDRLKLTATDANRKQRIESMLQFMARPKQWQMSDGGVREVHTPFTIRAKELA----DLYHGLKMSLISVDERLDVLLHAKWTVKEFECPLTREIIELIDREADMLNRGRKEKSLEGLRKRLNNLFLQFIETPEFNPE 504 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7272.18504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7272.18504.1 >prot_F-serratus_M_contig7272.18504.1 ID=prot_F-serratus_M_contig7272.18504.1|Name=mRNA_F-serratus_M_contig7272.18504.1|organism=Fucus serratus male|type=polypeptide|length=305bp MARKDMHFDNSRDTLKIAGKYQTAAELWRIRERQTIVIQRYWRGFSARNKback to top mRNA from alignment at F-serratus_M_contig7272:17330..19205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7272.18504.1 ID=mRNA_F-serratus_M_contig7272.18504.1|Name=mRNA_F-serratus_M_contig7272.18504.1|organism=Fucus serratus male|type=mRNA|length=1876bp|location=Sequence derived from alignment at F-serratus_M_contig7272:17330..19205- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7272:17330..19205- >mRNA_F-serratus_M_contig7272.18504.1 ID=mRNA_F-serratus_M_contig7272.18504.1|Name=mRNA_F-serratus_M_contig7272.18504.1|organism=Fucus serratus male|type=CDS|length=1830bp|location=Sequence derived from alignment at F-serratus_M_contig7272:17330..19205- (Fucus serratus male)back to top |