mRNA_F-serratus_M_contig7249.18485.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 184 bits (468), Expect = 8.420e-54 Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLK--VNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYPSGHATQNGAFATVLK + +DRGGDCYP+PV+PDDDGL+L+D+ GSCLT+EGEINKLAVNVAFGRQM+GIHYRFDG QGL+LGETITVRTL
Sbjct: 407 GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTL 506
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 184 bits (467), Expect = 6.470e-53 Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLK--VNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYPSGHATQNGAFATVLK + +DRGG+C+PNPVFP DDGLEL+++EG+CLTYEGEINKLAVNVAFGRQM+GIHYRFDG QGL+LGETITVRTL
Sbjct: 526 GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGECFPNPVFPSDDGLELINFEGACLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTL 625
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.200e-39 Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLK--VNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYP+GHATQNGAFATVLK V ++RG DC+ +P PDD+GL L+D+ G CLT+EGEINKLAVNVAFGR M G+H+R D QGL+LGE VR L
Sbjct: 465 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSDCFRDPKVPDDEGLTLLDFTGDCLTFEGEINKLAVNVAFGRNMCGVHWRIDSEQGLLLGEMAAVRIL 564
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.230e-37 Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLK--VNVDRGGDCYPNPVFPDDDGLELVDYEG----SCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYP+GHATQNGAFATVLK V ++RG C+ +PVFPDD+GL L+ Y G +CLT+EGEINKLAVNVA GR M+G+H+R D GL+LGET VR L
Sbjct: 472 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPVFPDDEGLTLLPYTGDDGNNCLTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRIL 575
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 134 bits (338), Expect = 8.760e-35 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLK--VNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYPSGHA QNGAF+T+LK V ++RG +C+ +PV P DDGL L+ ++G CLT+EGEINK A NVA GR MG+H+R D +GL+LGET+ VR L
Sbjct: 454 GSPTHPSYPSGHAVQNGAFSTILKALVGLERGLECFNDPVVPSDDGLTLLPFDG-CLTFEGEINKYAANVALGRNWMGVHWRMDAQEGLLLGETVAVRIL 552
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: A0A4Y7RBA7_9FIRM (PAP2 superfamily protein n=2 Tax=Pelotomaculum TaxID=191373 RepID=A0A4Y7RBA7_9FIRM) HSP 1 Score: 107 bits (268), Expect = 3.140e-25 Identity = 55/98 (56.12%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
G PTHP+YPSGHAT GA T+LK PNPV DGL L+ YEG LT GE+NKLAVN+A GR GIH+R DG++GL LGET+ +R L
Sbjct: 465 GCPTHPAYPSGHATYIGAGVTMLKAFFKESF-VLPNPVVAGPDGLSLLPYEGPPLTVGGELNKLAVNIAMGRDFAGIHWRTDGSEGLKLGETVAIRIL 561
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: S4XN83_SORCE (Uncharacterized protein n=4 Tax=Sorangium cellulosum TaxID=56 RepID=S4XN83_SORCE) HSP 1 Score: 106 bits (264), Expect = 9.360e-25 Identity = 54/98 (55.10%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
G PTHPSYP+ HATQ GA TVLK + PNPV DDGL LV Y G LT GE+NKLA N+A GR G+HYR DG G++LGE I + L
Sbjct: 404 GCPTHPSYPAAHATQAGACVTVLKAFFNESF-VIPNPVVASDDGLSLVPYTGPALTVGGELNKLATNIAHGRDGGGVHYRSDGVAGMLLGEAIALSIL 500
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: A0A7Y4U9Q7_9BACT (Vanadium-dependent haloperoxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4U9Q7_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 4.730e-24 Identity = 52/98 (53.06%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTH SY SGHAT GA TVLK D D NPV P+ DG LV Y G LT GE+NK+A+NVAFGR G+H+R D G+ LGE + + L
Sbjct: 33 GSPTHSSYGSGHATVAGACVTVLKAFFDEN-DIVKNPVVPNADGTALVPYVGEPLTVLGELNKVAINVAFGRNGAGVHWRTDALNGMQLGEDVVIGIL 129
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: A0A5C7QWN2_9GAMM (Phosphatase PAP2 family protein (Fragment) n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A5C7QWN2_9GAMM) HSP 1 Score: 101 bits (252), Expect = 6.830e-24 Identity = 53/98 (54.08%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHPSYPSGHAT GA ATVLK + N V DDGL L+ Y + LT GEINKLA N+A GR G+HYR D QGL++GE + + L
Sbjct: 195 GSPTHPSYPSGHATIAGACATVLKAFFNESF-VLNNSVIASDDGLSLLPYNSNALTVGGEINKLAGNIALGRDYAGVHYRQDAIQGLLVGEKVALNLL 291
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Match: A0A1G8UTV2_9BACI (Uncharacterized protein n=1 Tax=Salimicrobium halophilum TaxID=86666 RepID=A0A1G8UTV2_9BACI) HSP 1 Score: 102 bits (254), Expect = 2.080e-23 Identity = 52/98 (53.06%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYEGSCLTYEGEINKLAVNVAFGRQMMGIHYRFDGTQGLILGETITVRTL 294
GSPTHP+YP+GHAT GA T+LK D P+PV DG LV YEG LT GE+NKLA N+A GR G+HYR DG GL LGE + + L
Sbjct: 384 GSPTHPAYPAGHATFIGAMVTMLKAFFDESF-VIPDPVLASSDGRSLVRYEGPDLTVGGELNKLAANIAIGRDAAGVHYRSDGINGLKLGEQVAIGIL 480 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7249.18485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7249.18485.1 >prot_F-serratus_M_contig7249.18485.1 ID=prot_F-serratus_M_contig7249.18485.1|Name=mRNA_F-serratus_M_contig7249.18485.1|organism=Fucus serratus male|type=polypeptide|length=98bp GSPTHPSYPSGHATQNGAFATVLKVNVDRGGDCYPNPVFPDDDGLELVDYback to top mRNA from alignment at F-serratus_M_contig7249:3627..5210- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7249.18485.1 ID=mRNA_F-serratus_M_contig7249.18485.1|Name=mRNA_F-serratus_M_contig7249.18485.1|organism=Fucus serratus male|type=mRNA|length=1584bp|location=Sequence derived from alignment at F-serratus_M_contig7249:3627..5210- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7249:3627..5210- >mRNA_F-serratus_M_contig7249.18485.1 ID=mRNA_F-serratus_M_contig7249.18485.1|Name=mRNA_F-serratus_M_contig7249.18485.1|organism=Fucus serratus male|type=CDS|length=588bp|location=Sequence derived from alignment at F-serratus_M_contig7249:3627..5210- (Fucus serratus male)back to top |