mRNA_F-serratus_M_contig721.18461.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Match: D8LJ23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ23_ECTSI) HSP 1 Score: 846 bits (2186), Expect = 2.830e-266 Identity = 853/1922 (44.38%), Postives = 989/1922 (51.46%), Query Frame = 1
Query: 694 LALSAQDQDESDPEDFPPGAPEIRYADFIKLDIGMPARRPPDNVLRTVEELDRELGLGAELRRHAHLLGSRLKRVVCTRPDFITQVVAGGDPEHVGRKSVERSAKWL--TPRLRWLARALRDSVAERVWAAPTNGSG---------------GEGAVEAMRLLLDDLAHSYQGRRESARRALQSVLAPPPEGHRGSSGGIARARRVAWTPEKRRQPSLEHTPEIEEGEERVVVLQQEADEEQCGWLFWCRDIPAWENVAPLVVRSVRESIFYETSADPIRFSLLGLDLITRQPLRQTTPSSSPSDETAASGTSAGREKEVEEGGTRQHAATVARR----QDRWFFTLLLCKLLSGRRMVASNTLQRYPETFDLAASAVNAALRGATVDGVDLFAEGSVWPPRPRTRFPSLDASTGRVKTVLLPPLLLETAIALLSFHRADAGLTQELKARERAFIRPEEKNFALTELQELVFPTEQPTAPPEASRETGARGXXXXXXXSG---------VVGAGAAKMEASAKDAVGVKLWVRLAQAPSQQMSALAARHIPKMLLPRLLLASGLSRSCVRVTLSRLDSLGRAADNADELYQYLISPDAQGTWDMGNTMQSTKSLRDKLSRRVRAYLCTDDGDAKDDKDPKVKAKAKAPHARGPSGGDKKGDSEEG-------MFVAWLVEPPRQSGAGERGSGRAAXXXXXXXXXXXXXAQMFLLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDIPGTVSSXXXXXXXX---SPGKPSPSKGSRSXXXXXXXXXXXXXXXXEKDVRAEMSGGGPVGGVDGDHTLGV--------ERETGGSTAGGGGATSEKVGGVAMDALDGGAASRRRRGQGRVGHAQSPRKVRPRRRRQNAVIHKPGIIXXXXXXXXXXXXXXXXXKAGAALLDAKATSHGTVRPLENGSA---ESEGTSGGVSL-ARRYEEALRATERVEEVFRRAKGGGQEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGQGDGGLESGVDRGELVLATSGGGGGWQAGFALRRAQQAIVDFVLSDPEDETVWKGILHGIPL------STATPPSDHQHHRHQRMYTCTLYWRSVLLEGALRACTPDAAEKRLRSALRTSTSRGDHAGGRSGTEADMEVEEAGAVA--GTPVEKAQGE--AKSETAVLMLTGLCRLARDWRVFARGPVVGAVGSADSLEAWARPYFHQRDAEGSPRAALDPAGWGSRGDS------SPGSQRSWMAFSPAEVKELVKLVILGAGMKAKTKAEAESVSETEARVPVESAVDAGSERRESRRLQSKKHDTASEDLGDGSPDAAASAVGASDAATATATVNAACDRTGGNDSGA-----AVPVAWAWLLLTAC-SG--KRDNLAAAVEDLVAARGGPDLVEDEEDLEDXXXXXXXXXXXXXXXXXXXXXXVDV------SEXXXXXXXXXXXXXXXXXXXXIASSKPSDDXXXXAEDXADGGDNAEEIVGDXXXXXXXXVMEXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKEQVEVEDGGVKGEEPKVEGXXXXXXXXXXXXXXGARKHVDGGKVSERERRRAARAAAGYLLYQLYMTAPVEFEDCVGPEMHSRLLPVLADQFVVCAPPVPSEAG-RGHGLGVAMAAHALAGVGLIAGEKGTGRKRAAASAAVHSAVLADVARRMPLVFLEQLPVLTEVLMNDAEVERSAAAATISTRTDEPATV----------------VEEDHIGVAGGRPSGAGATVFRSRRIAPTRLCPVPALLRSAVVDTDGRPVGDRGDKILVHVRIWGQYFTEVAWRGVLGGLRAAPASIVGGAAGRAASVQRLLEAFLNIVAVQLMMDNGPELALVAVELLSLLETLGEMGASLLSAAPPVGGGPWS 6162
L+ + D +ESDPEDFPPGAPE RYADFIKLD+GMP R PP +VLR VE+LDRE+GLGAELRR CT PDFITQVVAG DPE VGR+SVERSA WL TPRLRWLARALRDSVAERVWA G G VEAM+LLL+DLAHSYQGRRESARRALQSVLA G R VAWTP + R+ E E GEERVVVLQ+EAD EQCGWLF C+ +PAW +VAPLVV +VR+S+FYETSADPIRFSLLGLDLITRQ V+RR QDRWFFT LLCKLLSGR+MVASNTLQRYPETFDLAASAVN ALRGATV+G++LFAEGSVWP +PRTRFP ++ASTG VKTVLLPPLLLETAIALLSFHRADA LT EL+ ELQEL+FP+E P A P +S XXXXXXX +VGAGAAKM+ +DAVGVKLWVRLAQAPSQQMSALAAR VRAYLC+ +G + G +G D +FVAWL + PRQ+G XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX S G+ SRS SGGG G G + + +RE S+A G ++ V G D G+ + + + ++G R+ + P + AK TV+ E +A + + +GG L A R EA RVE+VFRRAK E XXXXXXXXXXX + GV + A + RAQQAIVDF+LSDP+DE + +GIL +P+ S+A P ++ C+ YW ++LL+ A+ CTP AE+ L ALR+ AG D + G + G+ +GE + TA ++L GLCRLAR V R P VG VG ADSLEAWARPY+HQRDAEGSPRA L SPGS W AFS E++ LV+L+ L VP+ S A + +T + G +A R G +D VP WA LLL AC SG K LA AV+ L + XXXXX D SE XXXXXXXXXXXXXXXXXXX XXXX X XXXXXXXX XX XXXXXXXXXXXXXX VK EE + G VD G+ RERRR ARAAA YLLYQL M AP EF + VGPEM R+LP+LA+QFV+ P+PSEAG RG GL + AA+ALAG GLI GEKG GRKRAAASA H+AVLADVARRMPLVFLEQ+ LTE+L+NDAEVERSAAAA S+ E A + A +FRSRRIAP RLCP PALL S +VDTDGR VG +G +LVH+R+WGQYFTE W GVLG LRAAPA +VGGAAG+AA V +LLEA++N+VAVQLM+DNGPE+A +AV L LLE LGEMG ++L A P PW+
Sbjct: 202 LSKAKADDEESDPEDFPPGAPEGRYADFIKLDVGMPGRGPPQDVLRRVEKLDREMGLGAELRR-------------CTHPDFITQVVAGSDPERVGRESVERSAPWLKETPRLRWLARALRDSVAERVWAPXXXXXXXXXXXXXXXXXXXXXGSGGVEAMKLLLEDLAHSYQGRRESARRALQSVLAXXXXXXXXXXXGSGR---VAWTPVRGRRGG-----EGEGGEERVVVLQEEADREQCGWLFCCQSLPAWTHVAPLVVHAVRDSVFYETSADPIRFSLLGLDLITRQQAXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXVSRRGVAGQDRWFFTFLLCKLLSGRKMVASNTLQRYPETFDLAASAVNGALRGATVEGLNLFAEGSVWPDKPRTRFPCVEASTGEVKTVLLPPLLLETAIALLSFHRADANLTPELR-----------------ELQELMFPSEHPAATPLSSSXXXXXXXXXXXXXXXXXXXXXXXXLVGAGAAKMDGLVRDAVGVKLWVRLAQAPSQQMSALAAR-------------------------------------------------------------------------VRAYLCSHEGISD--------------QQGGGAGTDXXXXXXXXXXXXXXXLFVAWLADSPRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSGRSRSRSSSRSPMNVDEGVGGV----------GRRSGGGGTGARRGSLSDEIRRRVFEFLDREEAASSAADDGNKNDSVTGTGPKTGDSGSGNNKDEVEAKLGGESGRRRSAXXXXXXQRLPFSPRLSSNGSGNGGFESGPGPEPGD-----PAKPVPSATVKGEEEKAATAKKKKAVAGGRGLLAARCAEAAETVSRVEDVFRRAKAAALEALLRSSCPPGLSAATTXXXXXXXXXXXSHATARESEQKPSAKXXXSSSSRGVKESAKSTVS-------HAAYTPHRAQQAIVDFLLSDPDDEALLEGIL--LPVLFPSSSSSAAPGEGYRD-------ACSSYWHTLLLDAAIGTCTPATAERCLHLALRS-------AGNDEPVSDDGDGGSGGGLLRWGSWGADEEGEDLLVAPTAAVVLRGLCRLAR---VAIRAPQVGEVGGADSLEAWARPYYHQRDAEGSPRAGLGSXXXXXXXXXXXXNKWSPGSASLWTAFSSLEIRGLVRLIFLALPG-----------------VPLPSTATAAMRKXXXXXXXXXHGETGGK------------VPGGKEA------------REGSDDQXXXXXXXVVPREWAHLLLAACISGGVKSGGLAVAVDALTKIALREEXXXXXXXXXXXXXXXAGVRIKEEEDGALVPPTGDAKTGGPPSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVDKTAKDTEXXXXXXXXXXXXXXXXXXXXXCAAATVKTEEME-----------------GGTAVVDQGRDVARERRRVARAAAEYLLYQLCMAAPSEFAETVGPEMERRMLPMLAEQFVIRGAPIPSEAGSRGAGLRLVAAANALAGSGLIVGEKGAGRKRAAASAGGHAAVLADVARRMPLVFLEQVLALTELLLNDAEVERSAAAAEWSSFQAEEAGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLFRSRRIAPGRLCPAPALLGSTIVDTDGRAVGGKGAAVLVHIRLWGQYFTEAVWAGVLGALRAAPALLVGGAAGQAAGVPKLLEAYVNLVAVQLMVDNGPEVAQLAVNLRELLEGLGEMGVAVLEAPPXXXXXPWT 1894
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE) HSP 1 Score: 551 bits (1419), Expect = 2.250e-158 Identity = 440/924 (47.62%), Postives = 488/924 (52.81%), Query Frame = 1
Query: 1 PGSVGRQLWEASPTMRCLMQMLVCTDFRFPPPGGAVSLHGEGNNXXXXXXXXXXXRARLDSEDASGSCPDPSSITGPRRPGGTEGVSTEEAPSKSXXXXXXXXXXXXXXXXXRFSASSFFPIQGAGGGAHGPGGTATVDGGRGPXXXXXGAGLEGGEEMMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRAPE----------PVQVSKRGRRLVKTIKQVEQPESSEEEE---LALSAQDQDESDPEDFPPGAPEIRYADFIKLDIGMPARRPPDNVLRTVEELDRELGLGAELRRHAHLLGSRLKRVVCTRPDFITQVVAGGDPEHVGRKSVERSAKWL----------------------------------------------------------------------------------------------------------------------------------------TPRLRWLARALRDSVAERVWAAPTNGSGG---------------EGAVEAMRLLLDDLAHSYQGRRESARRALQSVLAPPPEGHRGSSGGIAR-ARRVAWTPEKRRQPSLEHTPEIEEGEERVVVLQQEADEEQCGWLFWCRDIPAWENVAPLVVRSVRESIFYETSADPIRFSLLGLDLITRQ--PLRQTTPSSSPSDETAASGTSAGREKEVEEGGTRQHAATVARRQDRWFFTLLLCKLLSGRRMVASNTLQRYPETFDLAASAVNAALRGATVDGVDLFAEGSVWPPRPRTRFPSLDASTGRVKTVLLPPLLLETAIALLSFHRADAGLTQELKARERAFIRPEEKNFALTELQELVFPTEQPTAPPEASRETGARGXXXXXXXSG--------VVGAGAAKMEASAKDAVGVKLWVRLAQAPSQQMSALAAR 2247
P SVG +LWE SPTMRCLMQMLVCTDFRFPPPGG+ SL+G+G N + C PR V+ P+ S FSAS+FFP+ DGG G G +GG+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PVQ+SKRGRRL KT+ L + D +ESDPEDFPPGAPE+RYADFIKLD+GMPARRPPD+VLR VEELDRE+GLGAELRR CT PDFITQVVAG DPE VGR+SVERSA WL TPRLRWLARALRDSVAERVWA G VEAM+LLL+DLAHSYQGRRESARRALQSVL + RVAWTP + R+ E E EERVVVLQ+EAD EQCGWLF C+ +PAW +VAPLVV +VR+S+FYETSADPIRFSLLGLD ITRQ P R+ A QDRWFFT LLCKLLSGR+MVASNTLQRYPETFDLAASAVN ALRGATV+G+DLFAEGSVWP +PRTRFP ++ASTG+VKTVLLPPLLLETAIALLSFHRADA LT EL+ ELQEL+FP+E P A P +S XXXXXXX +VGAGAAKM+ +DAVGVKLWVRLAQAPSQQMSALAAR
Sbjct: 1194 PASVGHELWETSPTMRCLMQMLVCTDFRFPPPGGSFSLNGDGGNSGTTATGTAATKGT--------ECGGGGGSVRPRLDSDGSVVALSAHPASSSQGGGSGDRFNNSEA---FSASAFFPVA--------------ADGGGGVEGPRVEVGRKGGDSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQMSKRGRRLTKTMXXXXXXXXXXXXXXXVLNKAKADDEESDPEDFPPGAPEVRYADFIKLDVGMPARRPPDDVLRRVEELDREMGLGAELRR-------------CTHPDFITQVVAGSDPERVGRESVERSAPWLVSAVASEPDALLRRLPLAVTVHLLLLACYQAYEEDHARRTKEVVSASTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAANEAAEAVGATRGTGWAGLFDGPPRSGGGDGSGGRASGLKKETPRLRWLARALRDSVAERVWAPXXXXXXXXXXXXXXXXXXXXXXNGGVEAMKLLLEDLAHSYQGRRESARRALQSVLXXXXXXXXXXXXXXXXXSGRVAWTPVRGRRGG-----EGEGAEERVVVLQEEADREQCGWLFCCQRLPAWTHVAPLVVHAVRDSVFYETSADPIRFSLLGLDRITRQQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRVAG-----QDRWFFTFLLCKLLSGRKMVASNTLQRYPETFDLAASAVNGALRGATVEGLDLFAEGSVWPDKPRTRFPCVEASTGQVKTVLLPPLLLETAIALLSFHRADANLTPELR-----------------ELQELMFPSEHPAATPLSSSXXXXXXXXXXXXXXXXXXXXXXXLVGAGAAKMDGLVRDAVGVKLWVRLAQAPSQQMSALAAR 2052
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Match: A0A6H5L4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X7_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 1.310e-115 Identity = 411/921 (44.63%), Postives = 486/921 (52.77%), Query Frame = 1
Query: 3700 QAGFALRRAQQAIVDFVLSDPEDETVWKGIL--------HGIPLSTATPPSDHQHHRHQRMYTCTLYWRSVLLEGALRACTPDAAEKRLRSALRTSTSRGDHAGGRSGTEADMEVEEAGAVAGTPVEKAQGEAKSETAVLMLTGLCRLARDWRVFARGPVVGAVGSADSLEAWARPYFHQRDAEGSPRAALDPA----GWGSRGDS--SPGSQRSWMAFSPAEVKELVKLVILGAGMKAKTKAEAESVSETEARVPVESAVDAGSERRESRRLQSKKHDTASEDLGDGSPDAAASAVGASDAATATATVNAACDRTGGNDSGAAVPVAWAWLLLTAC-SG--KRDNLAAAVEDL--VAARGGPDLVEDEEDLEDXXXXXXXXXXXXXXXXXXXXXXVDVSEXXXXXXXXXXXXXXXXXXXXIASSKPSDDXXXXAEDXADGGDNAEEIVGDXXXXXXXXVMEXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKEQVEVEDGGVKGEEPKVE----------------------------------GXXXXXXXXXXXXXXGARKHVDGGKVSERERRRAARAAAGYLLYQLYMTAPVEFEDCVGPEMHSRLLPVLADQFVVCAPPVPSEAG-RGHGLGVAMAAHALAGVGLIAGEKGTGRKRAAASAAVHSAVLADVARRMPLVFLEQLPVLTEVLMNDAEVERSAAAATISTRTDEPATV-------VEEDHIGVAGGRP----------------------SGAGATVFRSRRIAPTRLCPVPALLRSAVVDTDGRPVGDRGDKILV---HVRIWGQYFTEVAWRGVLGGLRAAPASIVGGAAGRAASVQRLLEAFLNIVAVQLMMDNGPELALVAVELLSLLETLGEMGASLLSAAPPVGGGPWSTARDMLFSIPSVIA 6204
QA RAQQAIVDF+LSDP+DE + +GIL + S+A P H+ C+ YW ++LL+ A+R CTP AE+ L ALR + + D G G + E+ + + TA ++L GLCRLARD RV P VG VG ADSLEAWARPY+HQR+A+GSPRA L + G G G + SPGS W AFS E++ LV+L+ V+ R+P TA+ L + S G + A V A D + A VP WA LLL AC SG K LA AV+ L +A R E+ XXXXXXXXXXXXXXXXXXXXXXV V E + PS+ XX X XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX G VD G RERRR ARAAA YLLYQL M AP +F VGPEM R+LP+LA+QFV+ P+PSEAG RG GL + AA+ALAG GLI GEKG GRKRAAASA H+AVLADVARRMPLVFLEQ+ LTE+L+NDAEVERSAAAA S E A + D G G + GA A +FRSRRIAP RLCP PALL S +VDTDGR VG +G +LV HVR+WGQYFTE W GVLG LRAAPA +VGGAAG+AA V +LLEA++N+VAVQLM+DNGPE+A +AV L LLE LGEMGA++L A PP GGGPW+T+R ML S+P +A
Sbjct: 424 QAAHTSHRAQQAIVDFLLSDPDDEALLEGILLPVLFPSSSSLSSSSAAPREGHRD-------ACSSYWHTLLLDAAIRKCTPATAERCLHLALRAAGN--DEPAGDDGXXXXXXXXFLRWGSCGADEEGEDLLVASTAAVVLRGLCRLARDPRVAIIAPQVGEVGGADSLEAWARPYYHQRNAKGSPRAGLSNSLAGGGGGLAGGNKGSPGSGSLWTAFSSLEIRGLVRLIF---------------VALPGVRLP----------------------STATAALRKKGAGGSGSGHGETGGRAAGGEVARASDVQQAAAASAVVPREWAHLLLAACISGGVKSGGLAVAVDALTKIALR---------EEXXXXXXXXXXXXXXXXXXXXXXXXXVRVKEEEDGALVPTPGDA-------MTGGPPSEGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETCAVATVKTEEMEGDTAVVDQGGGVARERRRVARAAAEYLLYQLCMAAPSDFAATVGPEMERRMLPMLAEQFVIRGAPIPSEAGSRGAGLRLVAAANALAGSGLIVGEKGAGRKRAAASAGAHAAVLADVARRMPLVFLEQVLALTELLLNDAEVERSAAAAEWSFFQAEEAGIGGGAGGTANNDGAGGGGXQXXXXXXXXXXXXXXXXXXXXXXXGGAAAPLFRSRRIAPGRLCPAPALLGSTIVDTDGRAVGGKGAAVLVSEVHVRLWGQYFTEAVWAGVLGALRAAPALLVGGAAGQAAGVPKLLEAYVNLVAVQLMVDNGPEVAQLAVNLRELLEGLGEMGAAVLEAPPPAGGGPWTTSRAMLVSVPPPVA 1282
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Match: A0A4D9DCY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCY3_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.540e-18 Identity = 158/669 (23.62%), Postives = 249/669 (37.22%), Query Frame = 1
Query: 775 FIKLDIGMPARRPPDNVLRTVEELDRELGLGAELRRHAHLLGSRLKRVVCTRPDFITQVVAGGDPEHVGRKSVERSAKWLTPR------------------------------------------------------------LRWLARALRDSVAERVWA---APTNGSGG-----------EGAVEAMRLLLDDLAHSYQGRRESARRALQSVLAPPPE-GHRGSSGGIARARRVAWTPEKRRQPSLEHTPEIEEGEERVVVLQQEADEEQCGWLFWCRDIPAWENVAPLVVRSVRESIFYETSADPIRFSLLGLDLITRQPLRQTTPSSSPSDETAASGTSAGREKEVEEGGTRQHAATVARRQDRWFFTLLLCKLLSGRRMVASNTLQRYPETFDLAASAVNAAL-RGATVDGVDLFAEGS------------------VWPPRPRTRFP-SLDASTGRVKTVLLPPLLLETAIALLSFHRADAGLTQELKARERAFIRPEEKNFALTELQELVFPTEQPTAPPEASRETGARGXXXXXXXSGVVGAGAAKMEASAKD-----AVGVKLWVRLAQAPSQQMSALAARHIPKMLLPRLLLASGLSRSCVRVTLSRLDSLGRAADNADELYQYLISPDAQGTWDMGNTMQSTKSLRDKLSRRVRAYL 2481
I LD+ MP R PP +V+ ++ L+ E G+GA LRR T PDF+ +AG V R+ + + +WL P L L +R + +R++ A G+G E A A+ + D+L RR +ARRAL +L PE R + G+ + AW + + G+ V A + C W+F +D+P + + + +R++ E++ E S I + LLGL P AASG + +G R + + + R FF+ + +L R++V ++ P + V A L A G L G VW R S D + + VLLP LL +L+S H+ + I P L +L L+FP+ + P+ R GA G + V AA ++ +D A+G + W+ L + S +SA AAR +P LP L+ SGLSR LSR++ L + A A+ +Y+ L+ ++ T ++ SL KL+RR AY+
Sbjct: 726 LIFLDLSMPPRTPPADVIERLKALNAEFGIGARLRR-------------ATEPDFVAAAIAGDGSRGVSRRMLVTTMEWLAPAVAAEPQVTLRRLPLECICHMYMIAHMKTSQKGHAQPRQHPLGKSGNERGEGTPASAVRGALHTLLDPMRRIILDRLFEECEATVAGTGERSSAVLSSEVEERASRALSVFTDELRAVETLRRAAARRALDELLVHSPERSKRVTEAGMVDVQGNAWA-------GTDLAARM--GDPAFVAR---ASQVHCAWMFHLQDLPCFRSKPAITLRALYEALQVEASHHVISYYLLGLLFHCHGPA-------------AASGDRFRIRRSKTKG--RGYKLSGSFRSPS-FFSFVASTVLISRKLVVQAAMEHTPFLCRVLVEEVTATLAESACAQGDSLGTPGEKCTTHDEETTTQSKHAKRVWQSCDLVRLCLSCDDLSSGPRNVLLPDTLLAACFSLMSMHKGSS-------------IPP-----VLEQLLGLLFPSA--VSAPDG-RLLGASG-------ASKVSDAAADVDGMERDEGERAALGPEEWIGLVKCGSHVISAAAARCMPHAFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLCSSSEATRQGSRSLNMQPSLLKKLARRTTAYI 1325
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Match: W7U910_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U910_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.810e-18 Identity = 160/669 (23.92%), Postives = 250/669 (37.37%), Query Frame = 1
Query: 775 FIKLDIGMPARRPPDNVLRTVEELDRELGLGAELRRHAHLLGSRLKRVVCTRPDFITQVVAGGDPEHVGRKSVERSAKWLTPR------------------------------------------------------------LRWLARALRDSVAERVW--AAPTNGSGGEG------------AVEAMRLLLDDLAHSYQGRRESARRALQSVLAPPPE-GHRGSSGGIARARRVAWTPEKRRQPSLEHTPEIEEGEERVVVLQQEADEEQCGWLFWCRDIPAWENVAPLVVRSVRESIFYETSADPIRFSLLGLDLITRQPLRQTTPSSSPSDETAASGTSAGREKEVEEGGTRQHAATVARRQDRWFFTLLLCKLLSGRRMVASNTLQRYPETFDLAASAVNAAL-RGATVDGVDLFAEGS------------------VWPPRPRTRFP-SLDASTGRVKTVLLPPLLLETAIALLSFHRADAGLTQELKARERAFIRPEEKNFALTELQELVFPTEQPTAPPEASRETGARGXXXXXXXSGVVGAGAAKMEASAKD-----AVGVKLWVRLAQAPSQQMSALAARHIPKMLLPRLLLASGLSRSCVRVTLSRLDSLGRAADNADELYQYLISPDAQGTWDMGNTMQSTKSLRDKLSRRVRAYL 2481
I LD+ MP R PP +V+ ++ L+ E G+GA LRR T PDF+ +AG V R+ + + +WL P L+ L +R + +R++ PT GE A +A+ + D+L RR +ARRAL +L PE R + G+ A+ AW + + GE V A + C W+F +D+P + + +R++ E++ E S I + LLGL P AASG + +G R + + + R FF+ + +L R++V ++ P + V A L + G L G VW R S D +G + VLLP LL +L+S H+ + I P L +L L+FP+ AP R GA G + V AA ++ +D A+G + W+ L + S +SA AAR +P + LP L+ SGLSR LSR++ L + A A+ +Y+ L+ ++ T ++ SL KL+R AY+
Sbjct: 109 LIFLDLSMPPRTPPADVIERLKALNAEFGIGARLRR-------------ATEPDFVAAAIAGDGSRGVSRRMLMTTMEWLAPAVAAEPQVTLRRLPLECICHMYMIAHMKTSQKGHAQPRQHPLGQSGNERGERTPASAVRGALQTLLGPMRRIILDRLFEECEPTVAGAGERSSAVLSSEVEERASKALSVFTDELRAVETLRRAAARRALDELLVHSPERSKRVAEAGMVDAQGDAW---------VGTDLAVRMGEPGFVAR---ASQVHCAWMFHLQDLPCFRSKPAATLRALYEALQVEASHHVISYYLLGLLFHCHGPA-------------AASGDRFRIRRSKTKG--RGYKLSGSFRSPS-FFSFVASTVLISRKLVVQAAMEHTPFLRRVLVEEVTATLAESSCAQGDSLATPGEKCTTHDEETTTQSKHAKRVWQSCDLARLCLSCDDLSGP-RNVLLPDTLLAACFSLMSMHKGSS-------------IPP-----VLEQLLGLLFPSAV-NAPD--GRLLGASG-------ASKVSDAAADVDGMERDEGERAALGPEEWIGLVKCESHVISAAAARCMPHVFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLWSSSEATRQGSRSLNMQPSLLRKLARHTTAYI 707 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig721.18461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig721.18461.1 >prot_F-serratus_M_contig721.18461.1 ID=prot_F-serratus_M_contig721.18461.1|Name=mRNA_F-serratus_M_contig721.18461.1|organism=Fucus serratus male|type=polypeptide|length=2064bp MRCLMQMLVCTDFRFPPPGGAVSLHGEGNNGNSNGGDGGGGRARLDSEDAback to top mRNA from alignment at F-serratus_M_contig721:347321..369664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig721.18461.1 ID=mRNA_F-serratus_M_contig721.18461.1|Name=mRNA_F-serratus_M_contig721.18461.1|organism=Fucus serratus male|type=mRNA|length=22344bp|location=Sequence derived from alignment at F-serratus_M_contig721:347321..369664+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig721:347321..369664+ >mRNA_F-serratus_M_contig721.18461.1 ID=mRNA_F-serratus_M_contig721.18461.1|Name=mRNA_F-serratus_M_contig721.18461.1|organism=Fucus serratus male|type=CDS|length=12384bp|location=Sequence derived from alignment at F-serratus_M_contig721:347321..369664+ (Fucus serratus male)back to top |