mRNA_F-serratus_M_contig720.18451.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig720.18451.1
Unique NamemRNA_F-serratus_M_contig720.18451.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.440e-59
Identity = 116/214 (54.21%), Postives = 150/214 (70.09%), Query Frame = 1 
Query:  202 LGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVL-MAEKKWEEACRMCEIWAYKR---DMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREGYIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            LGLS   A+R    + +K +ER     A + A+RAL+ +PNLE+AQ L+L  L    ++WEEA R CE+WA+KR   D   GR + L G+ EGGG P LC+  MH +++EGY K+LRNAG+TD F  AL  AT  G  WA +MTRRRQ+ M+KK+RA +AYAS  Y +A +LY+EAI VD +D  TNALL+ANRAAALMNL +NKDALKDC +A
Sbjct:    2 LGLS-FRALRVW--STRKEIER-----AIDCAERALALAPNLESAQKLILDALEQGRRQWEEAQRRCEVWAHKRANCDFESGRNN-LAGYAEGGGPPELCIAAMHASLQEGYCKALRNAGQTDKFKEALAAATGTGVPWAMSMTRRRQDVMDKKERAGKAYASNRYRLAHELYSEAICVDPQDYYTNALLFANRAAALMNLARNKDALKDCIEA 206
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A1V9ZSB0_9STRA (J domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSB0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.280e-11
Identity = 79/286 (27.62%), Postives = 127/286 (44.41%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRK-------DSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREGYIKSLRNAGRTDAFTAALDDA--TDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            ML +   A+ D   A+ AD  Y RA+   G+ YLL+G   +A + F  G+ K       D+D    + +D     G+ +V A  +    AK A +  D K A   A RAL+ +P         + +L+A +++ +A     +   K  + +       G   G    LL  + +H      Y   +   G  +     L+DA  T  G    K +    ++A   K   ++A++ G +  A   Y+  + +D      NA+LY NRAAALM LGK+  AL DC++A
Sbjct:  409 MLHKIRDALQDARAAVGADPSYLRAHVRCGRCYLLLGDFFEARNAF-VGIYKLLVPSATDTDVYRTQARD-----GVKDVEAFVSFANEAKWAHDVLDYKGALRAASRALTFAPYSRDLHLQKMTLLLALQQYGDA-----VAHMKEQLKLHATVAAHGIDVG----LLYARSLH------YADDV---GAAEEVLKELEDAAPTSKGVLKTKQLWSDMKQA---KAMGNDAFSCGNFQRAANFYSAGLSLDASHDSYNAVLYCNRAAALMGLGKHAQALADCQEA 667
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A261Y4L9_9FUNG (J domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y4L9_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 1.470e-9
Identity = 47/165 (28.48%), Postives = 79/165 (47.88%), Query Frame = 1 
Query:  361 MAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMH------DTIREGYIKSLRNAGRTDAFTAALDDAT--DMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            +A+  +E A  MC+         I +V  L G      +  L  ++M       D I     + L   G      A   +A   D  +  A+ + ++ +    KK+  +EA+ +G Y  A  LYTEA+ +D ++  TNA LY+NRA  L  LG++ +A++DC++A
Sbjct:  149 LAQNSFERAIGMCDADNVPLQWQISKVDCLLGQKNYSEAGRLANELMRTYPSDPDAIY-ARARVLYMQGENQKAVAHCQEALRCDPDYTKARTLLKQARSLEAKKNEGNEAFKAGRYTEAHALYTEALAIDPDNFGTNAKLYSNRATVLAKLGRDAEAIQDCDRA 312
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: UPI000B4EC9A8 (dnaJ homolog subfamily C member 7 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4EC9A8)

HSP 1 Score: 65.9 bits (159), Expect = 1.650e-8
Identity = 71/280 (25.36%), Postives = 119/280 (42.50%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREG---YIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLGR+  A+AD   ++  D  + R +   GK +L +G    A   F+  +  D        ++ + +    N +AV  + + A+   E+ D +      DRAL  +P     + L    L    ++ EA +       + D +      + G         LCL    D I +    ++++LR A   +    A  +A  +                 KK+  ++A+  G Y +A +LYTEA+G+D  +I TNA LY NR      L K +DA++DC  A
Sbjct:   74 MLGRFREALADAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDH-------KNTQAQQEFKNANAVLEYEKIAEVDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYSEA-QFVASDILRMDSTNADALYVRG---------LCLYY-EDCIEKAVQFFVQALRMAPDHEKACVACRNAKAL---------------KAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLEDAIEDCTNA 320
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A2G8K595_STIJA (Putative dnaJ-like subfamily C member 7 n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K595_STIJA)

HSP 1 Score: 65.1 bits (157), Expect = 2.620e-8
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 1 
Query:  643 EKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            +KKD+ ++A+  G Y  A  LYTEA+ +DE ++LTNA LY NRA     LGK +DA+ DC  A
Sbjct:  204 QKKDQGNDAFKKGRYQEACDLYTEALEIDEHNVLTNAKLYCNRANVRSKLGKLEDAISDCSSA 266
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A6P8NTU5_GEOSA (dnaJ homolog subfamily C member 7 n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8NTU5_GEOSA)

HSP 1 Score: 64.7 bits (156), Expect = 3.850e-8
Identity = 75/277 (27.08%), Postives = 114/277 (41.16%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREGYIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLG++  A+ D   A+  D  + R +   GK +L +G    A   F+    K  D E + +Q    R  L N  AV  + +  +   E+ D +      DRAL  +P     + L    L    ++ EA  +      + D +      + G         LCL    D I +              F  AL  A D     A+   R  +    KK+  ++A+  G Y +A  LY+EA+G+D  +I TNA LY NR      L K +DA+ DC +A
Sbjct:  101 MLGKFREALEDAQQAVRLDDSFVRGHLREGKCHLSLGNAMAACRCFQ----KVIDLEPENIQ---ARQELKNASAVLEYEKIGEADFEKRDFRKVVFCMDRALEFAPVCHRFRILKAECLALLGRYPEAQSVASD-ILRLDSTNADALYVRG---------LCLYY-EDCIEKAV----------QFFVQALRMAPD--HEKARLACRNAKALKAKKEEGNQAFKEGNYELAYDLYSEALGIDPNNIKTNAKLYCNRGTVNSKLRKPQDAIDDCTEA 347
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: B7Z9W6_HUMAN (cDNA, FLJ78980, highly similar to DnaJ homolog subfamily C member 7 n=5 Tax=Boreoeutheria TaxID=1437010 RepID=B7Z9W6_HUMAN)

HSP 1 Score: 64.3 bits (155), Expect = 4.650e-8
Identity = 70/280 (25.00%), Postives = 117/280 (41.79%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREG---YIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLGR+  A+ D   ++  D  + R +   GK +L +G    A   F+  +  D        ++ + +    N +AV  + + A+   E+ D +      DRAL  +P     + L    L    ++ EA  +      + D +      + G         LCL    D I +    ++++LR A   +    A  +A  +                 KK+  ++A+  G Y +A +LYTEA+G+D  +I TNA LY NR      L K  DA++DC  A
Sbjct:   18 MLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNATAACRSFQRALELDH-------KNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD-ILRMDSTNADALYVRG---------LCLYY-EDCIEKAVQFFVQALRMAPDHEKACIACRNAKAL---------------KAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNA 264
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A5E4ARE2_MARMO (Uncharacterized protein n=2 Tax=Rodentia TaxID=9989 RepID=A0A5E4ARE2_MARMO)

HSP 1 Score: 63.9 bits (154), Expect = 4.950e-8
Identity = 70/280 (25.00%), Postives = 117/280 (41.79%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREG---YIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLGR+  A+ D   ++  D  + R +   GK +L +G    A   F+  +  D        ++ + +    N +AV  + + A+   E+ D +      DRAL  +P     + L    L    ++ EA  +      + D +      + G         LCL    D I +    ++++LR A   +    A  +A  +                 KK+  ++A+  G Y +A +LYTEA+G+D  +I TNA LY NR      L K  DA++DC  A
Sbjct:   74 MLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDH-------KNAQAQQEFKNANAVMEYEKIAEMDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD-ILRMDSTNADALYVRG---------LCLYY-EDCIEKAVQFFVQALRMAPDHEKACIACRNAKAL---------------KAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTHA 320
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A6I8PU89_HUMAN (DnaJ homolog subfamily C member 7 n=12 Tax=Boreoeutheria TaxID=1437010 RepID=A0A6I8PU89_HUMAN)

HSP 1 Score: 63.9 bits (154), Expect = 4.950e-8
Identity = 70/280 (25.00%), Postives = 117/280 (41.79%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREG---YIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLGR+  A+ D   ++  D  + R +   GK +L +G    A   F+  +  D        ++ + +    N +AV  + + A+   E+ D +      DRAL  +P     + L    L    ++ EA  +      + D +      + G         LCL    D I +    ++++LR A   +    A  +A  +                 KK+  ++A+  G Y +A +LYTEA+G+D  +I TNA LY NR      L K  DA++DC  A
Sbjct:   74 MLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDH-------KNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD-ILRMDSTNADALYVRG---------LCLYY-EDCIEKAVQFFVQALRMAPDHEKACIACRNAKAL---------------KAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNA 320
[Close]
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Match: A0A6I8PLE7_HUMAN (DnaJ homolog subfamily C member 7 (Fragment) n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A6I8PLE7_HUMAN)

HSP 1 Score: 63.9 bits (154), Expect = 5.100e-8
Identity = 70/280 (25.00%), Postives = 117/280 (41.79%), Query Frame = 1 
Query:    1 MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGMRKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYADRALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHILEGFPEGGGSPLLCLQMMHDTIREG---YIKSLRNAGRTDAFTAALDDATDMGFAWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTNALLYANRAAALMNLGKNKDALKDCEQA 831
            MLGR+  A+ D   ++  D  + R +   GK +L +G    A   F+  +  D        ++ + +    N +AV  + + A+   E+ D +      DRAL  +P     + L    L    ++ EA  +      + D +      + G         LCL    D I +    ++++LR A   +    A  +A  +                 KK+  ++A+  G Y +A +LYTEA+G+D  +I TNA LY NR      L K  DA++DC  A
Sbjct:   35 MLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDH-------KNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD-ILRMDSTNADALYVRG---------LCLYY-EDCIEKAVQFFVQALRMAPDHEKACIACRNAKAL---------------KAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNA 281
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig720.18451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Y3_ECTSI1.440e-5954.21Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
A0A1V9ZSB0_9STRA9.280e-1127.62J domain-containing protein n=1 Tax=Achlya hypogyn... [more]
A0A261Y4L9_9FUNG1.470e-928.48J domain-containing protein n=1 Tax=Bifiguratus ad... [more]
UPI000B4EC9A81.650e-825.36dnaJ homolog subfamily C member 7 n=1 Tax=Meriones... [more]
A0A2G8K595_STIJA2.620e-849.21Putative dnaJ-like subfamily C member 7 n=2 Tax=St... [more]
A0A6P8NTU5_GEOSA3.850e-827.08dnaJ homolog subfamily C member 7 n=3 Tax=Gymnophi... [more]
B7Z9W6_HUMAN4.650e-825.00cDNA, FLJ78980, highly similar to DnaJ homolog sub... [more]
A0A5E4ARE2_MARMO4.950e-825.00Uncharacterized protein n=2 Tax=Rodentia TaxID=998... [more]
A0A6I8PU89_HUMAN4.950e-825.00DnaJ homolog subfamily C member 7 n=12 Tax=Boreoeu... [more]
A0A6I8PLE7_HUMAN5.100e-825.00DnaJ homolog subfamily C member 7 (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig720contigF-serratus_M_contig720:338018..346498 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score204.9
Seed ortholog evalue4.8e-50
Seed eggNOG ortholog2880.D7G5Y3
KEGG koko:K09523,ko:K09524,ko:K09527,ko:K09536
KEGG Pathwayko04141,ko05164,map04141,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.chaperone cofactor-dependent protein refolding
EggNOG OGsCOG0484@1,KOG0550@2759,KOG0713@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons7
Model size831
Cds size831
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932207.4253755-CDS-F-serratus_M_contig720:338017..3381941622932207.4253755-CDS-F-serratus_M_contig720:338017..338194Fucus serratus maleCDSF-serratus_M_contig720 338018..338194 -
1690964198.7181985-CDS-F-serratus_M_contig720:338017..3381941690964198.7181985-CDS-F-serratus_M_contig720:338017..338194Fucus serratus maleCDSF-serratus_M_contig720 338018..338194 -
1622932207.4394705-CDS-F-serratus_M_contig720:338697..3388121622932207.4394705-CDS-F-serratus_M_contig720:338697..338812Fucus serratus maleCDSF-serratus_M_contig720 338698..338812 -
1690964198.7313015-CDS-F-serratus_M_contig720:338697..3388121690964198.7313015-CDS-F-serratus_M_contig720:338697..338812Fucus serratus maleCDSF-serratus_M_contig720 338698..338812 -
1622932207.4629724-CDS-F-serratus_M_contig720:342255..3424461622932207.4629724-CDS-F-serratus_M_contig720:342255..342446Fucus serratus maleCDSF-serratus_M_contig720 342256..342446 -
1690964198.7439084-CDS-F-serratus_M_contig720:342255..3424461690964198.7439084-CDS-F-serratus_M_contig720:342255..342446Fucus serratus maleCDSF-serratus_M_contig720 342256..342446 -
1622932207.4830582-CDS-F-serratus_M_contig720:342825..3429071622932207.4830582-CDS-F-serratus_M_contig720:342825..342907Fucus serratus maleCDSF-serratus_M_contig720 342826..342907 -
1690964198.7545729-CDS-F-serratus_M_contig720:342825..3429071690964198.7545729-CDS-F-serratus_M_contig720:342825..342907Fucus serratus maleCDSF-serratus_M_contig720 342826..342907 -
1622932207.5127656-CDS-F-serratus_M_contig720:343457..3435671622932207.5127656-CDS-F-serratus_M_contig720:343457..343567Fucus serratus maleCDSF-serratus_M_contig720 343458..343567 -
1690964198.7643137-CDS-F-serratus_M_contig720:343457..3435671690964198.7643137-CDS-F-serratus_M_contig720:343457..343567Fucus serratus maleCDSF-serratus_M_contig720 343458..343567 -
1622932207.534301-CDS-F-serratus_M_contig720:345364..3454481622932207.534301-CDS-F-serratus_M_contig720:345364..345448Fucus serratus maleCDSF-serratus_M_contig720 345365..345448 -
1690964198.7750053-CDS-F-serratus_M_contig720:345364..3454481690964198.7750053-CDS-F-serratus_M_contig720:345364..345448Fucus serratus maleCDSF-serratus_M_contig720 345365..345448 -
1622932207.5629833-CDS-F-serratus_M_contig720:346426..3464981622932207.5629833-CDS-F-serratus_M_contig720:346426..346498Fucus serratus maleCDSF-serratus_M_contig720 346427..346498 -
1690964198.7860644-CDS-F-serratus_M_contig720:346426..3464981690964198.7860644-CDS-F-serratus_M_contig720:346426..346498Fucus serratus maleCDSF-serratus_M_contig720 346427..346498 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig720.18451.1prot_F-serratus_M_contig720.18451.1Fucus serratus malepolypeptideF-serratus_M_contig720 338018..346498 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig720.18451.1

>prot_F-serratus_M_contig720.18451.1 ID=prot_F-serratus_M_contig720.18451.1|Name=mRNA_F-serratus_M_contig720.18451.1|organism=Fucus serratus male|type=polypeptide|length=277bp
MLGRYVYAIADCGLALLADIGYDRAYPILGKAYLLVGKLEQAEDVFRAGM
RKDSDCEEDELQDEKCRLGLSNVHAVRAHLENAKKAVERDDKKSATEYAD
RALSDSPNLEAAQHLMLGVLMAEKKWEEACRMCEIWAYKRDMSIGRVHIL
EGFPEGGGSPLLCLQMMHDTIREGYIKSLRNAGRTDAFTAALDDATDMGF
AWAKNMTRRRQEAMEKKDRADEAYASGLYLVAQKLYTEAIGVDEEDILTN
ALLYANRAAALMNLGKNKDALKDCEQA
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mRNA from alignment at F-serratus_M_contig720:338018..346498-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig720.18451.1 ID=mRNA_F-serratus_M_contig720.18451.1|Name=mRNA_F-serratus_M_contig720.18451.1|organism=Fucus serratus male|type=mRNA|length=8481bp|location=Sequence derived from alignment at F-serratus_M_contig720:338018..346498- (Fucus serratus male)
ATGCTCGGCCGATATGTGTACGCGATCGCCGACTGCGGGTTGGCCCTTTT
GGCCGACATCGGCTACGACCGGGTGATGACGATGATACTCTCAGTTCGTG
CCTGTATTGAAGTTGTTATTGATTTCTAGAGTAATACTCCAGTATTAATA
TCAATAGTTGGATGGTCTGGGAGGTACACTCCAGAGTGCGTGAAATCTTT
CGAAAGTGTTTGCAAATATATAGTCTAGACCCGATTGCTTGAATGGAACT
ATGTATATCGTTATGCCATCAAGTAGAGACGTGAGCCGCTAACTGTTTTT
ATAATGTTTTGAGAGTCAAAATGCTTGGTAGCGGTTATGGAACGATTAAG
AGGGAAATATACACAAAAACTACCAGTATATACATACGACTACGAATACT
CATCCACACATTTTTTTTATGTATACAGTAGAGCCATTTATGGCGTTCAA
CATAACCGCGCCATCAGACGACTTCGTACTTATCATTCGAAGCTACATAC
CAGTATTAATTACAATACATATTAATAGCCGTGTTGCTTCTCCCAAGGGG
AGTGTTCTTCGCATCGACCGACTGAAGCCTGATCATACACCCTCCACTGC
AGTACAGAGTAATCCAGGATAGTACTGTATTAATGATGAGAAATAACACA
ATACTGGTATAACACAATGAAAAACAGAAAGGAAAGAAGAGTTGACTACA
AGTATTTACAGTACATTGCCTCACGAAGATCGGAGAACCACAGCAATAGA
ATGGAAAATAGGGGGGGAGGGGTTCCAACGGGAGACGCCAAAGCCGAGAC
GATAAGGTACAGGTACAGTATTTATACAGGTACGGTATTTATACATATTT
CTACCGGGCGGCATTGTTATTTGTCTGATTGTCCTACTGCTACCTGGTAT
CATATTTAGGTGGAATGCTTATATAGTACCAGGTAATACTTGTAGTCTAA
ACAGTACAGCCAGTGTGATGATGGAAGAGCTTTTCGTGTTTGGTGCGTGT
GTGTATGTTCGTTCTTTTTGTGTTTGGTGCATGTTTTGATGTTGTGACAG
GCGTACCCGATATTGGGCAAGGCATACTTGCTGGTGGGAAAGCTGGAGCA
GGCCGAAGACGTCTTCAGGGCAGGCATGCGAAAGGTGAGAAATAAAGAAA
TAAGAGGGAAGAAGGGTGGACGGAGACGGAGTCTGCTTTTCTCCCTGACA
CGCTCGGTGCATGTTGATGGCAGTAATGTAAGGCTGTATTAATAATATTA
ATGGTATTAATAGTAGCTGTTCAGCATTCATGGTTCCCACGCGCAAGCAT
AGCTCGAAGGGTCGGTTCTAACGAAGCCGAAAAAAATTGGCAAATTTGGA
GATTTCCCATACTTGGTACCATTAATATTAATACTAGGTTTCTAATGCAG
CGTTCTTTCCAAAGTTTAGAGATGACGCCTCAAGACCTTTTATGAATACC
CTCTAATTTAAGGGTGGCTTCTTCACTTCGAGACCAAGTGAAGCCAACGT
GACTTCCGATAAGTTCAAGTTCTTGATCCCAAGTGCCTCTAACTCCCACT
ATTAATAAATATAATGCTATCTCAACGGATAAGCCAAATTTCAGACGAAG
ATATATCTTTTAGCCGGAACAGCCCCCAAAACGATTTTCTCGAGGCGATC
TGCTCTCCAAAAGCATACATTGCCACGGTTTTAAGCTCTATCGGCTACAT
GCTGTATCGAAAGAAGCGCTTGAGTTCCCTTTGCGGCAGGTGCCCCTCAG
AGTCTTATGTCGATTTTTAGGTCCCGAGATGGCTTGTGGCTTTTGATCTT
GTTGCTGGTGCGTCTATTATTATTATAAGTTAATACTCCGGAGTAATGAA
TAATGAATCCGATGCAGCACCTCCCGAGAAGGCCCTCAAAACCAATACGA
GTATAATCTGACCAATCTAGAGGTTGTTTTTCTTAACGTCGCAATCAGGC
GTCAAGTACCTCGGTTCGTTTCCCTACTTAAGTCAAGAGCTTTAGAAATT
GTGGCCACTTGCAAACGTGGAAAGCAGATCGCCTCAAGAGTCCCGTCCTG
GCAGCAGTTTTCAGTCTATAACGTGCTGATGGTGATTGTACCGACCACAG
AATTTCGTTTTTCCGTTGTTGCCAGTCTGAGTGAGTTGGCGGCCCTTGGG
ATCAAGAATTTGATTCGCCCGGTTCTCTACAGCTACGATTTAATATACCA
GGTAGTTATCGGAGGTTACGTTGGCTTGACTGGTTTGGGAAAATGCCTAA
TTTACCACTCATTGCCGGTCGCCTCGGCCCCGGTAGCTCAGAGGTAACCT
CGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCTGGCAAACGGGAT
TTTTCTCACTAAGAACTAAAAAACAAAATAAAAAATGCCCAACGAGTGGA
GAGCGATTGAATTGTTAACACACAAAATTCGACTTCACGGTCGACGAGGG
AAAAGGAATGGCTGAATCCTTCTCGCGAGAAAAATTTAGGCACGCACCGC
AGAGGGAAGGTGGATGAGAAATCCTGTGTGACCCCGGCTGGCACGTCCAA
CGAACTTGATGTCCAGAATGAATGGGAAGAAAACACACACACATGCTTCG
ATCCCTACGGTACAGTACGTACAAATACGACGAATCGTGTTCAATATCGC
CCGACAGGTCTGAAGCACCCAAGGGTGACTAAGAACTCAACTTTCGAGCA
ATCTCCATTGGGTTTTTTGGGGGGGCAAATTCTTGCGTTAGAACCGACCC
TTAACAGTATAATCAAAAGTAATATTATTAGTATCAATACTGTTAACAAC
ACGTGGTAGTACTATAACAGTAAAAATAATACCGTAGTATGTATACTTGC
CTTATTAAAAATAAGATTTGCACTCGGCCGTCTCTGTTTCCTCTCCATGG
CACGCGTTCTTTTGTTGCATTGAATGTTCAGGATAGCGACTGCGAAGAGG
ATGAGCTCCAAGACGAGAAATGTCGCCTCGGCCTGTCGAATGTGCACGCC
GTCAGAGCACACCTCGAAAACGCCAAGAAGGCTGTAGAGAGGTAAGCACG
CCCAGCACAGTACAGACACAGCTCTACCCCTACCCCAGTAGCCGCGTGTG
GAAAGGCATCAGGCGCCGCTCCATTTCGTGGAGATGTGTAGGCGTGTGTG
TGTGTTGTGTGATCATGCTGAGCAGATTGGGCACCAGCAAGGTATGGTTG
CCAATCGTATACACAGCTAGCTGCTCTAGATGTTTTGTTTTTTCGATGAA
GAAGGTCTGCAAGTATCACCATGCAGGCAGGGACACCAAAAACAAATACT
TCGCGGAGTGTATAGTATACCTGGTAGAATATAGGGTTAGGGTTGATCGA
GAACGCCTTCCCTGTTGCAGTTTGTTGCTTGTTTCTTGGTCGAGAACGCC
TTCCCCTTGTGTCGTAATCCAGTTAGTATTTAAAAGTACTACTTGTACTA
CTAATAGTATTACTTTTTAATACTGTAGTGCACTTGTACGTGGTACGAGC
ACAGCAGTATCTCGATTGTACTATTAATATTAATAATACACATATATGGC
TCTGCTTTTGGCTTGTCCCGTGTTCGCCTCTGCTCGAACAGGGACGATAA
GAAAAGTGCGACGGAATACGCCGATCGAGCGCTGAGTGATTCTCCTAACC
TGGAGGCAGCCCAACACTTAATGGTGAGCACGTTCATCACTTCTAAAGCT
CTGTACAGTATTGCTTTTTAGTTACAGTATACTTTTTTGGGTTTTCTTCA
AGTCCACAGGCTGCATTTGAAAGCCAAATGCAATATAACATTCGCGTTTC
CCCTTGTCTGATTCTTGGAAATAGATACACAAGGTACATTATACAACGTT
GTCTTTACAAATAACGTGGTTTGATTCTGGAGCAAAATATGACACAATAT
TCTGTTCATGTTCTTTTTTTAATTCTCCTAAGACCACGTTCTCACTATTA
TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGGCACTTACTC
GTTTTTGTTACCGTTTGAATACTTATAAATGGTTTTACTACTGTATTAAT
AGTTGGGTGTACTCATGGCGGAAAAGAAGTGGGAGGAAGCATGTCGAATG
TGTGAGATTTGGGCGTATAAACGAGATATGTCCATCGGGCGAGTCCACAT
CCTGGAGGGCTTCCCGGAAGGAGGGGGCTCGCCGCTGCTCTGCCTCCAAA
TGATGCATGACACCATCCGCGAGGGATACATAAAATCGCTCCGGTGAGTT
GCATATCATAGTTGTTTTTTTCTCTGCATGCATATTCGACCTTTATTGAT
TTACTTACAGCAGGGATGAAATAGACCAGGTACATACAGTTATAAGTTAT
AGTATAGGGCTCAGTTCTGCAGGGAACGAGTGGCGCCCTGAAGAACTGAG
GACTTAGGACTTGTGTAGTCCCGGAAGCTGGTCGCACCCACGATATACTT
GGATGTGAGAGATGGTCGGCCATAGCCATGATACTGTATCGTGTAAGTAT
AAAGAAAAAGGAAAACTTATTTTTCATCTCGGGTATAGTCTAGTCATTCT
ATTACTGTACTGTATTTCAGAAATACCGAAAGAAATTACAGTTTCGTCAG
ATAAAAAGATATTTTCTTTAATGTCGTCTGCTAATTACGGTGTTTTGCAA
AATTTTAAATTTCGCGACGATAATACGTTCTTACAAGGGGGCAGGTGTTC
TCTATGATAACGAAATATTAATAGTAACGCATACCAGGTACCAGGTACCA
GTAAGGATTTACTTACTGTTATAGTATAATGTATATAAGGTAATGTATAA
GGATTTACAGGGTTGACAGGGTTGCACGAGGAAGCCAAGGATTTGGGGAA
GGACACCTCCTCATTTTTGCTGTACAACGGTACAATAATACTGGTACAAA
AACTCAGAACAGCAAATTTACTGATAGCCCAGTACAGTACTTAGTTTTTG
ACTTGTTACTGAACTATTCTGTTTTTGTACAGTAGCCTTTTAATAAAACT
TAATTTTCCGTCATTCGAGTACAGTACAGTACAGTACAGTACAGTACTTC
GCTTGCCCCTGAATTTTGACCGCGTGGGACGTTTAGTTGGACCAAGAAAA
TATTACTATTATAGTACTGAGATGTGCTCTACTGTACTGTACTGTACTGT
ACTGCACCGAATCCACAAAACATCGTCTCATATCGCAAGTTGTGGTGCTG
TTTTATCTCATGTACCTCGATCCACGCCGTTACCTATTCGCGTCTGTTGC
ACATGTAGATGTTCAACGCACTTTAGTAGTAACTACTATACAGTACCGTA
GTAACTATTGATAATACAATTACACGGTACAGTTGGTGTTTCCGTCGGTA
ATTTTGTACTCTCACGGTTACCAGTATTTCGTTTGTCACACAAAATGTTT
GCCTCAGACGGACTCTTTCGGGCTCAAAAAGCAAGGACGAGATCTTGAAA
AATAAAATACTTATCACCAGTTTCTAGGAAATCATTTTCGAGACCCTTTC
TTGTGGTAAAGTCGATTTGGTTCGAGGGCATGCATTTTTGGGACGCGGTA
ACCGAGAGGAGGGAGTTTGAGCACTTCTCGTGGGAGGGCATTTCATTTGA
AAATGGGGATAGTACTGTAGTGATATGAGAGGCCTTTGCCCGATACAAGC
TTTCTGACTTCTCTGAGACTTACGGCTAGATAGATACCACACAACTACAC
GGCGTATGACCGTTGCTGAGACGTGCTCCTGATGTAAGGCGCGTGAAGGG
AGAGCTTGTTGTCTTCCGCGCTTACCACGCCATAACTTCGAGTGGTGTTG
AGACCCCCGAAGATGAAAAGCATCGCAAGTGTCCAAAGTTTTGCAGCTTT
TGTGACGTTCTTCAGACCACGCCGCCGCGTGAGGACCATGGCGGGTCATC
CTCTTGGAGTTCAAATGTTGAGAATGGGCTACCTACCGTATTAATAGCAG
ATCGGGCGATTTGTCACACTGAGGGCATGCGTCTTGTGTTGGAGACTATG
ATGGATCATGAGACTACTGTACGCGTGAAACGAGCAAGATTTTGTGCCAA
TAGCTAGCTACCGGTATAATAGCTCCAGGTACCTTTACGTGGCGCTAAAC
ACAACGGTGGTAACCTCAAGAGCATGACATGAACCACGAAGGAGAGGCCG
ATCTGCCTCCTCTGATTAGATCCCACCAATATTTTGTCTGCATGATTAAA
TCCCGATCCAACATCACTTTATACTGTAGTACAGCATACAGTGATGTAGT
TTTTTTGCAGTCATGCAGCTCTAGTCTATAGCTCTAAATTCTGAACACTG
CTGTGAGCTTCCATCCAGTTTCCTTCGTGTTGAGACTGAGACACTAAAGC
TCTAAATGCTGGAACACTGCGGTGGGCTTCCATCCAACTTCCTTGGTGTC
GGGACACACGATTGTTATATTAATAATAGGCCTCTTTACTTTTTTTTGTG
GACTTCGATGAGCCTTGGACGCCACTATTAATAGCAACCCACGACCTGCG
TCTTCGATTTCTGAGTAAGTCACCATAAGATAGGTTCCCTCGTCTTTTAT
CCTGCGAAGCATTCCTTGCTCATTTCCTATTAATATTATAGGATTTTTTT
GCTTCGATTTTTGTCCCCATAATATTTTTTTTGAAGAAAATACAGAACGC
ACCTAGACCTTCTGAGCATCCCCCAGTCAGGGGGAAAAAATGTCAAAATG
TTCAGGTCGGCTCAAAGGCTGCAAATACAAAACCTCTTCATGGCATTCAA
ACGGGTTCCCCTATGGTAGGGCCGTTGGGTCAACAGTATAATATCGGGGA
GAAGCCCACCGTTGTACTGTACACTTACATTGATCGCCATGCAGGGACAC
CATAAAAACAGCCAAGACAAAACAACAGTAGTACATCATCAAACAATAAA
GACGAATCCAATACAACATTTGAAACGATTACAGAGGACCACGGCGATGT
AGGCATAATCCAAGTACACGAATCCGTATTCACCTGGAAGTAGACGAAAA
GCAGTAGGCGATCACACAAGGAGGTAAGAGGCACGCGGAAAGAACTGAGT
TCCTCGCTCCAACTTGTCAGGGCTACGACGCACAGATGCTCCTCATGCTC
GAACTTAGCTATGACCCCGCGTTGGTCAGAAACACAAAGGGAAGAGCGTC
TGTTTGTCAAAAGTGATCAAGAGGGCCTCAAACCAACTCGTGTAATCCAC
CATACGTTGACCCGAAATGCCTTCAACTCCGTGTCTTTTTTCTTTTTTTC
CTTTCCGACGGTCGTCATCTTGAACGACGCCATTCTTCCTTGGATCTTCT
CAATGCAGCGCGGGACTATCTAACTGTATCGTTGTACTTTGGTTACAGTA
AATTTTATCTAATTAGCTAGTCGGAAAAAAACATTGTCTCAGCCATCTGG
CAATATTTTTTAACGATCTAGAGAGGGTTTTAATAAGGTAATAATAAAGA
AACACAAACAAAACAAAACAAAACAAAAATCACCATCCGTAGCGAGGCTG
AGAAGGTCGGATGACCACACTCTACCAATATGCTGCCCGCAACCGAAGTC
AGGGGCATCCAGCACTACAGCCTTAATATTGATGGTCTCACGTACGTGCA
CCAGACCACCAATTATATTTGAAGTTTCAGCTTCGCCATTATCTTGGTAT
GCTGAAAAGTGGCACGTTTTTATGGCACCCTCACAGGAATGCCGGGAGAA
CGGACGCCTTCACGGCGGCGCTGGATGATGCAACTGACATGGGCTTTGCA
TGGGCAAAGAATATGACGCGCCGGCGACAGGAAGCGATGGAAAAGAAAGA
CGTGAGCACGGGAAAACGTCTGCCGTGGGTGTACTACCGTAGGCTAAAGA
ACATTACACGAGCATTACCGTAACCCTCGTAACACCATTATAGTACCAAA
ATAAGTTGAATTGACATCCGCCCGCCTCAGTGTTTTCGTGACTCCTTCAA
ATTTACCAAAAGTAGAGGGCGGGCTACCGGTACAGTATCTCTAGTATCTG
TACAATATATGCTGCTATTAATAGAGATGAGGGAAGGGATGGGGAGAACC
TTGATTAGTTTATATGGTACTCCGGTATTATACTTATTGCCTGTACAAGT
AGCAGTGAAACCTCTACGCTACAGTAAAACTCAGTAGCCTAGGTTTGCAT
GGGTTAAGATTAGCGGTACGGTTTCGCGTGTCTTCAGATTTTAAGATTTT
TGCTGTCCAACGTTATCGTCTGGCATCCCCGGTTCCCCGTCCGCTTGTAA
CCCAACCCGCCTCCGCTCGTCCTCTCGTCCTCTCGTCCTCTCGTTGATAT
CCAGCGCGCCGACGAAGCTTACGCTTCTGGTCTTTACCTCGTGGCCCAAA
AGCTGTATACCGAGGCCATTGGCGTGGATGAAGAAGACATCCTCACCAAT
GCACTTCTTTACGCCAACCGGGCTGCAGCTCTTATGAACCTCGGGAAGAA
CAAAGACGCGCTGAAGGACTGTGAGCAGGCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig720:338018..346498-

>mRNA_F-serratus_M_contig720.18451.1 ID=mRNA_F-serratus_M_contig720.18451.1|Name=mRNA_F-serratus_M_contig720.18451.1|organism=Fucus serratus male|type=CDS|length=1662bp|location=Sequence derived from alignment at F-serratus_M_contig720:338018..346498- (Fucus serratus male)
ATGCTCGGCCGATATGTGTACGCGATCGCCGACTGCGGGTTGGCCCTTTT
GGCCGACATCGGCTACGACCGGATGCTCGGCCGATATGTGTACGCGATCG
CCGACTGCGGGTTGGCCCTTTTGGCCGACATCGGCTACGACCGGGCGTAC
CCGATATTGGGCAAGGCATACTTGCTGGTGGGAAAGCTGGAGCAGGCCGA
AGACGTCTTCAGGGCAGGCATGCGAAAGGCGTACCCGATATTGGGCAAGG
CATACTTGCTGGTGGGAAAGCTGGAGCAGGCCGAAGACGTCTTCAGGGCA
GGCATGCGAAAGGATAGCGACTGCGAAGAGGATGAGCTCCAAGACGAGAA
ATGTCGCCTCGGCCTGTCGAATGTGCACGCCGTCAGAGCACACCTCGAAA
ACGCCAAGAAGGCTGTAGAGAGGATAGCGACTGCGAAGAGGATGAGCTCC
AAGACGAGAAATGTCGCCTCGGCCTGTCGAATGTGCACGCCGTCAGAGCA
CACCTCGAAAACGCCAAGAAGGCTGTAGAGAGGGACGATAAGAAAAGTGC
GACGGAATACGCCGATCGAGCGCTGAGTGATTCTCCTAACCTGGAGGCAG
CCCAACACTTAATGGGACGATAAGAAAAGTGCGACGGAATACGCCGATCG
AGCGCTGAGTGATTCTCCTAACCTGGAGGCAGCCCAACACTTAATGTTGG
GTGTACTCATGGCGGAAAAGAAGTGGGAGGAAGCATGTCGAATGTGTGAG
ATTTGGGCGTATAAACGAGATATGTCCATCGGGCGAGTCCACATCCTGGA
GGGCTTCCCGGAAGGAGGGGGCTCGCCGCTGCTCTGCCTCCAAATGATGC
ATGACACCATCCGCGAGGGATACATAAAATCGCTCCGTTGGGTGTACTCA
TGGCGGAAAAGAAGTGGGAGGAAGCATGTCGAATGTGTGAGATTTGGGCG
TATAAACGAGATATGTCCATCGGGCGAGTCCACATCCTGGAGGGCTTCCC
GGAAGGAGGGGGCTCGCCGCTGCTCTGCCTCCAAATGATGCATGACACCA
TCCGCGAGGGATACATAAAATCGCTCCGGAATGCCGGGAGAACGGACGCC
TTCACGGCGGCGCTGGATGATGCAACTGACATGGGCTTTGCATGGGCAAA
GAATATGACGCGCCGGCGACAGGAAGCGATGGAAAAGAAAGACGAATGCC
GGGAGAACGGACGCCTTCACGGCGGCGCTGGATGATGCAACTGACATGGG
CTTTGCATGGGCAAAGAATATGACGCGCCGGCGACAGGAAGCGATGGAAA
AGAAAGACCGCGCCGACGAAGCTTACGCTTCTGGTCTTTACCTCGTGGCC
CAAAAGCTGTATACCGAGGCCATTGGCGTGGATGAAGAAGACATCCTCAC
CAATGCACTTCTTTACGCCAACCGGGCTGCAGCTCTTATGAACCTCGGGA
AGAACAAAGACGCGCTGAAGGACTGTGAGCAGGCGCGCGCCGACGAAGCT
TACGCTTCTGGTCTTTACCTCGTGGCCCAAAAGCTGTATACCGAGGCCAT
TGGCGTGGATGAAGAAGACATCCTCACCAATGCACTTCTTTACGCCAACC
GGGCTGCAGCTCTTATGAACCTCGGGAAGAACAAAGACGCGCTGAAGGAC
TGTGAGCAGGCG
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