prot_F-serratus_M_contig720.18444.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig720.18444.1
Unique Nameprot_F-serratus_M_contig720.18444.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length213
Homology
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BLAST of mRNA_F-serratus_M_contig720.18444.1 vs. uniprot
Match: D7FNJ2_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ2_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.270e-34
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 0 
Query:   44 PLDVMPAPSYKPRPTDPYTIEEAAEVMETAKAQFETAIQERADKEAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQEETFLRDLNASIEGSGANPWARICDLVDLKAPVLPAARSSSRGGGS---------RKSSALT-AGVEGEDAFRATEKMRSLIIQMKADAAHDAAVADS 212
            PL     P Y+P+PTDP ++EEAA VME A++QF+  ++ERA+KEAA+A                              EQEETFL+ ++ASIE S +NPWARICDLVDLK PV+ A  S S G G          RK SA   +G+E E+ FRATEKMRSLIIQMKAD A   A  D+
Sbjct:   97 PLQASSTP-YQPKPTDPCSLEEAAGVMEEAQSQFDAVVKERAEKEAAKAAEVKRLAEEELDGFYDGRTDEVARRQARSREQEETFLKGVSASIEESTSNPWARICDLVDLKKPVISAKSSFSAGAGXXXXXXXXXXRKGSATAQSGMEEEEVFRATEKMRSLIIQMKADTAESNAGGDT 274
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig720.18444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNJ2_ECTSI1.270e-3448.04Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..102
NoneNo IPR availablePANTHERPTHR10639:SF7CLATHRIN LIGHT CHAINcoord: 30..203
IPR000996Clathrin light chainPFAMPF01086Clathrin_lg_chcoord: 55..180
e-value: 1.5E-12
score: 48.1
IPR000996Clathrin light chainPANTHERPTHR10639CLATHRIN LIGHT CHAINcoord: 30..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig720contigF-serratus_M_contig720:236186..238573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig720.18444.1mRNA_F-serratus_M_contig720.18444.1Fucus serratus malemRNAF-serratus_M_contig720 231056..239562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig720.18444.1 ID=prot_F-serratus_M_contig720.18444.1|Name=mRNA_F-serratus_M_contig720.18444.1|organism=Fucus serratus male|type=polypeptide|length=213bp
MAEAYFPDDMSPFDGGSAGGYTMPEPALFMDDNNQQYGDMPQHPLDVMPA
PSYKPRPTDPYTIEEAAEVMETAKAQFETAIQERADKEAARAAEVRRRAE
EELDGFYDQRTDEVARRQARSREQEETFLRDLNASIEGSGANPWARICDL
VDLKAPVLPAARSSSRGGGSRKSSALTAGVEGEDAFRATEKMRSLIIQMK
ADAAHDAAVADS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000996Clathrin_L-chain