prot_F-serratus_M_contig72.18424.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18424.1
Unique Nameprot_F-serratus_M_contig72.18424.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length771
Homology
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BLAST of mRNA_F-serratus_M_contig72.18424.1 vs. uniprot
Match: D7FUR5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR5_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 6.560e-63
Identity = 134/283 (47.35%), Postives = 165/283 (58.30%), Query Frame = 0 
Query:    1 MNLTKAFRGGNPASTLAMLQPWESQEGAHTPSGSKMPIVICGWLSKMKREQRKFRSTWNRRWFTVEDGALHWYKTPSSDACGRILLTDIQGVRKFDGVGKGGGAQGNFAFVVCGTNRDVLLRAESASDESRWIRGLTLQIDLVHGGTFQGPLSNKNRRRSANASQLAVAGAVAATSG------------------------------VEERSHSIDIDGRMRTMVNEREHGSAGRTEDTTGSSDAHPQGRKARDESPRPFHSHTSTPPFRTVKMIPRDPRGIS 253
            MNL  A  GG P  T      WESQEGAHTPSGSK PI+ICGWL KMKRE RKFRSTWNRRWFTVEDGA +WYKT SSDACGR+ L DIQ VR++ G        G++ FVV  T+R++LLRA+SA+DESRWIRGLTLQ DLVHGGTFQGP S KNRRR+    +L   G   A  G                                E S   +I+ ++R ++N+ ++ + G    T  + D           + +P   ++   P +  K+ PRDPRGIS
Sbjct:    1 MNLALAAFGGYPVPT------WESQEGAHTPSGSKTPIIICGWLLKMKREHRKFRSTWNRRWFTVEDGAFNWYKTSSSDACGRLSLLDIQSVRRYVGT-----EHGSYTFVVHATDREMLLRADSANDESRWIRGLTLQTDLVHGGTFQGPPSAKNRRRTVL--KLMGEGCTGANVGDGRGDDSKTTGWHQKGDRGGGGGNSREGEWKGEGSQFREINKKIRALMNDHDNRAGGGGSSTGAAGD-----------NSKPTRFYSERQPAQKFKITPRDPRGIS 259
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BLAST of mRNA_F-serratus_M_contig72.18424.1 vs. uniprot
Match: A0A835ZH79_9STRA (PH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH79_9STRA)

HSP 1 Score: 140 bits (354), Expect = 9.030e-36
Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = 0 
Query:   37 PIVICGWLSKMKREQRKFRSTWNRRWFTVEDGALHWYKTPSS-DACGRILLTDIQGVRKFDGVGKGGGAQGNFAFVVCGTNRDVLLRAESASDESRWIRGLTLQIDLVHGGTFQG 150
            PI +CGWL KMKR QRKFRSTW RRWFTV+DG L WY +P++ ++ G I L  I+ V +F+      G QG+F+FVV  ++R++LLRAE+ +D SRWIRG+TLQ+DL+ GGT QG
Sbjct:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEA-----GCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG 110
[Close]
BLAST of mRNA_F-serratus_M_contig72.18424.1 vs. uniprot
Match: A0A7S2HE46_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE46_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.300e-25
Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 0 
Query:   37 PIVICGWLSKMKREQRKFRSTWNRRWFTVEDGALHWYKTP-SSDACGRILLTDIQGVRKFDGVGKGGGAQGNFAFVVCGTNRDVLLRAESASDESRWIRGLTLQIDLVHGGTFQGPLSNKNRRR 159
            PIV+ GWL K+KR QR F STWNRRWFT++DG L+WY    S +  G I L     V  F+      G QG F+F++  ++R++ LRAESA     W  GL LQ+DL  GGT  GP +  NRRR
Sbjct:    9 PIVMRGWLLKLKRNQRLFMSTWNRRWFTIQDGRLNWYSGKRSKNPSGSIDLEQFTDVEPFEI-----GGQGCFSFIIRTSDRNLFLRAESAQKLKYWKTGLQLQMDLFAGGTRLGPPTASNRRR 127
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUR5_ECTSI6.560e-6347.35PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835ZH79_9STRA9.030e-3657.39PH domain-containing protein (Fragment) n=1 Tax=Tr... [more]
A0A7S2HE46_9STRA7.300e-2548.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 38..143
e-value: 6.4E-16
score: 68.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 39..137
e-value: 1.5E-10
score: 41.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 37..141
score: 12.462
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 30..143
e-value: 2.0E-17
score: 65.0
NoneNo IPR availablePANTHERPTHR14336TANDEM PH DOMAIN CONTAINING PROTEINcoord: 24..239
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 31..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:820792..829516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18424.1mRNA_F-serratus_M_contig72.18424.1Fucus serratus malemRNAF-serratus_M_contig72 820426..829657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18424.1 ID=prot_F-serratus_M_contig72.18424.1|Name=mRNA_F-serratus_M_contig72.18424.1|organism=Fucus serratus male|type=polypeptide|length=771bp
MNLTKAFRGGNPASTLAMLQPWESQEGAHTPSGSKMPIVICGWLSKMKRE
QRKFRSTWNRRWFTVEDGALHWYKTPSSDACGRILLTDIQGVRKFDGVGK
GGGAQGNFAFVVCGTNRDVLLRAESASDESRWIRGLTLQIDLVHGGTFQG
PLSNKNRRRSANASQLAVAGAVAATSGVEERSHSIDIDGRMRTMVNEREH
GSAGRTEDTTGSSDAHPQGRKARDESPRPFHSHTSTPPFRTVKMIPRDPR
GISTSLRRRPLSMSLSFSPSRAAKAPGEAAADGCGGACGEFQGSGGGGGS
SGGEARRRRGSSRVVPVFSSPKSRIDDACRRAETRGENRSESGDERRPNG
ISEGGNSGGTFVDARVDRASKRHQLQQSRPPLPLTPPIFNDRNSRPGSPR
TVGGGIAHEPAHDDTSDPGRELDSDRGRGGDCEDGCCWGKGLEHEGTRGW
EGGRERTVRRSISTMDGDRHVPSSRTRRHADHGKGRREEAGDGSSSGGGK
VGQPSKACRRPGGLGSLTRAGAHDGGERRSRHDYYQDRIDREVERGACSS
SERSANTLGNPFAEHESFSVQTPRWAEHVNKCNDSICGGGGHRRRRCSDW
GPTSCTPSASLPQGKRNLGDERTRSFGVNDIDGRRNLDSEGKNFAKGRKF
DEKRQKTIEKIRDFDEDDVDDDDYNDQEEAATRGGISAAKDRFWLRAGED
TSSARRGSRSASSVTAEDSWSAGMVKRSFLEDDTLSTSKLGSSGRSSSRS
GYQRPSRRYLVQQAQNRKDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf