prot_F-serratus_M_contig72.18408.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18408.1
Unique Nameprot_F-serratus_M_contig72.18408.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length112
Homology
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 4.770e-52
Identity = 80/112 (71.43%), Postives = 93/112 (83.04%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            +GGDCDELRIQSTG TD+HEVR HGG++YFE+TIVTSWD   K+PQ  Y  GRSF+NCVSE  +   C G +QN+ GECRMDIINSE+GYLGY +SESYGLTWKVRGFC D+
Sbjct:  149 IGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDL 260          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.110e-51
Identity = 76/111 (68.47%), Postives = 92/111 (82.88%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            GGDCDELRIQSTG  D++EVRGHGG++YF +T+VTSWD   K PQ  YE GRSF+NCVSE  +   C+G ++ND GECRMDIINSEMGY+G+ ++ESYGLTWKVRGFC D+
Sbjct:   41 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDL 151          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 4.650e-51
Identity = 80/119 (67.23%), Postives = 94/119 (78.99%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWK--------VRGFCVDM 112
            GGDC++LRIQSTGS D+HEVRGHGG+LYFE+TIVTSWD   K PQ  YE GRSF+NCVSE  +  DCEG ++N+ GECRMDIINSE+ YLGY +SESYG+TWK        VRGFC D+
Sbjct:   62 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDL 180          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 5.480e-51
Identity = 80/111 (72.07%), Postives = 95/111 (85.59%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            GGDC++LRIQSTGS D+HEVRGHGG+LYFE+TIVTSWD   K PQ  YE+GRSF+NCVSE  +  DCEG ++N+ GECRMDIINSE+ YLGY +SESYG+TWKVRGFC D+
Sbjct:  513 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDL 623          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.830e-49
Identity = 78/120 (65.00%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVR---------GFCVDM 112
            GGDCDELRIQSTG  D++EVRGHGG++YF +T+VTSWD   K PQ  YE GRSF+NCVSE  +   C+GM++ND GECRMDIINSEMGY+G+ +SESYGLTWKVR         GFC D+
Sbjct:   86 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDL 205          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D7FZV0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV0_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 6.720e-48
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            +GG+C ELRI+ST  +D+ E+RGHGGNLYFE+TIVTSWD D + PQ  Y+ GRSFI CVSE  +  D   +  N+ GECRMDII+SEMGYLGY+ SE+YG+TWKVRGFC D+
Sbjct:    3 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKGGRSFIRCVSEVLTGEDTCAI--NNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDL 112          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.800e-45
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            +GG+C ELRI+ST  +D+ E+RGHGGNLYFE+TIVTSWD D + PQ  Y+DGRSFI CVSE  +  D   +  N+ GECRMDII+SEMGYLGY+ SE+YG+TWKVRGFC D+
Sbjct:   74 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCAI--NNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDL 183          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.880e-36
Identity = 68/112 (60.71%), Postives = 83/112 (74.11%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSE-YASTVD-CEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVD 111
            GGD   LRIQSTGS DY+E+RGHGG+L F +T VTSWD D K   T+Y+  RSFI CVSE  A   D C+G + N  GECRMDII SEMG +GY+ +ESYG++WKVRG+C +
Sbjct:  466 GGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSE 577          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 5.200e-36
Identity = 66/113 (58.41%), Postives = 82/113 (72.57%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYE--DGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVDM 112
            GGDCD LRI+STGS  Y E+ GHGGN+YFE T VTSWD  +K  + +Y+  +GRSFI C+++Y     C G S  D G CRMDII+S MG +GY+ SESYGLTWKVRG C ++
Sbjct:  311 GGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDT-SKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNL 421          
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 8.480e-35
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYEDGRSFINCVSEYASTVD--CEGMSQNDYGECRMDIINSEMGYLGYNNSESYGLTWKVRGFCVD 111
            GGD DELR+ ST  T Y  +R HGG+L F  T V SWD  T SP  D  DGRS+I+ +SE  +  D  CEG ++N  GE RMDI NSE+GYLG+ +SESYGLTWKVRGFC D
Sbjct:  128 GGDADELRLLSTTDT-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI4.770e-5271.43Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI1.110e-5168.47Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE4.650e-5167.23MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI5.480e-5172.07Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE2.830e-4965.00MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FZV0_ECTSI6.720e-4864.29Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI3.800e-4565.18Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE3.880e-3660.71MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LRN0_ECTSI5.200e-3658.41Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JU98_9PHAE8.480e-3558.93MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..111
e-value: 4.4E-25
score: 90.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:143896..144231 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18408.1mRNA_F-serratus_M_contig72.18408.1Fucus serratus malemRNAF-serratus_M_contig72 143896..144231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18408.1 ID=prot_F-serratus_M_contig72.18408.1|Name=mRNA_F-serratus_M_contig72.18408.1|organism=Fucus serratus male|type=polypeptide|length=112bp
LGGDCDELRIQSTGSTDYHEVRGHGGNLYFENTIVTSWDPDTKSPQTDYE
DGRSFINCVSEYASTVDCEGMSQNDYGECRMDIINSEMGYLGYNNSESYG
LTWKVRGFCVDM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold