mRNA_F-serratus_M_contig718.18379.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 4.200e-167 Identity = 228/294 (77.55%), Postives = 263/294 (89.46%), Query Frame = 1
Query: 43 AVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
AVEACLSAG+PL AL N +K+FLHHLG +LPG +HL+N+IPFIEKKE Q++L+EVGDS Y++ FDETPYR ACFG+GIRFVNK G+ITQRVL+LS+LSKSMDFKAI+GEVMKI VD YK+DR +C FMLDGC AN+KALDTLL++FPN+VGVRCFSHLLNNCGNEL+SE+ DKFAGHLHVLL+HS NA+DLWL+ETKV PPKPVSHRWSSR+VRNN +V WQ KTF+DKFTS +ESRSKSA A+REEL RVRPDGVHQELILQLGFA+ DVGIHL RATHLLEGDGFL+
Sbjct: 2 AVEACLSAGVPLNALENSLMKDFLHHLGARLPGARHLANYIPFIEKKEKQRILDEVGDSRYAITFDETPYRAACFGIGIRFVNKEGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDGFLL 295
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 2.050e-144 Identity = 211/308 (68.51%), Postives = 252/308 (81.82%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETK-VQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFL 921
G SL +EL+TQ+ AVEACLS+G+ L AL P KEF H+G +L +HL+NHIPFI KE +K+L+E+GDS YS+ F+ETPYR ACFGVGIRF+ K G+ITQRVLSLS+LSKSMDF AINGEVMK++VD Y+LDR +C FMLDGC+AN+KALDTL ++F + GVRCFSHL N GNE+ S+D DKFAGHLH LLSHS NAKDLWL+ET V PPKP SHRWSSRF RN+ +V WQ K+F++KFTS DES+SKSA A+R+ LA VRPD +HQEL+LQL FA+AADVGIHLTRATHLLEGDGFL
Sbjct: 271 GNSLHPKELMTQLMAVEACLSSGVALNALDQPLKKEFFRHVGARLQTARHLANHIPFILNKEKKKILDELGDSRYSITFNETPYRAACFGVGIRFITKAGKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEGDGFL 578
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JNC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC2_9PHAE) HSP 1 Score: 328 bits (842), Expect = 8.920e-110 Identity = 156/198 (78.79%), Postives = 176/198 (88.89%), Query Frame = 1
Query: 331 VLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
+LSKSMDFKAI+GEVMKI VD YK+DR +C FMLDGC AN+KALDTLL++FPN+VGVRCFSHLLNNCGNEL+SE+ DKFAGHLHVLL+HS NA+DLWL+ETKV PPKPVSHRWSSR+VRNN +V WQ KTF+DKFTS +ESRS SA A+REEL RVR DGVHQELILQLGFA+A DVGIHL R THLLEGDGFL+
Sbjct: 1 MLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSNSAAAMREELGRVRLDGVHQELILQLGFAVAVDVGIHLVRPTHLLEGDGFLL 198
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 328 bits (842), Expect = 1.120e-103 Identity = 166/308 (53.90%), Postives = 209/308 (67.86%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
G +L+ +E+ QI + CLSAG+PL AL NP +K+ LH GVKLP HL+N+IP I K EE+GD Y+V FD TPYRC CFG+GIRF+ G+I QR+L LS+L+ SMD+KAI GE+ K++ YKL +RCR FMLDGC+ N+KAL L NSVG+RC SHLLN GN++ S +DKFAG L +LSHS NA D W + T PPK +HRW S + RNN +V WQ KTFID F+S DE+RS+ A R ELAR G HQE+ LQ+ FA+A D+G HLT T+LLEGDG L+
Sbjct: 245 GSTLTPKEVTQQILFTKGCLSAGVPLNALNNPTMKDALHFAGVKLPSANHLANYIPVILK-------EELGDGTYTVCFDGTPYRCECFGIGIRFIGPDGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHCANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEGDGMLL 545
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 288 bits (736), Expect = 6.480e-92 Identity = 139/198 (70.20%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 331 VLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETK-VQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFL 921
+LS SMDF AINGEVMK++VD Y+LDR +C FMLDGC+AN+KALDTL ++F + GVRCFSHL N GNE+ S+D KFAGHLH LLSHS NAKDLWL+ET V PPKP SHRWSSRF RN+ +V WQ K+F++KFTS DES+SKSA A+R+ LA VRPD +HQEL+LQL F +AADVGIHLTRATHLLEGDGFL
Sbjct: 1 MLSNSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTHKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRSWQQMKSFVNKFTSADESKSKSAAAMRDMLAHVRPDNIHQELVLQLEFVVAADVGIHLTRATHLLEGDGFL 198
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JX99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX99_9PHAE) HSP 1 Score: 283 bits (724), Expect = 1.820e-89 Identity = 136/255 (53.33%), Postives = 181/255 (70.98%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESR 765
G +L+ +E+ QI + CLSAG+PL AL NP +K+ LH+ GVKLP HL+NHIP I K+E+ +LEE+GD NY+V FD TPYRC CFG+GIRF+++ G+I R+L LS+L+ SMD++ I GE+ K++ YKL +RCR F+LDGC+ N+KAL L+ +VGVRC SHL+NN GN++ S +DKFAG LH +LSHS NAKD W + T PPK SHRW S + NN +V WQ K FID F+S DE++
Sbjct: 201 GCTLTPKEVTRQILFTKGCLSAGVPLNALNNPTMKDALHYTGVKLPSANHLANHIPAILKEEI--ILEELGDGNYTVCFDGTPYRCECFGIGIRFIDQTGQICPRLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFLLDGCSPNLKALLALVTYCRFAVGVRCMSHLINNTGNQIDSGQIDKFAGALHTVLSHSHNAKDQWRKATNTTPPKAPSHRWGSTYETNNQLVTSWQPTKDFIDAFSSSDETK 453
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 283 bits (723), Expect = 9.670e-88 Identity = 144/305 (47.21%), Postives = 195/305 (63.93%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLIS-FPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGD 912
G +LS ++ + Q+ V CLSAGIPL AL +PQ+K F ++ PG+ HL+ H+PF+ +KE+ L E+G+ NY+V FD TPYRC CFG+G+RF+N+ G++ QRVL +++L KSM + I G+V L + + L RC FMLDGCAAN+ ALD+L + SVG+ CFSHL NN G L DVD+F G LH LLSHS AK L+ E V P +HRW SR+ R+ + W G FI+ + S D+ +SK+A LR ELAR R DG Q L+L++ A+ DVG +T A LEGD
Sbjct: 10 GDTLSDRDKLLQVKLVAGCLSAGIPLHALEDPQMKAFFDFANIRAPGRSHLAEHVPFLLRKELDTTLSELGNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGD 314
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KPH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH4_9PHAE) HSP 1 Score: 270 bits (689), Expect = 2.650e-86 Identity = 134/278 (48.20%), Postives = 185/278 (66.55%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAG-IPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQE 831
G +L+ +++ +I + CLSAG + P++K+ H+ GV LP L+NHI I K+EM+ +L E+GD NY+V FD T YRC CFG+GIRF+++ G+I Q +L LS+L+ SMD++ I GE+ K++ YKL +RCR FMLDGC+ N+KAL L+ +VGVRC SH++N GN++ S +DKFAG LH +LSHS NA D W + T PPK +HRW S + RNN +V WQ AK FID F+S DE++S+ A ELAR+ DG HQE
Sbjct: 16 GCTLTPKDVAQEILFTKGCLSAGLVTFERPEQPRMKDAYHYAGVMLPSANRLANHITVILKEEMKIILGELGDGNYTVCFDGTLYRCECFGIGIRFIDQTGQICQPLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFMLDGCSPNLKALLALVTHCRFAVGVRCMSHVINKAGNQIESGQIDKFAGALHTVLSHSHNAHDQWRKATNTTPPKAPNHRWGSTYERNNQLVTGWQPAKNFIDAFSSSDETKSRKADFCWGELARLGKDGYHQE 293
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE) HSP 1 Score: 262 bits (669), Expect = 4.080e-81 Identity = 137/305 (44.92%), Postives = 186/305 (60.98%), Query Frame = 1
Query: 1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLIS-FPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGD 912
G +LS ++ + Q+ CLSAGIPL ALG+PQ+K F + +PG HL+ HIP + + E+ L E+GD NY+V FD TPYRC CFG+ +RF++++G++ Q VL + +L+KSM + I G+V L + + L RC FMLDGC AN+ ALD+L + S+GV CFSHL NN G L D++ F G LH LLSHS AK L E V P +HRW SRF R+ + G FI+ S DE +S++A LR ELAR R DG +Q L+L++ A+ DVG +T LEGD
Sbjct: 10 GDTLSNRDKLLQVKLATGCLSAGIPLHALGDPQMKVFFDFANICMPGDSHLAKHIPVLLRTELDTALSELGDGNYTVCFDPTPYRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGD 314
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KEZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ7_9PHAE) HSP 1 Score: 198 bits (503), Expect = 9.760e-59 Identity = 108/194 (55.67%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 292 KRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVG 873
KR EI QR+LSLS+L+KSMDFK I GEV +L + LD RC FMLDGCAAN+KAL L N+VG+RC S L NN G+++ S +DKFAG L +LS S NA + W T + PPK SHRW+S F RN+ +V WQ AK FIDKF+S DE+RS A REELAR+ HQE LQL FALA D+G
Sbjct: 65 KRDEICQRLLSLSMLAKSMDFKDIFGEVNNVLAR-FGLDPARCVGFMLDGCAANMKALMALTTHCRNAVGMRCMSDLFNNAGDQIESTQIDKFAGALQTVLSVSHNASEQWRAATGMSPPKAPSHRWASSFERNDKLVTDWQHAKHFIDKFSSSDETRSAKAAFCREELARLGQYCYHQEFWLQLEFALAVDLG 257 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig718.18379.1 >prot_F-serratus_M_contig718.18379.1 ID=prot_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=polypeptide|length=311bp GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHback to top mRNA from alignment at F-serratus_M_contig718:111744..113065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig718.18379.1 ID=mRNA_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=mRNA|length=1322bp|location=Sequence derived from alignment at F-serratus_M_contig718:111744..113065- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig718:111744..113065- >mRNA_F-serratus_M_contig718.18379.1 ID=mRNA_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=CDS|length=1866bp|location=Sequence derived from alignment at F-serratus_M_contig718:111744..113065- (Fucus serratus male)back to top |