mRNA_F-serratus_M_contig715.18366.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 529 bits (1362), Expect = 2.660e-182 Identity = 269/434 (61.98%), Postives = 321/434 (73.96%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEP-EASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNTFEDADGDLCYKNFAS 1425
E GC T+TDLY R+ESDG + KGPI+ LDD + + +P ++ KWLLT+EL + G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ Y GRSFLNCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT +GG AAGIFLHRSSD V+DNV++DMQDAG+A+LES +ADI++N F++VK+GIR+SLG N+V++N+F++ S GLYTYQGSDEP + SDGRP +N F +N I N GVKIKE D+T+IT N FTGTS LEF DA +T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 1.370e-179 Identity = 266/440 (60.45%), Postives = 315/440 (71.59%), Query Frame = 1
Query: 73 KSSIRWASGTGLNGRMYLEDGGCGTMTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNTFED 1389
+ S R+A+ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDDD + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE+GRSFLNCVSE + + C+G KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG AAGIFLHRSSD V+DN I +MQDAG+A+LESFDA I+ N KYGIR+SLG GNN VY N F + SQYGLYTY+GSDEP+ S DGRP N N++ + GVKIKE D+ NTF EF ++T+T WS N D
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 502 bits (1292), Expect = 1.480e-172 Identity = 258/443 (58.24%), Postives = 309/443 (69.75%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNTFEDADGDLCYKNFAS 1425
E GC T+TDLY R E+DG + KGP+Y+LD + +PTSVT KWLL +EL+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETCDG KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A +GG +A GIFLHRSSD+ EVY N I++M DAG+A+LESF+ADIHDN V++GIR+SLG G N+VYDN F++CS +GLYTY GSDEP+ S+ GRP N+F +N ++N+ GVK K +DN ++T N FTGT LEF DA T WS N+ +C N S
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITS 443
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 3.970e-163 Identity = 237/419 (56.56%), Postives = 292/419 (69.69%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY-ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNT 1380
+ GGC T++DLY + + KGP+++LD +D + + T+ TGKWLLT++LFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE Y+DGRSF+ CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG +AAGIFLHRS D EVY N I +M DAG+A+LE+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSDEP GRP +N FY+N I TETGVKIKE+DN IT N F+GT+ +EFN+A D WS N+
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 3.900e-148 Identity = 217/348 (62.36%), Postives = 249/348 (71.55%), Query Frame = 1
Query: 148 MTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 1164
MTDLY R E DG + KGP+Y+LDDD + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSFLNCVSE + + C+G KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT +GG A GIFLHRSSD V+DN I +MQDAG+A+LE+FDA I+ NT KYGIR+SLG GNN VY N F + SQ
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 1.450e-138 Identity = 233/405 (57.53%), Postives = 266/405 (65.68%), Query Frame = 1
Query: 211 ILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNTFEDADGDLCYKNFAS 1425
+LDD + + SPTSVT KWLL SEL+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETCDG+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG A GIFLHRSSD+ EVY G D P+ S+ GRP N+F +N I+NT GVKIK +DN +I+ N FTGT LEF DA T WS N+ +C N S
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSG---VCIDNVTS 346
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 3.180e-136 Identity = 221/431 (51.28%), Postives = 284/431 (65.89%), Query Frame = 1
Query: 121 YLEDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDET--CDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEA-SSDGRPGENSFYDNIISNT--ETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSSNT 1380
Y E GGCGT+T +Y ++ E DG P+Y+LD+++D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E DGRSF+NCV++++ CDG+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ +GGE+A GIFLHRSSD EV+DNV+Y+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F +QYGLYTY GSD+P+ +S+GRP +N F N I GV IKE D+ + N FTG S EF D++DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 5.330e-135 Identity = 224/441 (50.79%), Postives = 284/441 (64.40%), Query Frame = 1
Query: 112 GRMYLEDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESD--ETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSD--GRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLE---FNDATDTAWSSNTFEDADGDLCYK 1413
G+ Y+ GGC T+TD+Y ++ G GP+++LD +D+++ S TG WLL ++ V GS+ G GGD LRIQSTGS D++E+RGHGGSL F T VTSWDT K +Y+ RSF+ CVSE +D +TCDG N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA +GGE A GIFLHRSSD CEV+ N +YDM+DAG+AI+ES A IHDNTFTNVKYGIR+S+G N V +N F EC QYG+YTYQG+D+PEAS D G +N+F+ N + E GVKI++A+ + T N F S E F D D W++N D D+C K
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLK 827
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 381 bits (978), Expect = 1.750e-124 Identity = 220/464 (47.41%), Postives = 272/464 (58.62%), Query Frame = 1
Query: 79 SIRWASGTGLNGRMYLED-------GGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATDTAWSSNTFED-------ADGDLCY 1410
SIR+A G R+YLE GGC T+ ++ SR KGP+Y +D D + TS TG WLLT EL+V G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT SP ED DGRS+++ +SE + DETC+G KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G E +AGIFLHRSSD V N ++D DAGLA+LESF+AD+ +NTF N KYG+R S+G +N +N ++Y Y+Y G+DEP+ S GR N F N S E +KIKEAD T N F G + ++ F++AT+ NT D D D C+
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNV--STSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 496
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 376 bits (966), Expect = 1.270e-122 Identity = 221/463 (47.73%), Postives = 276/463 (59.61%), Query Frame = 1
Query: 28 SPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLED------GGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGENAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATDTAWSSNT 1380
SP ++ PD + + SIR+A G R+YLE GGC T+ ++ SR K P+Y +D D + S T TG WLLT EL+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP ED DGRS+++ VSE + DETC+G KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G E +AGIFLHRSSD V N ++D DAGLA+LESF+AD+ +NTF N KYG+R+S+G +N +N+ S+Y YTY GSDEP+ S GR N F N S E +KIKEAD T N F G + ++ F+DA ++ NT
Sbjct: 33 SPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDV-SETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig715.18366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig715.18366.1 >prot_F-serratus_M_contig715.18366.1 ID=prot_F-serratus_M_contig715.18366.1|Name=mRNA_F-serratus_M_contig715.18366.1|organism=Fucus serratus male|type=polypeptide|length=470bp MPVSSPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLEDGGCGTMTDLYMback to top mRNA from alignment at F-serratus_M_contig715:388976..391663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig715.18366.1 ID=mRNA_F-serratus_M_contig715.18366.1|Name=mRNA_F-serratus_M_contig715.18366.1|organism=Fucus serratus male|type=mRNA|length=2688bp|location=Sequence derived from alignment at F-serratus_M_contig715:388976..391663+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig715:388976..391663+ >mRNA_F-serratus_M_contig715.18366.1 ID=mRNA_F-serratus_M_contig715.18366.1|Name=mRNA_F-serratus_M_contig715.18366.1|organism=Fucus serratus male|type=CDS|length=2820bp|location=Sequence derived from alignment at F-serratus_M_contig715:388976..391663+ (Fucus serratus male)back to top |