mRNA_F-serratus_M_contig7.18142.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7.18142.1
Unique NamemRNA_F-serratus_M_contig7.18142.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 6.140e-141
Identity = 250/351 (71.23%), Postives = 276/351 (78.63%), Query Frame = 2
Query:  278 DALLELLSFLPHKEAQRILGTPLSKVYISSFTFDENIWKARCVGQWKIPALTSSQKWRTLHVDLVRCLTLVDGTARNF--HGDYHNVVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTGDGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQHDTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVRAMDNHPSDALLCQCAIGTLRRL 1324
            DALLELLSFLPH EAQR L  PLSKVY+SSFT +ENIWKARCV QWK+P  T+   WRTLH+DLV CL+LVDGTA      GDY NVVAI  VLD YRTLAE+ RACF RLG LL S EAREA K VDWRIMDHALW LKTYPDDVDL LK+L FLV+AGRP GR EG ++  PPA D  L AFGP+G+GV+AVLACMER +SNA VQA+ACWS+VNLALI  QK+SL   GG  XXXXXXXXXXXXXXXXXXXXXXXXX           IQ DTMKA+  +VVSAIQ FSN+  IVNR CLVL+NIALDPGH  ALV+IGAPEEL+ A+  HP+DALL QCA GTLRRL
Sbjct:   28 DALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVEQWKVPPNTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGDYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 378          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: F0Y6I8_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I8_AURAN)

HSP 1 Score: 96.7 bits (239), Expect = 2.620e-17
Identity = 125/378 (33.07%), Postives = 176/378 (46.56%), Query Frame = 2
Query:  248 SPAHDYSFPADALLELLSFLPHKEAQRILGTPLSKVYISSFTFDENIWKARCV-GQWKIPALT----SSQKWRTLHVDLVRCLTLVDGTARNFHGDYHNVVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTGDGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQHDTM---KALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKVGGVLNDRAD 1357
            SP        D ++ +L FL   E       P+ + +      +  +W   C    W +   T    S  + R LH  ++   +   G +         V  ++ ++  +  +A + R C   L   L    AR+A  A++ R+    +  L  +    +LQ+  LH +V   RPIG  EG +     A    L AF     G+ AVLA M    S  +VQAM CWS+VNLAL   QK  L+   G   XXXXXXXXXXXXXXXXXXXXXXXX              D     K +   V+ A+  F +   +V  GCLVL+N++LD G+   L++ G    L RA  +H  DA + + A+ TLRRL  G VL+ R D
Sbjct:   86 SPDAYIELTPDMVIVVLGFLDAPERHAAASPPICRQHRDRVRENREVWIQLCAEAPWHVARPTLEGRSVPELRRLHRSVLDASSRARGAS---------VDDVSRIMRAHEDVAGVQRRCLETLAERLHCERARKA--ALEARVTAQVVAALWAFLPAAELQVVALHCVVFLARPIGGAEGMVFHRGMA-SQGLDAFLGKRGGIAAVLASMRAHGSVDSVQAMGCWSLVNLALNHQQKLELLKLRGLDRXXXXXXXXXXXXXXXXXXXXXXXXLVIPEAGALYEDDLDLKAANKRVVRYVLGAMAAFPDSEKLVRCGCLVLHNLSLDDGNVPHLLAAGVSLPLQRAARHH-KDADVQRSAVSTLRRL--GIVLHLRRD 448          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.780e-16
Identity = 95/361 (26.32%), Postives = 142/361 (39.34%), Query Frame = 2
Query:  278 DALLELLSFLPHKEAQRILGTPLSKVYISSFTFDENIWKARCVGQ-WKIPALTSSQK----WRTLHVDLVRCLTLVDGTARNFHGDYHNVVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTGDGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQHDTMKALATM-----VVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKV 1330
            D +L +L +L  K   R    P  +      T +  +W   C    W+I       +     R LH  +V     VD            +  IA ++  +  +A +   CF  L   L     R+   A+D  +    +  L  + +  D+Q+  LH +V   RPIG  EG +     A    L AF     G+ AVL  M     N+ VQAM CWS+VNLAL   QK +L+   G                                         D  +  A       V++A++ F     +V  GCLVL+N++LD  +   L++ G    L RA  +H  DA + + A+ TLRRL+V
Sbjct:  106 DLMLYVLGYLDPKARHRAAANPACRQLRDRVTKNREVWAHLCSSTPWRIHRSDLEHRPVNALRRLHRTVVEATDSVDTAP---------IADIARIMSDHARVAGVQVRCFRTLADRLHCETFRK--NALDCGVASSVVRALWKFDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMA-SRGLDAFLGESGGIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEAGSVSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSH-KDADVQRSAVSTLRRLRV 453          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO)

HSP 1 Score: 94.0 bits (232), Expect = 6.770e-16
Identity = 88/330 (26.67%), Postives = 146/330 (44.24%), Query Frame = 2
Query:  536 AIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFG-PTGDGVKAVLACM----ERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------IQHDTMKALAT----MVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALV-SIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKVGGVLNDRADILGAAFGMAQPAQAV*V---EADYITSAQDKNSKHQQLD 1465
            +I N +  +  +  I   C   L  ++E+   R A +     + ++ L  +  +PD   L     H +V+  RP+G  EG L  +     S++   G PT  G K+ +A M    +RF+ +  +QAM+CWS+VN+AL   QK+ L+  GG                                              + + + A+      +VV+A++ F +  AI+NR CLVL+NI+L   +  AL+ +    + L   + N+ SD +L Q A GTL RL+V    ++R     AA   AQ   ++     EA Y+   Q++ S+  Q D
Sbjct:  686 SIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQRAG--LTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRLQVTLSNDERLRQRFAASIQAQQQHSLEEAHREAVYLRDQQERLSQRNQSD 1013          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 9.670e-16
Identity = 83/310 (26.77%), Postives = 133/310 (42.90%), Query Frame = 2
Query:  530 VVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTG-----DGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQ-HDT--------------MKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVR-AMDNHPSDALLCQCAIGTLRRLKVGGVLNDRADILGAAFGMAQPAQ 1396
            + +I N +  + ++  I   C   L  LLE  + R   +     + D  L  +  +P  V L     H +V+  RP+G  EG L  +     S + + G  G      G+  +L  M RF+S A +QAM+CWS+VN+AL   QK+ L+  GG                                      +   DT              ++ +  +VV A++ + +  AI+NR CLVL+N++L PG+   L+ I    +++   + N+ +D +L Q A GTL RL+     ND    L A F  +  AQ
Sbjct:  854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQRMTAQRAG--LTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRLQATLGSNDS---LRARFTASLQAQ 1158          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A7S3JW95_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW95_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.110e-15
Identity = 91/389 (23.39%), Postives = 159/389 (40.87%), Query Frame = 2
Query:  245 SSPAHDYSFPADALLELLSFLPHKEAQRILGTPLSKVYISSFTFDENIWKARCVGQ-WKIP-------ALTSSQKWRTLHVDLVRCLTLVDGTARNFHGDYHNVVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPAC----DSALGAFGPTGDGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQHDTMKA---------------LATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKV 1330
            ++PA       + ++ +L +LP  E               +   + NIW   C  + W++          +++ ++R LH +L+  + +    AR   GD   V  +AN++  ++ +  +   C  RL + L     R+  +A+D ++    ++ L+ Y  + +LQ   LH +V   RPIG  EG +      C     + L AF     G+  VL  M+   S++ VQA+ CWS+VNLAL   QK  ++   G                                       Q+D                   +   V+ A+  F +   ++  GCLVL+N++L P +   L +    + L+RA   H +D  + + AI TLRRL +
Sbjct:  104 NAPAALIELAPELVVHILEYLPVNERXXXXXXXXXXXXAHNVRENINIWFPLCTAKPWQMSWSDLEERGYSTASEFRELHTNLIHAIDI----ARR--GD---VAQVANIMKEFQDVIGLQYECLERLIIALHCERVRK--RAIDAKLASCVIYILQRYSHNTELQSMALHCIVFLARPIGGAEGMVF-----CRGVHSNGLEAF--LYGGIDIVLDAMKNHISSSVVQAVGCWSLVNLALNRQQKIDILTKNGIQCIIRAMQIHPHCLDVQFRALFALINLVIPENVQQQFNQNDPHNTNTNNTFLPQDTISHDILDHVLIAMDRFGDSDKLIRCGCLVLHNLSLRPTNIPILQANNTSKPLLRAARTH-NDHDVQRSAISTLRRLGI 473          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC)

HSP 1 Score: 90.1 bits (222), Expect = 1.070e-14
Identity = 79/305 (25.90%), Postives = 129/305 (42.30%), Query Frame = 2
Query:  530 VVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTGD-----GVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQ----------HDTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVR-AMDNHPSDALLCQCAIGTLRRLKVGGVLNDRADILGAAFGMAQPAQ 1396
            + +I N +  +  +  I   C   L  LLE  + R   +     + D  L  + T+PD   L     H +V+  RP+G  EG L  T     S + +           G+  +L  M+RFQ +  +QAM+CWS+VN+AL   QK+ L+  GG                                      ++           +++  +  +V+ A++ F    AIVNR CLVL+N++L   +   L+      +++   + N+P+D +L Q A GTL RL++   LN   +IL   F     AQ
Sbjct:  726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQRAG--LTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRLQL--TLNSD-EILRTRFATTLQAQ 1025          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.750e-14
Identity = 78/297 (26.26%), Postives = 120/297 (40.40%), Query Frame = 2
Query:  530 VVAIANVLDTYRTLAEIARACFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTG--DGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQH---------------------DTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALV-SIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKVGGVLND 1348
            + +I N +  +  +  I   C   L  LLE    R  T A    +    L  +  +PD V L     H +V+  RP+G  EG L  +     S +   G  G  +G+  +L  M RF S   +QAM+CWS+VN+AL   QK  L+  GG                                                              + +  +A +VV A++ F +   I+NR CLVL+N++L   +   L+ +    + L   + N+PSD +L QCA GTL RL++    +D
Sbjct:  355 IYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQR--TTAQRAGLTGIVLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRLQMTLASDD 649          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.400e-14
Identity = 87/313 (27.80%), Postives = 132/313 (42.17%), Query Frame = 2
Query:  590 CFGRLGLLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGP---TG-DGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------IQHDTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALV-SIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKVGGVLNDRADILGAAFGMAQPAQAV*V---EADYITSAQDK 1441
            C   L  LLE    R  T A    + D  L  +  +PD V+L     H LV+  RP+G  EG L  +  A  +A G F     TG +G+  +L  M RF  +  +QAM+CWSMVN+ALI  QK  L+  GG                                                           +  + +  +A +VV A++ F +  AI+NR CLVL+N++L+  +   L+ +    + L   + N+  D +L Q A GTL+RL+     ++   +  AA   AQ  +++     EA YI   Q +
Sbjct:    7 CLKVLPFLLEDENQR--TTAQRAGLTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHS--AMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRLQTTLANDEDLRMRFAASIRAQQQRSLEQARREAIYIQEQQQQ 315          
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Match: A0A7S2LUU9_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LUU9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.510e-13
Identity = 67/249 (26.91%), Postives = 111/249 (44.58%), Query Frame = 2
Query:  608 LLLESHEAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEGTLLPTPPACDSALGAFGPTG-DGVKAVLACMERFQSNATVQAMACWSMVNLALITDQKKSLIVHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------IQHDTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNALVSIGAPEELVR-AMDNHPSDALLCQCAIGTLRRL 1324
            LLLE    R   +     + D  L  +  +PDDVDL     H LV+  RP+G  EG+L          + + G    +G+  +L  M RF SN  +QAM CW++VN+AL++DQ+  L+  GG                                              I  D ++++A +++ A++   +   I++R CLVL N++    + N L+      E++   MD++  + L+ +CA  TL+RL
Sbjct:  595 LLLEDENQRAIAQRNG--LTDAILQEMAIFPDDVDLNAAAFHALVLLARPLGGKEGSLFQGSMINSDIMVSGGHENQNGIAIMLNAMRRFDSNELLQAMGCWAIVNIALVSDQRTMLLRLGGLSVVTNAMRRHPYDIEVQLRAVSALVNLVKPFDSKRSANGENLERQILDDMVESIADLIIQAMKNCCSHEVILSRACLVLGNLSFRKNYKNTLLETPECCEMLEWCMDSYEDNKLIQRCAKDTLQRL 841          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JC51_9PHAE6.140e-14171.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0Y6I8_AURAN2.620e-1733.07Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3ZUP6_9STRA2.780e-1626.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5JKA1_FISSO6.770e-1626.67Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3LG40_9STRA9.670e-1626.77Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3JW95_9STRA2.110e-1523.39Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B7FR68_PHATC1.070e-1425.90Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6T9YI25_9STRA1.750e-1426.26Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S2MKG5_9STRA9.400e-1427.80Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2LUU9_9STRA1.510e-1326.91Kinesin-like protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1139006..1143346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.2
Seed ortholog evalue2.7e-118
Seed eggNOG ortholog2880.D7FLC7
Hectar predicted targeting categoryother localisation
EggNOG OGs2C8IF@1,2S3J3@2759
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-12_007670.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2496
Cds size1230
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18142.1prot_F-serratus_M_contig7.18142.1Fucus serratus malepolypeptideF-serratus_M_contig7 1139653..1142255 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932142.967885-UTR-F-serratus_M_contig7:1139005..11390631622932142.967885-UTR-F-serratus_M_contig7:1139005..1139063Fucus serratus maleUTRF-serratus_M_contig7 1139006..1139063 +
1690964168.6607306-UTR-F-serratus_M_contig7:1139005..11390631690964168.6607306-UTR-F-serratus_M_contig7:1139005..1139063Fucus serratus maleUTRF-serratus_M_contig7 1139006..1139063 +
1622932143.0004454-UTR-F-serratus_M_contig7:1139535..11396521622932143.0004454-UTR-F-serratus_M_contig7:1139535..1139652Fucus serratus maleUTRF-serratus_M_contig7 1139536..1139652 +
1690964168.6750429-UTR-F-serratus_M_contig7:1139535..11396521690964168.6750429-UTR-F-serratus_M_contig7:1139535..1139652Fucus serratus maleUTRF-serratus_M_contig7 1139536..1139652 +
1622932143.1197133-UTR-F-serratus_M_contig7:1142255..11433461622932143.1197133-UTR-F-serratus_M_contig7:1142255..1143346Fucus serratus maleUTRF-serratus_M_contig7 1142256..1143346 +
1690964168.750766-UTR-F-serratus_M_contig7:1142255..11433461690964168.750766-UTR-F-serratus_M_contig7:1142255..1143346Fucus serratus maleUTRF-serratus_M_contig7 1142256..1143346 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932143.0189064-CDS-F-serratus_M_contig7:1139652..11397961622932143.0189064-CDS-F-serratus_M_contig7:1139652..1139796Fucus serratus maleCDSF-serratus_M_contig7 1139653..1139796 +
1690964168.6908948-CDS-F-serratus_M_contig7:1139652..11397961690964168.6908948-CDS-F-serratus_M_contig7:1139652..1139796Fucus serratus maleCDSF-serratus_M_contig7 1139653..1139796 +
1622932143.0642633-CDS-F-serratus_M_contig7:1140073..11401361622932143.0642633-CDS-F-serratus_M_contig7:1140073..1140136Fucus serratus maleCDSF-serratus_M_contig7 1140074..1140136 +
1690964168.7057612-CDS-F-serratus_M_contig7:1140073..11401361690964168.7057612-CDS-F-serratus_M_contig7:1140073..1140136Fucus serratus maleCDSF-serratus_M_contig7 1140074..1140136 +
1622932143.0789924-CDS-F-serratus_M_contig7:1140820..11411591622932143.0789924-CDS-F-serratus_M_contig7:1140820..1141159Fucus serratus maleCDSF-serratus_M_contig7 1140821..1141159 +
1690964168.7175186-CDS-F-serratus_M_contig7:1140820..11411591690964168.7175186-CDS-F-serratus_M_contig7:1140820..1141159Fucus serratus maleCDSF-serratus_M_contig7 1140821..1141159 +
1622932143.0940578-CDS-F-serratus_M_contig7:1141402..11417861622932143.0940578-CDS-F-serratus_M_contig7:1141402..1141786Fucus serratus maleCDSF-serratus_M_contig7 1141403..1141786 +
1690964168.728465-CDS-F-serratus_M_contig7:1141402..11417861690964168.728465-CDS-F-serratus_M_contig7:1141402..1141786Fucus serratus maleCDSF-serratus_M_contig7 1141403..1141786 +
1622932143.108043-CDS-F-serratus_M_contig7:1141955..11422551622932143.108043-CDS-F-serratus_M_contig7:1141955..1142255Fucus serratus maleCDSF-serratus_M_contig7 1141956..1142255 +
1690964168.7397292-CDS-F-serratus_M_contig7:1141955..11422551690964168.7397292-CDS-F-serratus_M_contig7:1141955..1142255Fucus serratus maleCDSF-serratus_M_contig7 1141956..1142255 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7.18142.1

>prot_F-serratus_M_contig7.18142.1 ID=prot_F-serratus_M_contig7.18142.1|Name=mRNA_F-serratus_M_contig7.18142.1|organism=Fucus serratus male|type=polypeptide|length=410bp
MALANILSIPAAGIMRGAGDFDVSSPAHDYSFPADALLELLSFLPHKEAQ
RILGTPLSKVYISSFTFDENIWKARCVGQWKIPALTSSQKWRTLHVDLVR
CLTLVDGTARNFHGDYHNVVAIANVLDTYRTLAEIARACFGRLGLLLESH
EAREATKAVDWRIMDHALWTLKTYPDDVDLQLKVLHFLVMAGRPIGRTEG
TLLPTPPACDSALGAFGPTGDGVKAVLACMERFQSNATVQAMACWSMVNL
ALITDQKKSLIVHGGISAIVEAMVRHPRNSEVHFRAMFALINLVTPDMTA
EKIIQHDTMKALATMVVSAIQMFSNVAAIVNRGCLVLYNIALDPGHFNAL
VSIGAPEELVRAMDNHPSDALLCQCAIGTLRRLKVGGVLNDRADILGAAF
GMAQPAQAV*
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mRNA from alignment at F-serratus_M_contig7:1139006..1143346+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7.18142.1 ID=mRNA_F-serratus_M_contig7.18142.1|Name=mRNA_F-serratus_M_contig7.18142.1|organism=Fucus serratus male|type=mRNA|length=4341bp|location=Sequence derived from alignment at F-serratus_M_contig7:1139006..1143346+ (Fucus serratus male)
CTGCACCTCCTACTCGAAGGACGTTCAGCTAAGCACTACAAAGGGTCTAC ATATTACGGTTGGTACTGTCCTTGATTGTGCCACCCGTGAACCTGTCAAA TCCAGTGAAAACAGCTCCTTGAAGTTCCACAACACGTGTCCTGTCGTAAG GTCTATCACGAATTCCAATTGATACCCGATACATACATACTGTACCCGAC GCTATTTTGTGAGGTTTGCATCTCTCTGAGCAATACCAACATGATATCTA CGATAAACGTTTGCGCTAGAGGTTCGATGTTCGCCGTCCTGCTGCCGTGA GTGAACTGCGAAAAGTACAAATAGCTACAGCAGTAAATATATTTGGGCAC AAGATACAGACAGAGTACACACATACTTGTTTAAACACATACTGCTGAAC AAGAAAAGGCCCAGCTGTACTCTCCACATGGACATTACTACAATTCATTA CTCTGACTGATTGATCTCTTATGTTTTTTTCTCTCTTTTCGCCATGTATA CTTCTGCGATCTTGGGCTACATCGCGTCAGCTTGGTTTGAACCAACGTCG CTTCATAAATTGCCTTGAGGAGTAAGCCGGGTTGGTTGGGTGTTGGGTAT AAAATCATCAACCTGTTCTCGACACGTTTCACCATTACTCGGCAACGATG GCGCTGGCCAACATCTTGTCCATCCCCGCGGCTGGAATAATGCGCGGGGC TGGCGATTTCGATGTCAGCAGCCCCGCGCATGACTATTCATTCCCCGCCG ATGCTCTGTTGGAACTACTTTCCTTCCTGCCGCATAAAGAGGTGCGGGAG CGAACACAGTAGCACGTCGCGTAGCACGCCGCTAGAGCCGAGGGTGCACC AAGATTTCAGCATGTTGCTTCTTGTAGCAGTTCGCCTCTACTGTACAGTA ATATTGCGTCTGCTCTATTAGTACTGCTTTCAGCAAGGAAGAGAGCTTCT GGTACGAACGATATTGCGGACAGACAAAGAACTCGCTGCTGTTGTTACCA TAGTTCCCGTGCCAGTGTTACATTCTGATTTTTCGTGCATGCCCAACCCT TTCGGGACCTGCGCGCAGGCCCAAAGGATCCTGGGGACACCTTTGTCCAA GGTATACATCTCGAGCTTCACTTTTGATGAAGTAAGTACATACTATACAC AGTACAACATTTCAACAGCTAAATGCAAGTGCAAGCCTCCTCGAATTTTG TGTTAGTGCTATAATTCTGGTATAATTCTGGTGCACTGCTGTACTACTAC TGTAGTATCCGTGATACTGAGTGTATGTACTATTTATTATATTGAACCAT CGCCTTTACGCGTATCAGGCGTACACTCTACCACTGAGCATAGTTACAGG CCCTAGGGTTGTATCGGGCAAAAAACCCTTTTAACTACACTATATCAGGC TAAACAAATTCAATATTGACGACTTCCAGAAGTTCTGCGTGGTAATAATG GAAACGCTAGACCTCTGTTCTTAACCCAAGGGTTTGCCTTACTGTACTGT ATACCATACTCTTGTATTTGGCTCATGGTCGCGCTTTTAGCTTTTACGAG TCTTCGCGATTATACATAGCtctatacgaAGTATTATTTTGCTTGAATCC CTCCTACTTTATTCTGCTTTACTTTATTGTATTGAAGAAAAATGTGTATT GTTTGAAGAAAAAACAAATTAATGGCGTCGACTGGAAACCTTGAATTGTG TACTATCATGTTACCTGGTATATATTATTAGACTGCTTTTTTCTTACTCA TGGGCAAAATGTGTAATGGTCACGACGTCAGCTAAAACTCTGCTGGCTCT ATTTATTCTTCGCAGAATATATGGAAAGCGAGATGCGTCGGGCAGTGGAA AATTCCAGCCTTAACTTCATCTCAGAAGTGGCGCACTCTCCACGTGGATC TGGTCCGCTGCCTCACACTTGTAGACGGTACGGCCCGTAACTTTCATGGC GATTACCACAACGTGGTCGCGATCGCGAACGTGTTGGATACTTACCGCAC GCTAGCCGAGATCGCCCGAGCTTGCTTCGGCCGTCTTGGGCTGCTCCTGG AAAGCCATGAAGCTCGAGAAGCCACCAAGGCCGTCGATTGGCGCATCATG GATCACGCCCTGTGGACTCTCAAGACTTACCCGGACGATGTCGACCTACA GCTGGTTTGTGGTTCGGCATTCCTCAACCGCATGCATAGAACAATGTGTC TCGCTGGTGTGCTGCTTTCCAGGCACACATTGTCTGTTGAGAAATGTTTT GGACGTATCGAGCTCTGTGCACTTATGTCTCTCTTTGCTTTTCTAGTAAT AGACCGTCTTGCCCTATGAGTAACACAGGAGGATTTTGGGGATTTTTCCC CTTCGTCTGAAAAACTCAACCGATTCGTGATCGTACGGCGCGCGCAGAAA GTTCTCCACTTCCTGGTGATGGCTGGACGTCCGATTGGTCGCACGGAGGG AACACTACTGCCTACACCCCCGGCCTGCGATAGTGCCCTAGGAGCCTTCG GACCAACAGGAGATGGTGTTAAAGCAGTGTTGGCGTGTATGGAGCGATTC CAATCCAACGCTACTGTGCAAGCTATGGCGTGCTGGAGCATGGTAAACCT TGCGCTCATCACGGATCAGAAGAAATCACTCATTGTCCACGGTGGAATCT CGGCCATAGTTGAGGCTATGGTTAGACACCCTCGAAACAGTGAGGTTCAC TTTCGGGCCATGTTCGCTCTCATTAACCTGGTTACCCCAGATATGACGGC GGAGAAGATCATCCAGCATGATACTATGAAGGTGAAATTATGAGATCAAG GCAATGCCATTGGGTGACAGAGTGGGACTAAAGGCTCCTTGGGATAGTCA CTAGCGCGAAATTCTTGCTGTGCAAAAAAATAATCAATGCTCTATTTTCC CATCGAGTTTGATCCAAACACCTTTTCTCGCATATAATTTTGAAACCCAG GCGTTGGCTACCATGGTGGTATCTGCGATCCAAATGTTCTCCAATGTGGC GGCCATAGTCAATCGTGGATGCCTCGTCCTGTACAACATCGCCCTCGATC CGGGACACTTCAATGCTCTTGTGTCTATTGGAGCTCCGGAGGAGCTCGTT CGCGCGATGGACAACCACCCTTCGGATGCGCTGCTGTGTCAGTGCGCGAT TGGAACTCTGCGGCGCCTCAAAGTCGGTGGGGTTCTTAACGATAGGGCGG ATATTCTCGGTGCGGCCTTTGGTATGGCTCAACCTGCCCAGGCCGTGTAG GTCGAAGCCGACTACATCACGAGTGCGCAAGACAAAAACAGCAAACATCA GCAGTTAGACTAATAGTGCCCTCGTATAGCGATTTCCCCGGGAGTGTACC GATCGAGATAAACATCGATACGTAGGTGGTACACAAGGGTCGCAAAGGGT GTTTTCGCCCTTTTGCCGTCACAAACACAGCGACGCCGTACGGGTGCGTG CCCTGCTCTCGGTCGTGTCATGTATAAAGAAATAAACAAGGTATATATAT CTCCATAGGGGTGTTGAACGCCCAACTCTTTGGGAAAAGGCCTTAAGGTG CAGGAATTTATAGAAAAAGGAGAGTGCGCTCAAGTGTCGCAGGCGAACCG TGTTTCCATGTTTCTATCTTAGATCTTACAATCGTCTCCCTAGTTGAGAG CGGAAACCCTTGAGCAGTCGGAGCGAACGAAGGAGCTGATGCGTTCGATC AAAATTGCTTGATAGTAAAACGAAAATCAGGAAACCCTGCGAAGGGTGCG AGAGCGCCAAATCACATGCGCGCGCTGTCTGTGGCGGGGGTGTCCTCTGT TCCAGTTGTGCAGCAACCGCCGCTTGGTCTCGATTAGTAGAGGAAGAGCC GCAATGCACAGAAAAATAGAATTTGATACGGAGAGACCGAGTTAAAGTGG TAATTACGCTATTACTGTACATGTATTGGGATGATTGTGGTTGTTGCCAG CGAACTTTGAACGTAGTCTGTTGTGGCATCGGTAAATAAGCGAACTGAGT GTGCGCTTAAGGGGCCGTCAGCGCTTCGACGGGGAGAATATAAAGGCGTA GGTCACACTGCAGTTTAAATTAGGTGTCATGGTTCAAGATTGATAGTAAC CACATCCGATTGTGCCCATGGATGCGCTACAATGGAATTGGCGAAAAAAA ATATCTGGCAGCAAGCCACTTACACTGCACCAAGAAAGAAGCGCGTAATT TCGTTTAAAGAAAAATCTGAACGCATCCAAACCTTCTGAGAATCCACCCG ACGAGGGAAGGGAAATGTCAAAACGTTTAGGTGATAACATAGGCTGTAAG GCCGACTCTTATGCATACGAAAAACTTATACGAAAATGGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig7:1139006..1143346+

>mRNA_F-serratus_M_contig7.18142.1 ID=mRNA_F-serratus_M_contig7.18142.1|Name=mRNA_F-serratus_M_contig7.18142.1|organism=Fucus serratus male|type=CDS|length=2460bp|location=Sequence derived from alignment at F-serratus_M_contig7:1139006..1143346+ (Fucus serratus male)
ATGGCGCTGGCCAACATCTTGTCCATCCCCGCGGCTGGAATAATGCGCGG
GGCTGGCGATTTCGATGTCAGCAGCCCCGCGCATGACTATTCATTCCCCG
CCGATGCTCTGTTGGAACTACTTTCCTTCCTGCCGCATAAAGAGATGGCG
CTGGCCAACATCTTGTCCATCCCCGCGGCTGGAATAATGCGCGGGGCTGG
CGATTTCGATGTCAGCAGCCCCGCGCATGACTATTCATTCCCCGCCGATG
CTCTGTTGGAACTACTTTCCTTCCTGCCGCATAAAGAGGCCCAAAGGATC
CTGGGGACACCTTTGTCCAAGGTATACATCTCGAGCTTCACTTTTGATGA
AGCCCAAAGGATCCTGGGGACACCTTTGTCCAAGGTATACATCTCGAGCT
TCACTTTTGATGAAAATATATGGAAAGCGAGATGCGTCGGGCAGTGGAAA
ATTCCAGCCTTAACTTCATCTCAGAAGTGGCGCACTCTCCACGTGGATCT
GGTCCGCTGCCTCACACTTGTAGACGGTACGGCCCGTAACTTTCATGGCG
ATTACCACAACGTGGTCGCGATCGCGAACGTGTTGGATACTTACCGCACG
CTAGCCGAGATCGCCCGAGCTTGCTTCGGCCGTCTTGGGCTGCTCCTGGA
AAGCCATGAAGCTCGAGAAGCCACCAAGGCCGTCGATTGGCGCATCATGG
ATCACGCCCTGTGGACTCTCAAGACTTACCCGGACGATGTCGACCTACAG
CTGAATATATGGAAAGCGAGATGCGTCGGGCAGTGGAAAATTCCAGCCTT
AACTTCATCTCAGAAGTGGCGCACTCTCCACGTGGATCTGGTCCGCTGCC
TCACACTTGTAGACGGTACGGCCCGTAACTTTCATGGCGATTACCACAAC
GTGGTCGCGATCGCGAACGTGTTGGATACTTACCGCACGCTAGCCGAGAT
CGCCCGAGCTTGCTTCGGCCGTCTTGGGCTGCTCCTGGAAAGCCATGAAG
CTCGAGAAGCCACCAAGGCCGTCGATTGGCGCATCATGGATCACGCCCTG
TGGACTCTCAAGACTTACCCGGACGATGTCGACCTACAGCTGAAAGTTCT
CCACTTCCTGGTGATGGCTGGACGTCCGATTGGTCGCACGGAGGGAACAC
TACTGCCTACACCCCCGGCCTGCGATAGTGCCCTAGGAGCCTTCGGACCA
ACAGGAGATGGTGTTAAAGCAGTGTTGGCGTGTATGGAGCGATTCCAATC
CAACGCTACTGTGCAAGCTATGGCGTGCTGGAGCATGGTAAACCTTGCGC
TCATCACGGATCAGAAGAAATCACTCATTGTCCACGGTGGAATCTCGGCC
ATAGTTGAGGCTATGGTTAGACACCCTCGAAACAGTGAGGTTCACTTTCG
GGCCATGTTCGCTCTCATTAACCTGGTTACCCCAGATATGACGGCGGAGA
AGATCATCCAGCATGATACTATGAAGAAAGTTCTCCACTTCCTGGTGATG
GCTGGACGTCCGATTGGTCGCACGGAGGGAACACTACTGCCTACACCCCC
GGCCTGCGATAGTGCCCTAGGAGCCTTCGGACCAACAGGAGATGGTGTTA
AAGCAGTGTTGGCGTGTATGGAGCGATTCCAATCCAACGCTACTGTGCAA
GCTATGGCGTGCTGGAGCATGGTAAACCTTGCGCTCATCACGGATCAGAA
GAAATCACTCATTGTCCACGGTGGAATCTCGGCCATAGTTGAGGCTATGG
TTAGACACCCTCGAAACAGTGAGGTTCACTTTCGGGCCATGTTCGCTCTC
ATTAACCTGGTTACCCCAGATATGACGGCGGAGAAGATCATCCAGCATGA
TACTATGAAGGCGTTGGCTACCATGGTGGTATCTGCGATCCAAATGTTCT
CCAATGTGGCGGCCATAGTCAATCGTGGATGCCTCGTCCTGTACAACATC
GCCCTCGATCCGGGACACTTCAATGCTCTTGTGTCTATTGGAGCTCCGGA
GGAGCTCGTTCGCGCGATGGACAACCACCCTTCGGATGCGCTGCTGTGTC
AGTGCGCGATTGGAACTCTGCGGCGCCTCAAAGTCGGTGGGGTTCTTAAC
GATAGGGCGGATATTCTCGGTGCGGCCTTTGGTATGGCTCAACCTGCCCA
GGCCGTGTAGGCGTTGGCTACCATGGTGGTATCTGCGATCCAAATGTTCT
CCAATGTGGCGGCCATAGTCAATCGTGGATGCCTCGTCCTGTACAACATC
GCCCTCGATCCGGGACACTTCAATGCTCTTGTGTCTATTGGAGCTCCGGA
GGAGCTCGTTCGCGCGATGGACAACCACCCTTCGGATGCGCTGCTGTGTC
AGTGCGCGATTGGAACTCTGCGGCGCCTCAAAGTCGGTGGGGTTCTTAAC
GATAGGGCGGATATTCTCGGTGCGGCCTTTGGTATGGCTCAACCTGCCCA
GGCCGTGTAG
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