mRNA_F-serratus_M_contig7.18137.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JN45_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN45_9PHAE) HSP 1 Score: 287 bits (735), Expect = 6.570e-91 Identity = 159/292 (54.45%), Postives = 200/292 (68.49%), Query Frame = 1
Query: 163 KMEALMMTMSQLVQGTAPTTGD----GQESRSGRHTAPGVDRGRIDHAPNTG-GVQDR--------PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
KME M +S+LV T P G G ESR G H +PG GR D APNTG GV+ PQ S S G+ +R+ + E A + ++R PRL+QLNFDG E NWPMFQN+F TQV CGM L DSRDI V G+ DE ++ QG++ EI Y+DLW ML GAI+D TTKM+VF +GP+AAWRAL FSPLTGGEQISL+GKFF+A+Q+ QDP F+ +F S VT+LE+AFDQPI KMLV+ RFL+ L ++++QKQQLL+QK+L+ EEI RVLR R+G
Sbjct: 43 KMEGFMDALSRLVPETPPAAGTAAGGGGESREGMHASPGA--GREDQAPNTGRGVEGARGGLLGPVPQE-STPSEGNVSRDGMNSEHRARYTTTSHARIPRLKQLNFDGHEKNWPMFQNEFTTQVQTCGMTRALTDSRDIVVQGVDDEGMVGQGVKFDEISMYRDLWGMLTGAISDNTTKMMVFGCKGPSAAWRALVETFSPLTGGEQISLMGKFFSARQEKKQDPPVFFQEFKSIVTSLEIAFDQPIPKMLVYTRFLDGLSIDFDVQKQQLLAQKTLDEEEILRVLRARSG 331
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KFW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW3_9PHAE) HSP 1 Score: 283 bits (724), Expect = 1.690e-89 Identity = 158/299 (52.84%), Postives = 202/299 (67.56%), Query Frame = 1
Query: 127 EEFATAIEDVSAKMEALMMTMSQLVQGTAPTTGDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
EE TAI+ +AKME++M GT ESR GRH PG GR++ AP TG G+ D PQ P+ S D +RE+ + A + + +R PRL+QLNFDG E NW MF+NDF+TQV CGMM L DSRDI + GM ++ ++EQG+ + Y+DLW MLVGAI+D TTK++V++ +GP+AAWRALE F+PLTGGEQISLIGKFF A+Q+ DP F+ QF STVT+LE A Q I KMLV+ARFL+AL EY++QKQQLLS++ LE EE+ RVLRTR G
Sbjct: 18 EEVKTAIDQANAKMESMMTEN----LGTVMEALSRGESRGGRHAPPGA--GRVNQAPITGKGLEGERGLPDTAPQGPTLPSARDVSRESETSDPPARYDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMPALNDSRDIEIQGMDEDGMIEQGVAAEGVHVYRDLWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGKFFTARQERNPDPQVFFQQFKSTVTSLEFALGQLIPKMLVYARFLDALSSEYDVQKQQLLSERILEEEEMLRVLRTRVG 310
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5L579_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L579_9PHAE) HSP 1 Score: 276 bits (706), Expect = 1.220e-86 Identity = 161/319 (50.47%), Postives = 206/319 (64.58%), Query Frame = 1
Query: 127 EEFATAIED------------VSAKMEALMMTMSQLVQGTAPTTGDGQESR------SGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
EE TAI+D V K+E +M ++S+LV G AP G G HT PG +HAP+TG G R +PS G +RE AH EQAA + ++R PRL+QL+FDG E NW MF+N+F TQV CGM L DSRDI V G+ D+ ++ QG++ EI Y+DLWV+L AI++ TK++VF +GP+AAWRALE FSPLTGGEQISL+ KFF+A+Q QDP F+ +F S VT+LELAF+QPI KMLV+ARFL+AL PE+E+QKQ LL+QK+L+ EEI RVLRTRAG
Sbjct: 19 EELRTAIDDAVGDASTRLERMVEEKLEGIMDSLSRLVPG-APPAGSATAXXXXXXXXGGAHTLPGAGCS-TEHAPSTGRGLEGARGLLGPAPREHTPS---EGGISREGAHSEQAAWYATYSHARIPRLKQLSFDGHEKNWLMFKNEFTTQVQTCGMDRALNDSRDIVVQGVDDDGMVRQGVRREEIAMYRDLWVLLTEAISESATKIMVFGCKGPSAAWRALEETFSPLTGGEQISLMAKFFDAQQGKNQDPRVFFQEFKSIVTSLELAFEQPIPKMLVYARFLDALSPEFELQKQLLLAQKTLDEEEILRVLRTRAG 332
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5K813_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K813_9PHAE) HSP 1 Score: 261 bits (666), Expect = 3.000e-82 Identity = 145/286 (50.70%), Postives = 188/286 (65.73%), Query Frame = 1
Query: 127 EEFATAIEDVSAKMEALMM--------TMSQLVQGTAPTT-----GDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYE 921
EE TAI+ +AKME++M +S+LV TA G ESR G H PG GR+D AP TG G+ D PQ P+ S GD +RE+ + A + + +R PRL+QLNFDG E NW MF+NDF+TQV CGMM L DS+DI + GM D+ ++EQG+ E+ Y++LW MLVGAI+D TTK++V++ +GP+AAWRALE F+PL GG+QISLIGKFF A+Q+ QDP F+ QF STVT+LE A QPI KMLV+ARFL+AL EY+
Sbjct: 18 EEVMTAIDQATAKMESMMTEKLGTVMEALSRLVPETASAASMAAAGGRGESRGGTHAPPGA--GRVDQAPITGQGLEGERGLPDTAPQGPTLPSAGDVSRESETSDPPARYDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMHALNDSQDIEIQGMDDDGMIEQGVAAEEVHVYRELWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLAGGKQISLIGKFFTARQERNQDPRVFFQQFKSTVTSLEFALGQPIPKMLVYARFLDALSSEYD 301
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KRJ2_9PHAE (eIF3g domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ2_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.340e-79 Identity = 149/297 (50.17%), Postives = 195/297 (65.66%), Query Frame = 1
Query: 154 VSAKMEALMMTMSQLVQGTAPT-----TGDGQESRSGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATREN-AHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRA 996
V+ KME +M T+ +LV G P G G ES H PG G++D A NT G + R SP G +RE + EQA+ + ++R RL+QL+FDG + NW MF+NDF+TQV CGM L D RDI V G+ D+ ++EQG+++ EI Y++LW ML GAI++ +TKM+V+ +GP+AAWR LE F+P T GEQISLIGKF+NA+Q QDP F+ +F S VT LELAFDQ I MLV+ARFL+AL PE+EIQKQQLL+QK+L+ +EI RVLRTRA
Sbjct: 107 VTEKMEGIMDTLPRLVPGAPPAGSATAAGGGGESLGRTHAFPGA--GQLDQASNTERGLEGARGLRGPEPREPSPP---EGAYSREGVSREEQASRYAFSSHARMSRLKQLDFDGDKKNWLMFRNDFITQVQTCGMGRALSDKRDIVVLGVDDDGMVEQGVEVGEIAMYRNLWGMLTGAISNISTKMLVYDRKGPSAAWRGLEETFTPSTRGEQISLIGKFYNAQQGKNQDPRVFFQEFQSVVTNLELAFDQRIHTMLVYARFLDALSPEFEIQKQQLLTQKTLDEKEILRVLRTRA 398
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JH27_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH27_9PHAE) HSP 1 Score: 263 bits (672), Expect = 7.200e-79 Identity = 155/312 (49.68%), Postives = 199/312 (63.78%), Query Frame = 1
Query: 127 EEFATAIEDVSAKMEALMM--------TMSQLVQGTAPT-----TGDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
EE TA+++ +A+ME++M +S+LV T P G G ESR GRH PG GR+D AP TG G+ D PQ P+ SVGD + ++A + A + +N+R PRL+QLNFDG+E NW MF+NDF TQV CGMM L DSRDI + G D+ ++EQG+ E+ Y+D+W MLVGAI+D TTK++V++ +GP+AAWRALE F+PLTGGEQISLIG LELA DQPI KMLV+ARFL+AL EY++QKQQLLS+K LE EE+ RVLRTRAG
Sbjct: 18 EELRTAVDEATARMESMMTEKLGTVMEALSRLVPETPPAGSTTGAGGGGESRGGRHAPPGA--GRVDQAPTTGQGLEGARGLPDTAPQGPTLPSVGDVSHDSATSDPPARYDPTMNARIPRLKQLNFDGQEKNWLMFKNDFTTQVQTCGMMHVLNDSRDIEIQGKDDDGMIEQGVAAEEVHVYRDVWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGN-------------------------LELARDQPIPKMLVYARFLDALSSEYDVQKQQLLSEKILEEEEMLRVLRTRAG 302
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JKA3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA3_9PHAE) HSP 1 Score: 231 bits (590), Expect = 2.080e-71 Identity = 137/292 (46.92%), Postives = 179/292 (61.30%), Query Frame = 1
Query: 127 EEFATAIEDVSAKMEALMM-TMSQLVQGTAPTTGDGQESRSGRHTAPGVDRGRIDHAPNTGGVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
EE TAI+ +AKME++M + ++Q +P + SR+G PQ P+ S GD RE+A + A + + ++ PRL+QLNFDG+E NW MF+NDF+TQV CGMM L DSRDI + GM D+ ++EQG+ E+ Y+DLW MLVGAI+D TTK++V++ +GP+AAWRALE +PLTGGEQISLIG LELA QPI KMLV+ARFL+AL EY++QKQQLLS+K LE EE+ RVLRTRAG
Sbjct: 18 EEVKTAIDQATAKMESMMTENVRAVMQALSPLVPE--TSRAGT-----------------------PQGPTLPSAGDVPRESATSDPRARYDPTMKAQIPRLKQLNFDGQEKNWLMFKNDFMTQVQTCGMMHALNDSRDIEIQGMGDDGMIEQGVAAEEVHVYRDLWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTVTPLTGGEQISLIGN-------------------------LELALGQPIPKMLVYARFLDALSSEYDVQKQQLLSEKILEQEEMLRVLRTRAG 259
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5L522_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L522_9PHAE) HSP 1 Score: 197 bits (502), Expect = 4.830e-58 Identity = 112/242 (46.28%), Postives = 145/242 (59.92%), Query Frame = 1
Query: 154 VSAKMEALMMTMSQLVQGTAPTTGDGQESR-----SGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTV 834
V K E +M ++S++V G P G H PG + HAP+TG G R +PS G +RE AH EQAA + ++R PRL+QL+FDG E NW MF+NDF TQV CGM L DSRDI V G+ D+ ++ QG++ EI Y+DLWV+L AI++ TK++VF +GP+AAWRALE FSPLTGGEQISL+ KFF+A+Q QDP FY +F S V
Sbjct: 40 VEEKSEGIMDSLSRVVPGAPPAGSXXXXXXXXXXXGGAHALPGAGF-LMGHAPSTGRGLEGARGLLGPAPREHTPS---EGGISREGAHSEQAAWYAIYSHARIPRLKQLSFDGHEKNWLMFKNDFTTQVQTCGMDRALNDSRDIVVQGVDDDGMVRQGVRREEIAMYRDLWVLLTEAISESATKIMVFGCKGPSAAWRALEETFSPLTGGEQISLMAKFFDAQQGKNQDPRVFYQEFKSIV 277
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5K5X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X4_9PHAE) HSP 1 Score: 192 bits (487), Expect = 2.720e-56 Identity = 108/222 (48.65%), Postives = 142/222 (63.96%), Query Frame = 1
Query: 163 KMEALMMTMSQLVQGTAPTT-----GDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKT 789
K+ +M +S+LV TA G ESR GRH P GR+D AP G G+ D PQ P+ S GD +RE+ + A + +R PRL+QLNFDG E NW MF+NDF+TQV CGMM L D RDI + GM D+ ++EQG+ + E+ Y+DL ML GAI+D TTK++V++ +GP+AAWRALE F+PLTGGEQISLIGKF+ K++T
Sbjct: 8 KLGTVMEALSRLVPETASAASMAAAGGRGESRGGRHAPPNA--GRVDQAPIIGQGLEGERGLPDTAPQGPTLPSAGDVSRESETSDPPARCDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMHALNDGRDIEIQGMDDDGMIEQGVAVEEVYVYRDLCGMLGGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGKFYTDKRET 227
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KRQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ4_9PHAE) HSP 1 Score: 134 bits (336), Expect = 6.500e-34 Identity = 82/173 (47.40%), Postives = 101/173 (58.38%), Query Frame = 1
Query: 163 KMEALMMTMSQLVQGTAPTTGD----GQESRSGRHTAPGVDRGRIDHAPNTG-GVQDR--------PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGA 642
KME M +S+LV T P G G ESR G H +PG GR D APNTG GV+ PQ S S G+ +R+ + E A + ++R PRL+ LNFDG E NWPMFQN+F TQV CGM L DSRDI V G+ DE ++ QG++ EI Y+DLW ML GA
Sbjct: 43 KMEGFMDALSRLVPETPPAAGTAAGGGGESREGMHASPGA--GREDQAPNTGRGVEGARGGLLGPVPQE-STPSEGNDSRDGMNSEHKARYTTTSHARIPRLKLLNFDGHEKNWPMFQNEFTTQVQTCGMTRALTDSRDIVVQGVDDEGMVGQGVKFDEISMYRDLWGMLTGA 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18137.1 >prot_F-serratus_M_contig7.18137.1 ID=prot_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=polypeptide|length=301bp MEASANVVSREEFATAIEDVSAKMEALMMTMSQLVQGTAPTTGDGQESRSback to top mRNA from alignment at F-serratus_M_contig7:794082..795080+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18137.1 ID=mRNA_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=mRNA|length=999bp|location=Sequence derived from alignment at F-serratus_M_contig7:794082..795080+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:794082..795080+ >mRNA_F-serratus_M_contig7.18137.1 ID=mRNA_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig7:794082..795080+ (Fucus serratus male)back to top |