mRNA_F-serratus_M_contig1239.1810.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1239.1810.1
Unique NamemRNA_F-serratus_M_contig1239.1810.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 7.440e-116
Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 1 
Query:    4 AESKTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIVTG 519
            AE KTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDF+VVLNRPGYRVAKRK K AKIGYQHKVTKTDAVKWFQAKFEGIVTG
Sbjct:    2 AEIKTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0D3AUD9_BRAOL (Uncharacterized protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AUD9_BRAOL)

HSP 1 Score: 280 bits (717), Expect = 1.740e-93
Identity = 133/166 (80.12%), Postives = 154/166 (92.77%), Query Frame = 1 
Query:   16 TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            +NPMRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    8 SNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0J8BKL6_BETVV (Uncharacterized protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0J8BKL6_BETVV)

HSP 1 Score: 280 bits (717), Expect = 1.740e-93
Identity = 133/166 (80.12%), Postives = 154/166 (92.77%), Query Frame = 1 
Query:   16 TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            +NPMRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PVYSKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    8 SNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0K9NLH5_ZOSMR (60S ribosomal protein L11a n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NLH5_ZOSMR)

HSP 1 Score: 280 bits (715), Expect = 3.270e-93
Identity = 134/171 (78.36%), Postives = 157/171 (91.81%), Query Frame = 1 
Query:    4 AESK-TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            AE K +NPMR++KV KLVLN SVGESGDRLTRA+KVLEQL+GQSPV+SKAR+TVRSFGIRRNEKIACHVTVRG+KA++++E GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    2 AERKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARFTVRSFGIRRNEKIACHVTVRGEKAMQLIESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRAKARVGIQHRVTKDDAMKWFQVKYEGVI 172
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A1S4CT55_TOBAC (60S ribosomal protein L11-1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CT55_TOBAC)

HSP 1 Score: 280 bits (715), Expect = 3.380e-93
Identity = 133/166 (80.12%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:   16 TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            +NPMR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    8 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: UPI00053C97D5 (60S ribosomal protein L11-1-like isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C97D5)

HSP 1 Score: 279 bits (714), Expect = 5.140e-93
Identity = 135/173 (78.03%), Postives = 157/173 (90.75%), Query Frame = 1 
Query:    1 QAESK--TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            QA  K  +NPMRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    2 QASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDAMKWFQVKYEGVI 174
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: B7GB09_PHATC (50S ribosomal protein L5, chloroplastic n=3 Tax=Bacillariophyta TaxID=2836 RepID=B7GB09_PHATC)

HSP 1 Score: 278 bits (712), Expect = 8.150e-93
Identity = 132/170 (77.65%), Postives = 155/170 (91.18%), Query Frame = 1 
Query:    4 AESKTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            +E+KTN MR++KVDKL+LNC VGESGDRLTRAA+VLEQLTGQ PV+SKARYT+RSFGIRRNEKIA HVTVRG+KALEILERGLKVKEYEL +KNFS+TG+FGFGI EHIDLG+KYDP+TGIYGMDF+V L RPG RVA+RK +  +IG+ HK+TK D++KWFQ KFEG+V
Sbjct:    2 SETKTNAMREIKVDKLILNCCVGESGDRLTRAARVLEQLTGQQPVFSKARYTLRSFGIRRNEKIAVHVTVRGEKALEILERGLKVKEYELLQKNFSDTGNFGFGINEHIDLGIKYDPTTGIYGMDFFVCLTRPGARVARRKIRQGRIGFNHKITKEDSIKWFQDKFEGVV 171
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A1Z5JJ06_FISSO (50S ribosomal protein L5, chloroplastic n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ06_FISSO)

HSP 1 Score: 278 bits (712), Expect = 8.430e-93
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1 
Query:    4 AESKTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            AE+K NPMRD+KVDK+V+NC VGESGDRLTRAA+VLEQLTGQ PV+SKARYT+RSFGIRRNEKIA HVTVRG+KALEILERGLKVKEYEL  KNFS TG+FGFGI EHIDLG+KYDP+TGIYGMDF+V LNRPG RV++RK +  ++G  HK+TK DA+KWFQ KFEG+V
Sbjct:    2 AETKANPMRDIKVDKMVINCCVGESGDRLTRAARVLEQLTGQQPVFSKARYTLRSFGIRRNEKIAVHVTVRGEKALEILERGLKVKEYELLDKNFSETGNFGFGINEHIDLGIKYDPTTGIYGMDFFVCLNRPGTRVSRRKIQQTRMGKNHKITKQDAIKWFQDKFEGVV 171
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A394D9K8_LUPAN (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A394D9K8_LUPAN)

HSP 1 Score: 278 bits (712), Expect = 9.670e-93
Identity = 132/166 (79.52%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:   16 TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            +NPMR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRV +R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    8 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A4Y7L2D6_PAPSO (Uncharacterized protein n=4 Tax=Papaveroideae TaxID=1462614 RepID=A0A4Y7L2D6_PAPSO)

HSP 1 Score: 278 bits (712), Expect = 1.000e-92
Identity = 132/166 (79.52%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:   16 TNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 513
            TNPMRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRG+KAL++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRV +R+   +++G QH+VTK DA+KWFQ K+EG++
Sbjct:    8 TNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQAPVFSKARYTVRSFGIRRNEKIACYVTVRGEKALQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDALKWFQVKYEGVI 173
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI7.440e-11697.6750S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
A0A0D3AUD9_BRAOL1.740e-9380.12Uncharacterized protein n=10 Tax=Brassicaceae TaxI... [more]
A0A0J8BKL6_BETVV1.740e-9380.12Uncharacterized protein n=6 Tax=Chenopodiaceae Tax... [more]
A0A0K9NLH5_ZOSMR3.270e-9378.3660S ribosomal protein L11a n=1 Tax=Zostera marina ... [more]
A0A1S4CT55_TOBAC3.380e-9380.1260S ribosomal protein L11-1-like n=4 Tax=Nicotiana... [more]
UPI00053C97D55.140e-9378.0360S ribosomal protein L11-1-like isoform X1 n=2 Ta... [more]
B7GB09_PHATC8.150e-9377.6550S ribosomal protein L5, chloroplastic n=3 Tax=Ba... [more]
A0A1Z5JJ06_FISSO8.430e-9378.2450S ribosomal protein L5, chloroplastic n=1 Tax=Fi... [more]
A0A394D9K8_LUPAN9.670e-9379.52Uncharacterized protein n=5 Tax=Pentapetalae TaxID... [more]
A0A4Y7L2D6_PAPSO1.000e-9279.52Uncharacterized protein n=4 Tax=Papaveroideae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:111105..113307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.6
Seed ortholog evalue6.6e-87
Seed eggNOG ortholog2880.D7FN46
Preferred nameRPL11
KEGG koko:K02868,ko:K10523,ko:K15076
KEGG Pathwayko03010,ko04340,ko04341,map03010,map04340,map04341
KEGG ModuleM00177,M00384
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030162,GO:0030234,GO:0030867,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0031984,GO:0032092,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042176,GO:0042177,GO:0042254,GO:0042255,GO:0042273,GO:0042788,GO:0042886,GO:0042975,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043433,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044389,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051090,GO:0051098,GO:0051099,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0055105,GO:0055106,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098772,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1901799,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903506,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2000112,GO:2000434,GO:2000435,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.rRNA binding
EggNOG OGsCOG0094@1,KOG0397@2759
Ec32 ortholog descriptionRibosomal protein L5
Ec32 orthologEc-06_008360.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03400,ko04121
Exons5
Model size688
Cds size498
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929161.578196-UTR-F-serratus_M_contig1239:111104..1112701622929161.578196-UTR-F-serratus_M_contig1239:111104..111270Fucus serratus maleUTRF-serratus_M_contig1239 111105..111270 -
1690962729.5847633-UTR-F-serratus_M_contig1239:111104..1112701690962729.5847633-UTR-F-serratus_M_contig1239:111104..111270Fucus serratus maleUTRF-serratus_M_contig1239 111105..111270 -
1622929161.6803818-UTR-F-serratus_M_contig1239:113283..1133071622929161.6803818-UTR-F-serratus_M_contig1239:113283..113307Fucus serratus maleUTRF-serratus_M_contig1239 113284..113307 -
1690962729.6472638-UTR-F-serratus_M_contig1239:113283..1133071690962729.6472638-UTR-F-serratus_M_contig1239:113283..113307Fucus serratus maleUTRF-serratus_M_contig1239 113284..113307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929161.5912955-CDS-F-serratus_M_contig1239:111270..1113001622929161.5912955-CDS-F-serratus_M_contig1239:111270..111300Fucus serratus maleCDSF-serratus_M_contig1239 111271..111300 -
1690962729.60246-CDS-F-serratus_M_contig1239:111270..1113001690962729.60246-CDS-F-serratus_M_contig1239:111270..111300Fucus serratus maleCDSF-serratus_M_contig1239 111271..111300 -
1622929161.6181734-CDS-F-serratus_M_contig1239:111522..1116531622929161.6181734-CDS-F-serratus_M_contig1239:111522..111653Fucus serratus maleCDSF-serratus_M_contig1239 111523..111653 -
1690962729.6126678-CDS-F-serratus_M_contig1239:111522..1116531690962729.6126678-CDS-F-serratus_M_contig1239:111522..111653Fucus serratus maleCDSF-serratus_M_contig1239 111523..111653 -
1622929161.6324723-CDS-F-serratus_M_contig1239:112150..1123011622929161.6324723-CDS-F-serratus_M_contig1239:112150..112301Fucus serratus maleCDSF-serratus_M_contig1239 112151..112301 -
1690962729.621102-CDS-F-serratus_M_contig1239:112150..1123011690962729.621102-CDS-F-serratus_M_contig1239:112150..112301Fucus serratus maleCDSF-serratus_M_contig1239 112151..112301 -
1622929161.6468186-CDS-F-serratus_M_contig1239:112551..1126131622929161.6468186-CDS-F-serratus_M_contig1239:112551..112613Fucus serratus maleCDSF-serratus_M_contig1239 112552..112613 -
1690962729.6293657-CDS-F-serratus_M_contig1239:112551..1126131690962729.6293657-CDS-F-serratus_M_contig1239:112551..112613Fucus serratus maleCDSF-serratus_M_contig1239 112552..112613 -
1622929161.6643016-CDS-F-serratus_M_contig1239:113159..1132831622929161.6643016-CDS-F-serratus_M_contig1239:113159..113283Fucus serratus maleCDSF-serratus_M_contig1239 113160..113283 -
1690962729.6382794-CDS-F-serratus_M_contig1239:113159..1132831690962729.6382794-CDS-F-serratus_M_contig1239:113159..113283Fucus serratus maleCDSF-serratus_M_contig1239 113160..113283 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1810.1prot_F-serratus_M_contig1239.1810.1Fucus serratus malepolypeptideF-serratus_M_contig1239 111271..113283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1239.1810.1

>prot_F-serratus_M_contig1239.1810.1 ID=prot_F-serratus_M_contig1239.1810.1|Name=mRNA_F-serratus_M_contig1239.1810.1|organism=Fucus serratus male|type=polypeptide|length=166bp
MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFG
IRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQE
HIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTD
AVKWFQAKFEGIVTG*
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mRNA from alignment at F-serratus_M_contig1239:111105..113307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1239.1810.1 ID=mRNA_F-serratus_M_contig1239.1810.1|Name=mRNA_F-serratus_M_contig1239.1810.1|organism=Fucus serratus male|type=mRNA|length=2203bp|location=Sequence derived from alignment at F-serratus_M_contig1239:111105..113307- (Fucus serratus male)
CAGGCGGAATCTAAGACCAACCCGATGAGGGACCTCAAGGTCGACAAGCT
GGTGCTCAACTGCTCCGTTGGAGAGTCAGGTGACCGACTTACGCGCGCGG
CGAAGGTGCTCGAGCAACTCACGGGCCAGTCTCCTGTGTACTCGAAGGGT
GAGCATCAGCGTGCCGCCGGCCAGAGCCGCAAGGCGCGGCAGGCAAGCCG
TTTTCTGTCGACTTTCCGTGCCGCTCAAGTAGACTTACTCGTTCTTCAGT
CTTACTAGCGTGGCATGAACTGTTGTCTGTAGATAACTGTTGGAGCCCTC
GCGGGCTTGGCTTCATCAAGAGCCCGAGCGAAGAAATGTTACCGATTTAA
TATCGAGTCTACCCCAGACCGGTACGAACCTTCCGAACGTTTTTATAACG
AACACCCATAAGATGCAGGGGATTAGTAGAGAGGCACTACTGTAGATTAC
CTACTTCTATTACATAGGAGGTCGATCGTAATTGAATCATTTCATATATA
CTGTACATTTAGAACTGTTCCCACGAGTATGTACATCAAAATGTAGGTGG
TCAAGTCCACGTCGTTCTCTTGGAGAGTTTGGACCACCATCCGATCCGAA
GAACAATGCATAAAACACATCAAGCGCAGGCGGATCTGTTAACGCCACTC
CTGCTTTTCGCCCGTACGTGCCGTTGAATACATTCGCATTTCAGCGCGCT
ACACGGTCCGTTCTTTCGGTATTCGCCGTAACGAGAAGATCGCGTGCCAC
GTGACGGTGAGTGACGAACGAGGTCATCTTGCTTCTGTGCTTGTCTTCCG
CGAACGGGAATAAGAATCGGCGTTTTTCGTGCCATGTCCCGACGCCCCAG
TAACGTCACCGCCTTTGACCTGTTGAATTTTCGTGTCGATCTCAGCCACC
TGGTTGTTCGTGAGGTTGCTGTGTTCTCTCCGTTTCACTGTTGGTGTCCG
TTTGACTTGGTGATGAACCGACGTTGATGTGTTGATCTATTCCGCGGCGT
GTCCAGGTTCGGGGAGACAAAGCGTTGGAGATCCTTGAGCGAGGGTTGAA
GGTGAAGGAGTACGAGCTCAAGCGCAAAAACTTCTCCAACACGGGAAGCT
TTGGGTTTGGCATCCAGGAGCACATCGACCTCGGGCTCAAGTACGACCCA
TCGACCGGTGAGCTTGACGCGAGCGAGGATTCTTTTTTGAGCTGATCACG
ACCTGTGCTTGCTTGGTGGATAAACTAAATTTAATACTGCTAGTTAATAG
TGCTTTCCATAGATACTCCCTCTGACGTCTCTAATCGCTTGAGACTTGAG
TGTGCTGCAGCTGCTACCGCACCTCAGTTCCTTCACCATGGGGCCAATAA
TTGTCGAACAGCGCACTGTCGTGTATCTCTGTGACAAGGGCGCAAAAAGC
TATTAACGAAATCTTCCCCACCTCATTGAGGATAGATTATTTGAAACAGC
AATCAGATTAATGTTTTTTACCCTCGAAACCGTCTGTGGAAACCGACGAC
GTCAGGCTTCGTGAATCGGCGCGGTATGATCACGCGTATGACTCGTTTTC
TTAATTCCGCAAAAACCGAGGCGGGTACGCCACTCCATGTGCTTTGGAGA
CATTTTATTCCGACACCGTCAGTCACGTGTCTAATTACCGTCCTATCTGC
GAAGGTATCTACGGAATGGACTTTTACGTAGTGCTCAACCGCCCCGGCTA
CCGCGTAGCCAAGCGCAAGGAGAAGGTGGCCAAGATCGGTTACCAGCACA
AGGTCACAAAGACTGATGCCGTCAAGTGGTTCCAGGTGAGTTTCCTGATT
CTCTCACGACGGTTTGCATAAAGGCTCGCTGCATGCACGCAACTCGGCGC
AACGTTTGACCGTGATATCTTCCTTGGCGCTCGGTACTGAAAAAATAGGC
TCCGATTTCTTTTGGAACGAAATGACCATTTTTTGTTTTCGTCGTGAAAA
AAATATTGTGTAATCTTACGGACACTCTTCCCTTTTTGACATGTGCGCTT
TTGACAGGCTAAGTTCGAAGGGATCGTGACGGGCTAGGTCCGTGTGGCTT
GGGGTCAGTCAACAACTTCACGGCGCCGTAGCCGTGGTCTGTAGCCTGTG
TAGCCAGTGGCAGGGTGACTAGGCAAAACGATTCTGTCTGAAATGCTGGA
GTCGGTGAATAATTGAAACAAATTTTTCGAATCTCCCTTCAGTCCCAAAA
GTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1239:111105..113307-

>mRNA_F-serratus_M_contig1239.1810.1 ID=mRNA_F-serratus_M_contig1239.1810.1|Name=mRNA_F-serratus_M_contig1239.1810.1|organism=Fucus serratus male|type=CDS|length=996bp|location=Sequence derived from alignment at F-serratus_M_contig1239:111105..113307- (Fucus serratus male)
ATGAGGGACCTCAAGGTCGACAAGCTGGTGCTCAACTGCTCCGTTGGAGA
GTCAGGTGACCGACTTACGCGCGCGGCGAAGGTGCTCGAGCAACTCACGG
GCCAGTCTCCTGTGTACTCGAAGGATGAGGGACCTCAAGGTCGACAAGCT
GGTGCTCAACTGCTCCGTTGGAGAGTCAGGTGACCGACTTACGCGCGCGG
CGAAGGTGCTCGAGCAACTCACGGGCCAGTCTCCTGTGTACTCGAAGGCG
CGCTACACGGTCCGTTCTTTCGGTATTCGCCGTAACGAGAAGATCGCGTG
CCACGTGACGCGCGCTACACGGTCCGTTCTTTCGGTATTCGCCGTAACGA
GAAGATCGCGTGCCACGTGACGGTTCGGGGAGACAAAGCGTTGGAGATCC
TTGAGCGAGGGTTGAAGGTGAAGGAGTACGAGCTCAAGCGCAAAAACTTC
TCCAACACGGGAAGCTTTGGGTTTGGCATCCAGGAGCACATCGACCTCGG
GCTCAAGTACGACCCATCGACCGGTTCGGGGAGACAAAGCGTTGGAGATC
CTTGAGCGAGGGTTGAAGGTGAAGGAGTACGAGCTCAAGCGCAAAAACTT
CTCCAACACGGGAAGCTTTGGGTTTGGCATCCAGGAGCACATCGACCTCG
GGCTCAAGTACGACCCATCGACCGGTATCTACGGAATGGACTTTTACGTA
GTGCTCAACCGCCCCGGCTACCGCGTAGCCAAGCGCAAGGAGAAGGTGGC
CAAGATCGGTTACCAGCACAAGGTCACAAAGACTGATGCCGTCAAGTGGT
TCCAGGTATCTACGGAATGGACTTTTACGTAGTGCTCAACCGCCCCGGCT
ACCGCGTAGCCAAGCGCAAGGAGAAGGTGGCCAAGATCGGTTACCAGCAC
AAGGTCACAAAGACTGATGCCGTCAAGTGGTTCCAGGCTAAGTTCGAAGG
GATCGTGACGGGCTAGGCTAAGTTCGAAGGGATCGTGACGGGCTAG
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