mRNA_F-serratus_M_contig6946.18055.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6946.18055.1
Unique NamemRNA_F-serratus_M_contig6946.18055.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 4.870e-93
Identity = 131/193 (67.88%), Postives = 160/193 (82.90%), Query Frame = 1 
Query:    7 MVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            MVAGM WYQ+E TG + W   AE   EGLEG+E LDDNDLGFQ LNSFGLGYRL  ++S    +K+R L+GA SLYD+R+ +NIPAFWSW NP++ P+WERAVNVDMIMNMEIMLWA+VNGG+  Y++ V +HADTTW D+VRDD ST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG  M+YRY
Sbjct:    1 MVAGMCWYQYEATGQSIWQTYAEDMQEGLEGIEVLDDNDLGFQTLNSFGLGYRLVGTTS----FKDRTLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRY 189
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.910e-92
Identity = 128/195 (65.64%), Postives = 157/195 (80.51%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SGMVAGM+WYQ+E TG+      AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    D Y +RVLTGA++L+DFRW  NIPA+WSWENP+ RP+W+RAVNVDM+MN+EI+LWA +NGG     E V  HAD+TWKDIVR+DNST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG  M+YR+
Sbjct:   87 SGMVAGMFWYQYEATGDEAMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----DDYLQRVLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRF 276
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.660e-90
Identity = 131/195 (67.18%), Postives = 157/195 (80.51%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SGMVAGM+WYQ+E TG   W   AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL  +SS +D      L+GA SLYD+R+ +NIPAFWSW NP S P+WERAVNVDMIMNMEIMLWA+VN G+  Y++   +HADTTW D+VRDD STFHVADY+  TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RY
Sbjct:   57 SGMVAGMFWYQYEATGQNIWRTYAEDMQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGTSSFKDI----TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRY 247
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 5.840e-90
Identity = 132/193 (68.39%), Postives = 156/193 (80.83%), Query Frame = 1 
Query:    7 MVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            MVAGM+WYQ+E T  + W   AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL    S    +KER L GA+SLYDFR+ +NIPAFWSW+ PS  P+WERAVNVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+D ST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG  M++RY
Sbjct:    1 MVAGMFWYQYEATCASKWKTYAEDIQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGKGS----FKERTLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRY 189
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.300e-88
Identity = 130/195 (66.67%), Postives = 159/195 (81.54%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SGMVAGM+WYQ+E TG+ T    AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    + Y +RVLTGA++L+ FRW  NIPA+WSWENPS RP+W+RAVNVDM+MN+EI+LWA +NGG     E VA HAD+TWKDIVR+DNST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG  M+YR+
Sbjct:  124 SGMVAGMFWYQYEATGDETMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----EEYLQRVLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRF 313
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 186 bits (472), Expect = 1.430e-53
Identity = 92/196 (46.94%), Postives = 126/196 (64.29%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWER-AVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SG V G++WY  +L+ +A WA +   + +G+       DND GFQ+  +FG    L +     D Y   ++ GAD+L D RW +NI AF +W    S P  E   VN+DM+MNMEI+LWAS +GGNT +A+    HAD +W+D+VRDD STFHV DY+ D G +  + T+QG+  +STW+RGQAWAVYG  M+YRY
Sbjct:   74 SGFVPGIFWYLSDLSNDAIWANRGARWDQGVRSRATATDNDTGFQIYCAFGTALMLGADVDTSD-YTSVIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRY 267
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 167 bits (422), Expect = 1.350e-46
Identity = 85/199 (42.71%), Postives = 122/199 (61.31%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SG V G++WY   +T + +W +KAEF+ EG+       DND GFQV +SFGLGY +   +S  D YK+ +  GA++L   R+  +I AF SW    +NP++ P     VN+D +MNME++LW   N     Y +    HAD TW+  VRD+ ST+HV  Y+ D G +  + T+QG+  +STW+RGQAW+VY   M YR+
Sbjct:   82 SGFVPGIFWYLNAMTADQSWQKKAEFWTEGVRSRAYATDNDTGFQVFDSFGLGYTIGGVTS--DDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPF---EVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRF 274
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 165 bits (417), Expect = 7.410e-46
Identity = 81/196 (41.33%), Postives = 116/196 (59.18%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRP-EWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SG + G++WY   L+ N  W + AE + EG+       DND GFQ+ NSFGLGY +    S  D YK+ ++ GA +L   R+  +I AF SW    S P      VN+D +MNME++LW   +     + +    HAD TW+  VR++ ST+HV  Y P +G++V++ T+QG+   STW+RGQAW+VY   M YRY
Sbjct:   83 SGFIPGIFWYLNALSNNGQWQQYAEHWTEGVRSRAYATDNDTGFQIFNSFGLGYTMGKKPS--DDYKQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPFEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRY 275
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 160 bits (405), Expect = 3.880e-44
Identity = 81/199 (40.70%), Postives = 121/199 (60.80%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SG V G++WY   LT +  W ++A+F+ +G+       DND GFQ+ +SFGLGY L  +++    YK+ ++ GA+++ + R+  NI  F SW    +NP+  P     VN+D +MNME++LW   N     Y E    HAD TW+  +R + ST+HV  Y  D G +V++ T+QG+  +STW+RGQAW+VY   M YRY
Sbjct:   77 SGFVPGIFWYLNALTNDEVWQQRAKFWTDGVRSRAYATDNDTGFQIFDSFGLGYTLGGNAT--PDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPF---EVNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRY 269
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BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 6.960e-44
Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 1 
Query:    1 SGMVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWE----NPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY 585
            SG V G++WY   +T +  W  +A  + EG+       DND GFQ+ +SFGLGY +   ++  + YK  ++TGA +L + R+   I AF SW+    NP S P     VN+D +MNME++LW   N     Y +    HAD TW + VR++ ST+HV  Y+   G +V++ T+QG+   STW+RGQAWAVY   M YRY
Sbjct:   89 SGFVPGIFWYLSVMTEDKEWKNRAVSWTEGVRARSYATDNDTGFQIFDSFGLGYTIGGENT--EDYKSVMVTGAKTLVEERYNNEIGAFRSWKQGVSNPISMPF---EVNIDQLMNMELVLWVGKNADKPEYTQMAISHADKTWANNVRENGSTYHVVSYNSQ-GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRY 281
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6946.18055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQV0_9PHAE4.870e-9367.88GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LHN8_ECTSI1.910e-9265.64Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7FUJ9_ECTSI2.660e-9067.18Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D7FQV4_ECTSI5.840e-9068.39Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5KCI0_9PHAE1.300e-8866.67GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6N6ZAI7_9BACT1.430e-5346.94Putative unsaturated glucuronyl hydrolase n=1 Tax=... [more]
UPI001F1B9B3F1.350e-4642.71glycoside hydrolase family 88 protein n=1 Tax=Vibr... [more]
R9PSV9_AGAAL7.410e-4641.33Putative unsaturated glucuronyl hydrolase n=4 Tax=... [more]
UPI00200F56053.880e-4440.70glycoside hydrolase family 88 protein n=1 Tax=Agar... [more]
A0A4Y7ZV10_9GAMM6.960e-4441.21Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6946contigF-serratus_M_contig6946:16277..18465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.0
Seed ortholog evalue6.7e-75
Seed eggNOG ortholog2880.D7FUK0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl Hydrolase Family 88
EggNOG OGs2CYCX@1,2S3MN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size587
Cds size579
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932122.656069-UTR-F-serratus_M_contig6946:16276..162821622932122.656069-UTR-F-serratus_M_contig6946:16276..16282Fucus serratus maleUTRF-serratus_M_contig6946 16277..16282 +
1690964158.6480622-UTR-F-serratus_M_contig6946:16276..162821690964158.6480622-UTR-F-serratus_M_contig6946:16276..16282Fucus serratus maleUTRF-serratus_M_contig6946 16277..16282 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932122.6801155-CDS-F-serratus_M_contig6946:16282..163391622932122.6801155-CDS-F-serratus_M_contig6946:16282..16339Fucus serratus maleCDSF-serratus_M_contig6946 16283..16339 +
1690964158.66678-CDS-F-serratus_M_contig6946:16282..163391690964158.66678-CDS-F-serratus_M_contig6946:16282..16339Fucus serratus maleCDSF-serratus_M_contig6946 16283..16339 +
1622932122.6935527-CDS-F-serratus_M_contig6946:16576..166481622932122.6935527-CDS-F-serratus_M_contig6946:16576..16648Fucus serratus maleCDSF-serratus_M_contig6946 16577..16648 +
1690964158.6788077-CDS-F-serratus_M_contig6946:16576..166481690964158.6788077-CDS-F-serratus_M_contig6946:16576..16648Fucus serratus maleCDSF-serratus_M_contig6946 16577..16648 +
1622932122.7350168-CDS-F-serratus_M_contig6946:17044..171581622932122.7350168-CDS-F-serratus_M_contig6946:17044..17158Fucus serratus maleCDSF-serratus_M_contig6946 17045..17158 +
1690964158.6899035-CDS-F-serratus_M_contig6946:17044..171581690964158.6899035-CDS-F-serratus_M_contig6946:17044..17158Fucus serratus maleCDSF-serratus_M_contig6946 17045..17158 +
1622932122.7484245-CDS-F-serratus_M_contig6946:17565..177171622932122.7484245-CDS-F-serratus_M_contig6946:17565..17717Fucus serratus maleCDSF-serratus_M_contig6946 17566..17717 +
1690964158.703403-CDS-F-serratus_M_contig6946:17565..177171690964158.703403-CDS-F-serratus_M_contig6946:17565..17717Fucus serratus maleCDSF-serratus_M_contig6946 17566..17717 +
1622932122.829062-CDS-F-serratus_M_contig6946:17977..180751622932122.829062-CDS-F-serratus_M_contig6946:17977..18075Fucus serratus maleCDSF-serratus_M_contig6946 17978..18075 +
1690964158.716088-CDS-F-serratus_M_contig6946:17977..180751690964158.716088-CDS-F-serratus_M_contig6946:17977..18075Fucus serratus maleCDSF-serratus_M_contig6946 17978..18075 +
1622932122.9049788-CDS-F-serratus_M_contig6946:18379..184651622932122.9049788-CDS-F-serratus_M_contig6946:18379..18465Fucus serratus maleCDSF-serratus_M_contig6946 18380..18465 +
1690964158.7277057-CDS-F-serratus_M_contig6946:18379..184651690964158.7277057-CDS-F-serratus_M_contig6946:18379..18465Fucus serratus maleCDSF-serratus_M_contig6946 18380..18465 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6946.18055.1prot_F-serratus_M_contig6946.18055.1Fucus serratus malepolypeptideF-serratus_M_contig6946 16283..18465 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6946.18055.1

>prot_F-serratus_M_contig6946.18055.1 ID=prot_F-serratus_M_contig6946.18055.1|Name=mRNA_F-serratus_M_contig6946.18055.1|organism=Fucus serratus male|type=polypeptide|length=193bp
MVAGMYWYQFELTGNATWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGL
GYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWE
RAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFH
VADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRY
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mRNA from alignment at F-serratus_M_contig6946:16277..18465+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6946.18055.1 ID=mRNA_F-serratus_M_contig6946.18055.1|Name=mRNA_F-serratus_M_contig6946.18055.1|organism=Fucus serratus male|type=mRNA|length=2189bp|location=Sequence derived from alignment at F-serratus_M_contig6946:16277..18465+ (Fucus serratus male)
AGCGGAATGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACGGGAAA
CGCCACATGGGCGGTAAGAGAAGGAGTCTTGCTCCGTCGCCGCCGCTGCC
TGTTTTCCGACTTGGACAGTTGTACACAAGGCCGCGCAAGATACAGTCGG
CATTTGGCCGCCCTTACGTACCACTTTCCCACGACGCTGTAGAATCCACC
ATCAGGTTTCTTCGGCCGAGCTTTAGTAACAGCGTGTACGAGAGCACGTC
GTTGAACGGTTATGTATGTTCCCCATTATTCGTGCAAATCAATGCCACAG
GAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGA
TGACAACGATCTTGGTTTCCAGGCGAGAGATGCGGGCATGTTCACGTGTT
CGTGTCCTGAGGGGCGCGTTGTCTGCGAACTTTTATTATATAATTCCAGA
TTGTTTTTAGCGCTGTGTTCTTACATCCATCACGAGGTCACAACAAAGGG
AGAACGGCAAGGTTCAAACATTTCCACGTGACGGACGTTTCAGCCCACAA
CGGGATGGAGAAAACTCATTTGCATTCTTTGTGGAAAATTATAGCTGAAA
TAGAATTTCCTCCCATCGGACCTACGTGGCTAACGAGCAGGAAGCTTCCT
CGCAATGCTGCGTCTCGTGCATTTACAATGCCTTGCAATGCATCTCATGC
ATTCATCATCTACTTGGTGTGACACTTGCGTAACGGAGAAGCATTGCATG
CACCGCTGGCGTTTGCAGGTACTCAACTCTTTCGGTCTAGGTTACAGGCT
CTCGTCGTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGTGCTAACGG
GCGCTGATTCGCTCTACGACTTTAGGTGGACGGTAAGAACCTCTGTATAC
TGTATGGTACCAAGTGTCACCTGGGTCTGTTAAATACTTGTGCCGCCGCA
TCTTTACGAATCTCGCAGTAGCTGTACACATTTGACATGGGGCGTAACCG
ATGGTTAGCGTACCAAACTAGTCCGTTGCCATCCCCGGGCTCGTGCAGAT
ATTCTTGGCGAAACAAAACATGGCAATCCTTTCTCGCCCGACCCAACTGC
GTGCGCTACCTTCGCTAGCCACCTTTAATAAACGGGGGCTGCTGTCGTTC
GCTTAGCTTAGCTGTCGGGCCTTGTCAGAAGAAAAATACATGGCGGTGGA
AAAGCGTTCACACATTTTGAGTCGTGGATGGTCCGGACGTTTTCATTACT
GAAGCATTTCTGCTACGACCCACTGGCGCTGAAAAACAGGCCAACATCCC
CGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTG
CCGTCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGT
GTCAATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGAGTGAGTATT
CATAGGATAAGCAGAGACTTTGATTTTCACTATGCAGGTCTCTTCACCCG
GTGACGCATCTACTCGTCTTACAGACCTGTCACTACTCGACCCAGGCTGC
CCTCGAGGATCAAAGAACGTTCATGGTCGTACCCTCTAGCACCTCTTACC
GTCGAATCTCACTCTCGCGAACTTCTTTATTCTTTTTCTACGCTGACACT
CCTCAAATTAAAATGCGAAACGTGATCCTGCATCGACGACGACCCTTCTA
GCCACGCTGACACCACGTGGAAAGACATCGTCCGTGATGACAACAGCACG
TTCCACGTAGCGGACTATGACCCCGATACCGGAGATCTTGTGGAACAAGG
TACGTAGGGTAAATGTTCACTCGCGCGTACTAAGAAAGCGATTTCAATCA
CATTGAGCCTCACTCTTTACGAGTTTTTGTTTCCCGTGAGCCTCGTCGGT
TTGGTTTGAAACCCGAACGCAACACCGCCGGCCAACATTGCAAGCGCCGA
AACTTCTTTTTGTCCAGAAACATGAGAACGAAGAATCGTTGAACCGGCAT
CGAAGTATGATTTCGACGTGGTCGACTCGCCGGCATAAGAGGTGCAGCAC
GGATTTGTTCCTTTATACTTAGAAAAAGGTTGTGCGTGCATTGCTCCCTA
TAGGGACGTACCAAGGTTACGCCGACAACTCTACCTGGACAAGGGGGCAG
GCCTGGGCCGTTTACGGAAACGTGATGATCTACCGCTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig6946:16277..18465+

>mRNA_F-serratus_M_contig6946.18055.1 ID=mRNA_F-serratus_M_contig6946.18055.1|Name=mRNA_F-serratus_M_contig6946.18055.1|organism=Fucus serratus male|type=CDS|length=1158bp|location=Sequence derived from alignment at F-serratus_M_contig6946:16277..18465+ (Fucus serratus male)
ATGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACGGGAAACGCCAC
ATGGGCGATGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACGGGAA
ACGCCACATGGGCGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGC
GTGGAGGAGTTGGATGACAACGATCTTGGTTTCCAGGAGAAAGCCGAATT
CTTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGATGACAACGATCTTG
GTTTCCAGGTACTCAACTCTTTCGGTCTAGGTTACAGGCTCTCGTCGTCC
AGCTCTCTCCGTGATGCTTACAAGGAGAGGGTGCTAACGGGCGCTGATTC
GCTCTACGACTTTAGGTGGACGGTACTCAACTCTTTCGGTCTAGGTTACA
GGCTCTCGTCGTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGTGCTA
ACGGGCGCTGATTCGCTCTACGACTTTAGGTGGACGGCCAACATCCCCGC
CTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTGCCG
TCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGTGTC
AATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGAGCCAACATCCCC
GCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTGC
CGTCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGTG
TCAATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGACCACGCTGAC
ACCACGTGGAAAGACATCGTCCGTGATGACAACAGCACGTTCCACGTAGC
GGACTATGACCCCGATACCGGAGATCTTGTGGAACAAGCCACGCTGACAC
CACGTGGAAAGACATCGTCCGTGATGACAACAGCACGTTCCACGTAGCGG
ACTATGACCCCGATACCGGAGATCTTGTGGAACAAGGGACGTACCAAGGT
TACGCCGACAACTCTACCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGG
AAACGTGATGATCTACCGCTACGGACGTACCAAGGTTACGCCGACAACTC
TACCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGTGATGATCT
ACCGCTAC
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