prot_F-serratus_M_contig693.18032.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig693.18032.1
Unique Name	prot_F-serratus_M_contig693.18032.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	429

Homology

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BLAST of mRNA_F-serratus_M_contig693.18032.1 vs. uniprot
Match: A0A6H5L7M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M4_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 4.700e-63
Identity = 139/328 (42.38%), Postives = 180/328 (54.88%), Query Frame = 0

Query:  136 CTSEQTQSALEASSAYVQCTEVDYETFMTLVHADVDVLQGASTCFAEKVQE-TEETAEPDEN----------GEVVIEVDEVFAECIQEVXXADDTKATAATADFLNKLIGSDSKICSCLPSFVEKTPDCDMWMRYRHFAMHLEDLCEAVDSAVENA-AMPGIVELEAA-NQTENQDKAFEAA-PQGNAK----------------GSNGVMDEHP-----YGPCPPGQETHPEDPTKCQTSENQETYFNEHESSGGRGPPPEGQGSIFGALMSVVGVVALAGVVGVGGLWAWGKFHGGARQPGVRYMAANVDNDIGTELGPFGREYA 428
            CT  QTQ+AL+A++ YV+C  +DY  F  LVHADV +L+ A+ CF  K  E  EE   PD+N           E   ++   F EC++E   A+D +A+ AT  FL K++  +S IC+CLP F+ K P C  W+RY      ++++C+ +D       A   I E++    + ++QD A  A  P  + K                G        P     +GPCPPGQE HP DP  CQ S N E Y  E E   GR    EG G I   L SV+GVVA+ GV  VGGLWAWGKF  G RQPGVRYMA  +DN+IGTELGPFGR+YA
Sbjct:   91 CTQTQTQAALKATANYVKCAFLDYADFQALVHADVSILEDAAACFKTKADEIAEEIPPPDDNMSEDEVKALEKETAEKLATAFQECVKEAE-AEDEEASQATVQFLEKMLAEESTICACLPPFLIKMPSCGPWIRYHDVGEIVQNVCDFIDDGNNTVVADMDIAEVDVTPEERDSQDNATVAVLPAEDTKKLEXXXXXXXXXXXEAGIXXXXXRRPRLPNTFGPCPPGQEVHPSDPKACQPSLNSEEYQGE-EFGDGRDSRREGGGMISLGL-SVIGVVAVGGVXXVGGLWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 415

[Close]

BLAST of mRNA_F-serratus_M_contig693.18032.1 vs. uniprot
Match: D8LR88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR88_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.690e-54
Identity = 129/316 (40.82%), Postives = 164/316 (51.90%), Query Frame = 0

Query:  136 CTSEQTQSALEASSAYVQCTEVDYETFMTLVHADVDVLQGASTCFAEKVQE-TEETAEPDEN----------GEVVIEVDEVFAECIQEVXXADDTKATAATADFLNKLIGSDSKICSCLPSFVEKTPDCDMWMRYRHFAMHLEDLCEA-VDSAVENA-----AMPGIVELEAANQTENQDKAFEAAPQGNAKGSNGVMDEHP------YGPCPPGQETHPEDPTKCQTSENQETYFNEHESSGGRGPPPEGQGSIFGALMSVVGVVALAGVVGVGGLWAWGKFHGGARQPGVRYMAANVDNDIGTELGPFGREYA 428
            CT  QTQ+AL+A++ YV+C  +DY  F  LVHADV +L+ A+ CF  K  E  EE   PD+N           E   ++   F EC++E   A D +A+ AT  FL KL+  +S IC+CL  F+ K P C  W+RY      ++++  A VD   E       A+  ++  E   +                        EHP      +GPCPPGQE HP DP  CQ S N E Y  E E   GR    EG G I   L SV+GVVA+         WAWGKF  G RQPGVRYMA  +DN+IGTELGPFGR+YA
Sbjct:   91 CTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEIAEEIPPPDDNMSEEEVKALEQETAEKLATAFQECVKEAE-AGDEEASQATVQFLEKLLAEESTICACLSPFLIKMPTCGPWIRYHDVGKIVQNVLVAEVDLTPEEKDSQDDAIVAVLPAENTKKLXXXXXXXXXXXXXXXXXXXXXXXEHPAHLPNAFGPCPPGQEAHPSDPKACQPSMNSEEYQGE-EFGDGRDGRREGGGMISLGL-SVMGVVAVGXXXXXXXXWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQYA 403

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig693.18032.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig693.18032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L7M4_9PHAE	4.700e-63	42.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LR88_ECTSI	1.690e-54	40.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 368..393
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 15..26
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 394..428
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..367
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..31
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 5.0
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..29 score: 0.756
None	No IPR available	TMHMM	TMhelix		coord: 371..393

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig693	contig	F-serratus_M_contig693:117539..136609 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig693.18032.1	mRNA_F-serratus_M_contig693.18032.1	Fucus serratus male	mRNA	F-serratus_M_contig693 116052..136783 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig693.18032.1 ID=prot_F-serratus_M_contig693.18032.1|Name=mRNA_F-serratus_M_contig693.18032.1|organism=Fucus serratus male|type=polypeptide|length=429bp
MLGSRGNKSPRARRVWILVAALIVAVACGQSGDSEGQGGPPDHSGGPPGH
EGQGGPPDHAGGPPGHEGQGGPPDHAGGPPDHEGGPPNHESGDQGHPPFG
QHDGEHGPPTGEHEGMGGGSMMNEGPGNERGPPPTCTSEQTQSALEASSA
YVQCTEVDYETFMTLVHADVDVLQGASTCFAEKVQETEETAEPDENGEVV
IEVDEVFAECIQEVEDADDTKATAATADFLNKLIGSDSKICSCLPSFVEK
TPDCDMWMRYRHFAMHLEDLCEAVDSAVENAAMPGIVELEAANQTENQDK
AFEAAPQGNAKGSNGVMDEHPYGPCPPGQETHPEDPTKCQTSENQETYFN
EHESSGGRGPPPEGQGSIFGALMSVVGVVALAGVVGVGGLWAWGKFHGGA
RQPGVRYMAANVDNDIGTELGPFGREYA*