mRNA_F-serratus_M_contig687.17931.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig687.17931.1
Unique NamemRNA_F-serratus_M_contig687.17931.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 1.770e-141
Identity = 221/407 (54.30%), Postives = 297/407 (72.97%), Query Frame = 3
Query:  465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIAVR--STSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            DL+  +C+GC   C+GC+F +     PTCT L    +EH+TS  G  T+E L I  GYWRAT   T++  C++  AC GG+TG   YC  GYEGPYC++CS+ Y+  +S+TCR CS++A GIA+A  L ++   + + ++SY+ S E  G GRGIV+R+ R +P+ SVKIV++ WQI+TQF +VANVT+P++Y  FL+ L++FNFDLSW++S GC +DVDFHDRL+  TI P+ A + L  TYA A+   RG+T+ T EN+RHKHV M LL+TF VYSSVS+ +F+ FACE L+DGK YLLAD++I+CDS+KH+  ++YAGFMVLLY  GIP  Y++LLF +R +L+      + +  R  STSDLWKPYKP  FYYEVVEC RR+LL GVVVFIYPNS++QIA TL
Sbjct: 1109 DLFEAVCNGCQTACVGCAFADPLLV-PTCTDL----LEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATE-TLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITL 1509          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 9.930e-139
Identity = 217/404 (53.71%), Postives = 286/404 (70.79%), Query Frame = 3
Query:  471 YGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIA-VRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            Y   C GC   C GC F       PTCT +    +EH TS GGT T+E+L + +GYWRA+  S ++  C+N+ AC GG+TG   YC +GYEGPYC+VCS  Y   L++ C  CS  A  IA+A VL ++   V   + SY +S  +     G+V RL + +P+ SVKIVI+ WQILTQF SVANVT+P++Y +FLD LD+FNFDLSWV+S GC  D+DFHDRL+ +T++PV+ L+FL GTYA A+   RG  + + + I +KHVS+ LL+TFL+YSSVS+ +F+ F CE L+DG  YL AD+ IDCDS+KH+A Q+YAGFMV++Y VGIP  YA+LLF +R +L++ +   E  A   STSDLWKPYKP  FYYEV+ECGRR+LL GVVVFI+PN+A+QIA TL
Sbjct:  757 YEAACGGCETACDGCFFEPPVP--PTCTDV----MEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAE-SLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITL 1153          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 2.540e-135
Identity = 211/405 (52.10%), Postives = 276/405 (68.15%), Query Frame = 3
Query:  468 LYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIA-VRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            LY  IC GCP +C GCSF    +  P C+      +EH+ S GGT T++ L I  GYWRAT  S ++ +C+N  AC GG+TG   YC  GYEGPYC+VCS  Y   L   C +CS+ A  IA+   +++      + ++SY +S E  G  RG+V+R  R VP+ SVKIVI+ WQILTQF SVAN+ FP++Y +FLD L++FNFDL WV+S GC  DVDFHDRL+ +TI P+V L+FL   YA A      S++   + + HKHVS+ LL+TFLVY+SVS+V+FQ FACE LDD K YL AD++I+CDS KH A Q+YAGFM++LY VGIP  Y   LF +  +L+ +    E +A +  T+DLWKPY+P  FYYEV+EC RR+LL GVVVFIYPN+A+QIA  L
Sbjct:  476 LYEAICDGCPVECEGCSF-EEPQLVPKCSDA----LEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDL-QRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVAL 874          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 4.380e-133
Identity = 216/411 (52.55%), Postives = 292/411 (71.05%), Query Frame = 3
Query:  465 DLYGTICSGCP----DKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC--RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            D Y T+C GCP    D  +    G+     P C       ++H  S GG  TIE L +  GYWRATN+S ++  C+N  AC GG+T DP +C RGYEGPYCSVCS+ Y+ SL++TC EC +   GIAI  V+ +      I +  +L+S EM GA RG++ R+ +R+P+ S+KIV++VWQILTQF+SVANVT+P++Y +FLD ++I NFD+ W+ S GC ++VDFH RL+  TI P+VAL  L  TY VA  +  GS +   + IRHKH+SM LL+TFLVYSSVS+ VFQ FACE LDD K+YL AD++I+CDS++H+A Q++AG M+L+YPVGIP+ Y +LL+ +RR+L++E+   R  +  V+  SDLW PYKP RFYYEV+EC RR+ LTGVVVFIYPN+A+Q+A TL
Sbjct: 1271 DRYQTVCDGCPVNNSDWIVSVENGDRV---PICVVQ----LDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGS-EAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTL 1673          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 3.600e-130
Identity = 203/410 (49.51%), Postives = 280/410 (68.29%), Query Frame = 3
Query:  456 QREDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEA--IAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            + +DL+ T+C GC       +F       P C  L    +EH+TS  G  T+E L I +GYWRAT  S ++  C++ +AC GG+TG   YC  GY+GPYC+VCS  ++    +TCRECS+SA GI +A  L +      +V++SY+ S +  G G+GIV+R+   +P+ SVKIV++ WQ++TQF  VAN+T+P++Y  FLD L +FNFDL W++S GC  DVDFHDRL+ +TI P++A++ L  TYA A    RG+T  T +N+  KHV + LL++F VYSSVSS +F+ FACE L DGK YL AD++I+CDS++H+  ++YAG M+L+Y VGIP  Y +LL+ +R  L+  +   E     V STSDLWKPY+P  FYYEV+ECGRR+LL GVVVFIYPNS +QIA TL
Sbjct:  915 ESDDLFETVCDGCQTXXXXXAFAEPLLV-PMCRDL----LEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITL 1319          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 5.120e-128
Identity = 209/404 (51.73%), Postives = 279/404 (69.06%), Query Frame = 3
Query:  471 YGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            +  +C GC   C GCSF +     PTC+ +    ++H TS GG  T+E L I  GYWRAT+ S +I  C+N  AC GG+TG   YC   YEGPYCS+CS  YA +L Y+C +C + + GI  A  + +LA  V +V+I Y++S E       +++RL   VP+ SVKIVI+ WQILTQFAS ANV +P +Y +FLD L +F FDL W+MS GC LD+ FH RL+  TI P+ A++ L GTYA A    R + +     I  KHV + LL+TFLVYSSVSS +F+ FAC+ L+DGK YL  D++I+CDS+KH+  Q+YAGFM+LLYP+GIPM Y+ LLF +R +L+ +   R ++  V+STS+LW+PYKP  FYYEV+ECGRRILLTG+VVFIYPN+A+Q+A TL
Sbjct:  927 FEAVCDGCRVACDGCSF-DEPPAVPTCSDV----MDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITL 1324          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 2.150e-127
Identity = 212/408 (51.96%), Postives = 290/408 (71.08%), Query Frame = 3
Query:  465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECS-NSAVGIAIATVLTLLATTVGIVIISYLLSAEM-MGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            D +  IC+GC   C GC F   +   P CT +    ++H+TS GG  T++ L I +G+WRA+  ST++  C++  AC GG+TG   YC  GYEGPYC +CS  Y   LS+ C +CS NSA GIA+A VL LL   + + ++SY+ S E+ MG   GIV+ +TR +P+ S+KIVI+ WQILTQF SVANVT+P++Y   LD LD+FNFDLSW++S GC +D++FH RL+ +TI+P+VAL+ L  TYA A    RG  +  +  I +KHV++ LL+TF VYSSVSS +F+ FAC+ LD  K YL AD+ I+C+S++HR +Q+YAGFM+++Y VGIP  YA LLF +R +L++E+  R E   V+S S+LW+PYKP  FYYEV+EC RR+LL GVVVFIYPN+A+QIA TL
Sbjct: 1008 DHFEAICNGCETTCDGCVFAEGSLA-PICTEV----MDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNI-IWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTL 1409          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 1.270e-125
Identity = 200/406 (49.26%), Postives = 273/406 (67.24%), Query Frame = 3
Query:  465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNE-NCRMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            D     CSGC   C GC         P    L    I H+ S GG  T+E L I  GYWRATN ST++  C+N  AC GG+TG  +YC  GYEGPYC++CS +Y+  L +TC +C N A GI +AT L ++     + ++SY+        G  +   L R +P+ ++KI+++ WQI+TQF S ANVT+P++Y +FL+ LD+FNFD+SWV+S GC +D+DFHDRL+ +TI P++AL+FL  TY       RG+   T + +  +HVSM LL+ FLVYS VSSVVFQ FAC+ L+ G  YL AD++I+CDS+KH+  ++YAGFM+LLYPVGIP  Y  LL  +R +L+ + + R +   V S S+LW+PY+P  +YYEV+ECGRRILLTG+VVFIYPN+A+QIA TL
Sbjct:  517 DALDEACSGCQTTCDGCVQ-------PPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNA-ATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITL 914          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 8.050e-125
Identity = 205/407 (50.37%), Postives = 281/407 (69.04%), Query Frame = 3
Query:  462 EDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            +  +  +C GC   C GCSF +     PTC+ +    ++H+TS GG  T+E L I  GYWRAT+ S  I  C+N  AC GG+TG   YC   YEGPYCS+CS  YA +L Y+C +C + + GIA A  L ++A  V +V+I Y++S E       + +RL   VP+ SVKIVI+ WQI+TQFAS ANV +P +Y +F+D L +F FDL W++SVGC LD+DFH RL+  TI P+ A++ L GTYA A    R + +     I  KHV + LL+TFLVYSSVSS +F+ FAC+ L+DG  YL  D++I+CDS+KH+  Q+YAGFM+LLYP+GIP+ Y+ LLF +R +L+ +   R ++  V+STS+LW+PYKP  FYYEV+ECGRR+LLTG++VFIYPN+A+Q+A TL
Sbjct:  984 DGTFEAVCDGCRVACDGCSF-DEQPAVPTCSDV----MDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITL 1383          
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 6.310e-124
Identity = 216/413 (52.30%), Postives = 279/413 (67.55%), Query Frame = 3
Query:  456 QREDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCREC-SNSAVGIAIATVLTLLATTVGIVIISYLLSAEM-MGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTY--AVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLL-QNENCRMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
            Q +D +  +CSGC   C GC F       P CT +    +EHATS GG  T+E L I  GYWRAT  S D+  C++ +AC GG+T    YC  GYEGPYCSVCS  Y+  L + C +C   +  GI I  VL +  T V   I SY+ S E  MG G G ++R+TR +P+ SVKIVI  WQILTQF S+ANVT+P++Y  FL  LD+FNFDL W +SV C +D+DFHDRL+ +TI+P+ AL+FL  TY  A +LY+ +  T      ++HKH SM LL+TF VYSSVSS++F+ FACE L D K YL +D++I+CDS+KH+  Q+YA FM+L+Y VGIP  YA LLF +R LL Q+ + R +   V S +DLW+PY    FYYEV+ECGRR+LL GVVVFIYPN+A+QIA TL
Sbjct: 1116 QSDDPFEVMCSGCEVTCEGCVFDEGLLV-PACTEV----MEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGA---VQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTL 1520          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC0_ECTSI1.770e-14154.30Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G301_ECTSI9.930e-13953.71Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI2.540e-13552.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY65_9PHAE4.380e-13352.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIY0_ECTSI3.600e-13049.51Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI5.120e-12851.73Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K0E9_9PHAE2.150e-12751.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI1.270e-12549.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z1_9PHAE8.050e-12550.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI6.310e-12452.30Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig687contigF-serratus_M_contig687:205856..208821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue6.6e-86
Seed eggNOG ortholog2880.D8LSC0
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1679
Cds size774
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig687.17931.1prot_F-serratus_M_contig687.17931.1Fucus serratus malepolypeptideF-serratus_M_contig687 205856..207123 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932099.1707463-CDS-F-serratus_M_contig687:205855..2065301622932099.1707463-CDS-F-serratus_M_contig687:205855..206530Fucus serratus maleCDSF-serratus_M_contig687 205856..206530 -
1690964146.382477-CDS-F-serratus_M_contig687:205855..2065301690964146.382477-CDS-F-serratus_M_contig687:205855..206530Fucus serratus maleCDSF-serratus_M_contig687 205856..206530 -
1622932099.1962523-CDS-F-serratus_M_contig687:207024..2071231622932099.1962523-CDS-F-serratus_M_contig687:207024..207123Fucus serratus maleCDSF-serratus_M_contig687 207025..207123 -
1690964146.3984528-CDS-F-serratus_M_contig687:207024..2071231690964146.3984528-CDS-F-serratus_M_contig687:207024..207123Fucus serratus maleCDSF-serratus_M_contig687 207025..207123 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932099.2164605-UTR-F-serratus_M_contig687:207123..2072781622932099.2164605-UTR-F-serratus_M_contig687:207123..207278Fucus serratus maleUTRF-serratus_M_contig687 207124..207278 -
1690964146.4094858-UTR-F-serratus_M_contig687:207123..2072781690964146.4094858-UTR-F-serratus_M_contig687:207123..207278Fucus serratus maleUTRF-serratus_M_contig687 207124..207278 -
1622932099.2312212-UTR-F-serratus_M_contig687:207519..2078071622932099.2312212-UTR-F-serratus_M_contig687:207519..207807Fucus serratus maleUTRF-serratus_M_contig687 207520..207807 -
1690964146.4202619-UTR-F-serratus_M_contig687:207519..2078071690964146.4202619-UTR-F-serratus_M_contig687:207519..207807Fucus serratus maleUTRF-serratus_M_contig687 207520..207807 -
1622932099.2488549-UTR-F-serratus_M_contig687:208359..2088211622932099.2488549-UTR-F-serratus_M_contig687:208359..208821Fucus serratus maleUTRF-serratus_M_contig687 208360..208821 -
1690964146.4316034-UTR-F-serratus_M_contig687:208359..2088211690964146.4316034-UTR-F-serratus_M_contig687:208359..208821Fucus serratus maleUTRF-serratus_M_contig687 208360..208821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig687.17931.1

>prot_F-serratus_M_contig687.17931.1 ID=prot_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFL
DRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVAL
YKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGK
RYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQ
NENCRMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNS
ASQIAFTL
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mRNA from alignment at F-serratus_M_contig687:205856..208821-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig687.17931.1 ID=mRNA_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=mRNA|length=2966bp|location=Sequence derived from alignment at F-serratus_M_contig687:205856..208821- (Fucus serratus male)
GGCGGGGCGGTGTTCGTAGCGGGCATCGGGATCGGGCCGGTATTTCGGAA CGTAACCTTTCTGGGAAATTTTGCCCAGACCGGTGGCGGCGTACATGCCA CTGGAAGCGGGACCGAGTTGAGCGGTGACAACCTAGGGGGGAAAGTGAAT AATCCCACAATTTTCAACGGCTGCAGCTTCATTGGGAACATTGCTTTCGC AACTGGCGGGGCGGTCGACAGCGCCTCTGGCCAGGATGTCTTCAACAACA CGTTGTTTAAGGGCAATGAAGCTAGGGCGGGGGGAGCTTTGAGGCTCGGT GGTTCGGCGTCCATCCACAATTGTTCATTCGAGGAGAACATTTCCGATCT AGGCGAGGGACCAACAGTGTCCAATGTCGGCTACATATCGAGCCTCACGG ATAGCACCTTTCTGGACAATGTCTTCAACTGTGATCCGCAGACGTTTCTC GACTTCAACGAGGTTTGTCATGTTATGTTATGATCTGCTTCTTCCATCGT GTTTGCTCGTCAACGTAAGCGCAGTTACTGTATTTGTGTACAATAGTTTT TATTTCGTCGTGGGTGGACATGCTGTTGCATCTAACAAGAACTAGGACAT ATGTCGTGTCTTCTTTACATTATCACCATTCGGAACTACTTCGGTATGGC GCTTATAGCAAATTACCCAAAACACCAGCTATACTATACCGGTACATTGT GTACTTTTCTTTTTTACGATTGCTTTGAATAGTTTGCATGTGGCGAGCAG GAATATGAAACTATTGGTAGTGTAGACGTTGGTTTAGAGGTTGTGACTGA GTAAGTAGGTAGAAAATGTAATCCAGCTTACTCGCTATTTTTCCATCCAC TACATTACCGAGAACAACTTGAATCGCCCACGTGACATTCCTCTTTGAAG TCAAATAATATAATATTGAGTTATATATTAGTGATGTTTACATACTCATA GCCCCACAGGGCGAGTCTCCCAGCCAATCTCCCACGCGTTGCTGCCAAAC TCAATCCCAGTCAGAGGATCTATATGGAACGATCTGCAGCGGCTGCCCTG ACAAGTGCCTCGGGTGCTCATTCGGGAACAACGCGCGGGGAGGTCCAACG TGCACATCTTTGCCGCTGTCCGGAATAGAGCACGCCACGAGTGTTGGGGG TACTGCCACTATCGAGGAACTGTATATTCACAAAGGGTATTGGAGGGCCA CAAATGAGAGTACAGATATAAACAAGTGCTTTAATACTAAGGCATGCTAC GGAGGATTGACGGGCGATCCGGATTACTGTCACCGAGGTTACGAAGGGCC ATGTGAGCGAGGCTCGAGATTGGGCCCGCATGGTCGAACTGTAGCTTGTT TAACGGCGACCCTTTTACACGTTTCTGGTCCCTTGACATAGAAATAATTT GCGACGACAGATACGTTCTGGGGCGTCAAGCTCGATGCAAGCTCTCCGAC GCAATACTTCTCTAACGCGTTTCTTGGCACGTGATGATACATGACGCAAC ACTATACCTAATGTAACGTACGTCGCGATACGTTTGGTCGCAGATTGCTC CGTCTGCAGCAAGAACTACGCTCCAAGTCTGAGTTACACCTGCCGGGAGT GCTCCAACAGCGCCGTGGGCATTGCGATCGCCACAGTTCTTACCCTGTTG GCCACAACTGTCGGAATAGTTATCATCTCGTACCTGTTGTCGGCGGAAAT GATGGGCGCCGGGCGAGGAATCGTGGACCGCTTGACACGTCGGGTGCCAA TGCATTCTGTGAAAATCGTCATCATCGTATGGCAGATCTTGACGCAGGTG AGGCCAACAGTTTTTTTACATATAGATCGATATCGGCTGACTGTCTTTAG TTTTTGTGGGTCGTTGATTCTAGGTTTGATGGGAGTTGGTGACGTATATT TTGGGTACGACGGCTGAAAGCTTCAACGGCCTACCTACGACGCCGGCGTA CTACTGACCGCAGGCGGTACTGATGGCACGTTTGTTAAATGCCTAGATCC GACTATTACAAAAGTACCCTACCTTTGTAGAAAACGTTCCCTGTTTTGAG ACGGCGTCGATCGCACGCTCTCGTGTCTGCCGCGGTTGGCGTTTTGAGAG GGTTGCTTAGGGTGAAAACACAACGCTAACGAGGCGTGGTTGGCGCTTAT GAATATTATACGCTTGGTGTCGACTTGTCATACGGCGTTGATAAAATGAG CGCATGTTAACTTGAATGCGCCTATAGTTGTGATAGCGGCACATCCTCAC TGATAAATCCCGTCCCCCTTTGTTTTCCACGACCCACGCAGTTCGCCTCC GTGGCCAATGTGACCTTTCCGAACATGTATCACAAGTTTCTGGACCGATT GGATATTTTCAATTTTGATTTAAGCTGGGTTATGTCGGTTGGGTGCTTCC TCGACGTTGACTTCCACGACCGGCTGATGTGGACCACTATCACGCCTGTT GTGGCCTTGGTCTTCCTAGGGGGAACGTACGCTGTTGCATTATACAAGTT TCGAGGAAGTACGCAAGTTACCCATGAGAATATTCGACACAAGCATGTGT CAATGACACTGCTGGTTACTTTCCTCGTTTACTCTAGTGTCAGCTCCGTG GTGTTTCAGATGTTTGCCTGCGAACATCTCGATGACGGCAAGCGTTACCT TCTGGCAGATTTCAAAATCGATTGTGACTCTGCTAAACATCGGGCCTTAC AGATCTACGCGGGATTTATGGTTCTTCTGTATCCAGTTGGGATACCAATG TGTTATGCATGGCTGTTATTCAGCAATCGTCGCTTGTTACAAAATGAGAA TTGCCGGATGGAGGCTATTGCAGTCCGATCCACATCAGACCTATGGAAGC CGTACAAGCCTCAAAGGTTCTACTACGAGGTAGTTGAATGCGGCCGTCGA ATCTTGCTTACAGGAGTTGTAGTCTTTATCTACCCTAATTCCGCGTCTCA GATTGCATTTACTCTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig687:205856..208821-

>mRNA_F-serratus_M_contig687.17931.1 ID=mRNA_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig687:205856..208821- (Fucus serratus male)
ATGATGGGCGCCGGGCGAGGAATCGTGGACCGCTTGACACGTCGGGTGCC
AATGCATTCTGTGAAAATCGTCATCATCGTATGGCAGATCTTGACGCAGA
TGATGGGCGCCGGGCGAGGAATCGTGGACCGCTTGACACGTCGGGTGCCA
ATGCATTCTGTGAAAATCGTCATCATCGTATGGCAGATCTTGACGCAGTT
CGCCTCCGTGGCCAATGTGACCTTTCCGAACATGTATCACAAGTTTCTGG
ACCGATTGGATATTTTCAATTTTGATTTAAGCTGGGTTATGTCGGTTGGG
TGCTTCCTCGACGTTGACTTCCACGACCGGCTGATGTGGACCACTATCAC
GCCTGTTGTGGCCTTGGTCTTCCTAGGGGGAACGTACGCTGTTGCATTAT
ACAAGTTTCGAGGAAGTACGCAAGTTACCCATGAGAATATTCGACACAAG
CATGTGTCAATGACACTGCTGGTTACTTTCCTCGTTTACTCTAGTGTCAG
CTCCGTGGTGTTTCAGATGTTTGCCTGCGAACATCTCGATGACGGCAAGC
GTTACCTTCTGGCAGATTTCAAAATCGATTGTGACTCTGCTAAACATCGG
GCCTTACAGATCTACGCGGGATTTATGGTTCTTCTGTATCCAGTTGGGAT
ACCAATGTGTTATGCATGGCTGTTATTCAGCAATCGTCGCTTGTTACAAA
ATGAGAATTGCCGGATGGAGGCTATTGCAGTCCGATCCACATCAGACCTA
TGGAAGCCGTACAAGCCTCAAAGGTTCTACTACGAGGTAGTTGAATGCGG
CCGTCGAATCTTGCTTACAGGAGTTGTAGTCTTTATCTACCCTAATTCCG
CGTCTCAGATTGCATTTACTCTCTTCGCCTCCGTGGCCAATGTGACCTTT
CCGAACATGTATCACAAGTTTCTGGACCGATTGGATATTTTCAATTTTGA
TTTAAGCTGGGTTATGTCGGTTGGGTGCTTCCTCGACGTTGACTTCCACG
ACCGGCTGATGTGGACCACTATCACGCCTGTTGTGGCCTTGGTCTTCCTA
GGGGGAACGTACGCTGTTGCATTATACAAGTTTCGAGGAAGTACGCAAGT
TACCCATGAGAATATTCGACACAAGCATGTGTCAATGACACTGCTGGTTA
CTTTCCTCGTTTACTCTAGTGTCAGCTCCGTGGTGTTTCAGATGTTTGCC
TGCGAACATCTCGATGACGGCAAGCGTTACCTTCTGGCAGATTTCAAAAT
CGATTGTGACTCTGCTAAACATCGGGCCTTACAGATCTACGCGGGATTTA
TGGTTCTTCTGTATCCAGTTGGGATACCAATGTGTTATGCATGGCTGTTA
TTCAGCAATCGTCGCTTGTTACAAAATGAGAATTGCCGGATGGAGGCTAT
TGCAGTCCGATCCACATCAGACCTATGGAAGCCGTACAAGCCTCAAAGGT
TCTACTACGAGGTAGTTGAATGCGGCCGTCGAATCTTGCTTACAGGAGTT
GTAGTCTTTATCTACCCTAATTCCGCGTCTCAGATTGCATTTACTCTC
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