prot_F-serratus_M_contig6822.17881.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6822.17881.1
Unique Nameprot_F-serratus_M_contig6822.17881.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length172
Homology
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A6H5JIN2_9PHAE (Transket_pyr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIN2_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 3.120e-103
Identity = 151/183 (82.51%), Postives = 164/183 (89.62%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRCT GL++QFGPDRVF++ + EQGIAGF IGYASMGKTAIAEIQ           +VNEAAKFRYRSG+QFNCGGLT+RAPCGAVGHGGHYHSQSPE+Y AHTPGLKVVMPRNA EAKGLLLA +REPDPVIF EPKILYRTSVEDVPDGDYEVPLG+ADVMREGTDVTLV
Sbjct:  155 VFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLV 337          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A835ZJS3_9STRA (Thiamine diphosphate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS3_9STRA)

HSP 1 Score: 294 bits (752), Expect = 3.500e-97
Identity = 141/183 (77.05%), Postives = 160/183 (87.43%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRC+ GL+++FG  RVFNTP++EQGIAGF IGYA+MG TAIAE+Q           LVNEAAK+RYRSG++FNCGGLT+RAPCGAVGHGGHYHSQSPEAY AHTPGLKVVMPR+A EAKGLLLA IR+PDPVIFLEPK LYRTSVEDVPDGDYEVPLG+A V+R G DVT+V
Sbjct:   63 VFGEDVAFGGVFRCSVGLKEEFGASRVFNTPLSEQGIAGFAIGYAAMGGTAIAEMQFADYIFPAMDQLVNEAAKYRYRSGNEFNCGGLTIRAPCGAVGHGGHYHSQSPEAYFAHTPGLKVVMPRDAREAKGLLLASIRDPDPVIFLEPKALYRTSVEDVPDGDYEVPLGVAQVLRAGADVTVV 245          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A7S1XVL4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVL4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 8.490e-92
Identity = 132/183 (72.13%), Postives = 156/183 (85.25%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRC+ GLR++FGP+RVFNTP+ EQGIAGF IGYA+MG+TA+AE+Q           +VNEAAK+RYRSG QFNCG LT RAPCGAVGHGGHYHSQSPEAY A TPGLK+VMPR+  EAKGLLLA IR+P+PV+F EPKILYR +VEDVP GDYE+PLG+AD++R GT VT+V
Sbjct:   69 VFGEDVAFGGVFRCSVGLREEFGPERVFNTPLCEQGIAGFAIGYAAMGRTAVAEMQFADYIFPAFDQIVNEAAKYRYRSGAQFNCGSLTFRAPCGAVGHGGHYHSQSPEAYFAGTPGLKIVMPRSPREAKGLLLASIRDPNPVVFFEPKILYRAAVEDVPVGDYEIPLGVADIVRPGTHVTVV 251          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A7S1C9I4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9I4_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.140e-91
Identity = 133/183 (72.68%), Postives = 154/183 (84.15%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            LFGED+AFGGVFRC+  LR++FG DRVFNTP+ EQGIAGF IGYA+MG+TAIAE+Q           +VNEAAK+RYRSGDQ++CG LT+RAP GAVGHGGHYHSQSPEAY AHTPGLKVV  R+  +AKGLLL+CIR+PDP +F EPK LYR SVEDVP GDY +PLG+ADVMREGTD+TLV
Sbjct:   46 LFGEDVAFGGVFRCSVDLREEFGEDRVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDQYDCGPLTIRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVFCRSPKDAKGLLLSCIRDPDPCLFFEPKALYRASVEDVPTGDYTIPLGVADVMREGTDITLV 228          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A2R5GAR1_9STRA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAR1_9STRA)

HSP 1 Score: 274 bits (700), Expect = 7.570e-90
Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            LFGED+AFGGVFRC+ GLRD+FG +RVFNTP+ EQGIAGFGIGYAS G+TAIAE+Q           LVNEAAK RYRSG+QFNCGGLTVRAP GA+GHGGHYHSQSPEAY  HTPGLKVV+PR+  +AKGLLL+CIR+P+P IF EPK LYR SV DVP GDY +PLG A++++ GTDVT+V
Sbjct:   23 LFGEDVAFGGVFRCSMGLRDEFGKNRVFNTPLCEQGIAGFGIGYASTGRTAIAEVQFADYIFPAFDQLVNEAAKMRYRSGNQFNCGGLTVRAPYGAIGHGGHYHSQSPEAYFTHTPGLKVVIPRDPIQAKGLLLSCIRDPNPCIFFEPKALYRGSVGDVPVGDYTIPLGKAEIVQPGTDVTVV 205          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A812TXL3_9DINO (BkdB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TXL3_9DINO)

HSP 1 Score: 273 bits (698), Expect = 5.490e-89
Identity = 125/183 (68.31%), Postives = 157/183 (85.79%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRC+  L+++FGP+RVFNTP+ EQGIAGF IGYA+MG+TAIAE+Q           +VNEAAK+RYRSGD+FNCGGLT R+P GAVGHGGHYHSQSPEAY AHTPGLKVV+PR+ A AKGLLLAC+R+P+P +F EPK LYR +VE+VP+GDY +PLG+A+V+++G D+T+V
Sbjct:   64 VFGEDVAFGGVFRCSVDLKEEFGPERVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDEFNCGGLTFRSPYGAVGHGGHYHSQSPEAYFAHTPGLKVVVPRSPAAAKGLLLACVRDPNPCLFFEPKALYRAAVEEVPEGDYTLPLGVAEVVQKGADITVV 246          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A7S2UTI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTI8_9STRA)

HSP 1 Score: 272 bits (695), Expect = 9.520e-89
Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRC+ GL++QFG  RVFNTP++EQG+AGFGIGYA+MG T IAEIQ           LVNEAAK+RYRSG QF+CGGLTVRAPC AVGHG  YHSQSPE+Y AHTPGLKVV+PR  AEAKGLLL  IR+PDPVIF EPKILYRT+VE+VP+ D+E+ LG ADV+R GTD+TLV
Sbjct:   48 VFGEDVAFGGVFRCSIGLKEQFGAHRVFNTPLSEQGVAGFGIGYAAMGGTCIAEIQFADYIFPAFDQLVNEAAKYRYRSGGQFDCGGLTVRAPCAAVGHGALYHSQSPESYFAHTPGLKVVVPRGPAEAKGLLLKSIRDPDPVIFFEPKILYRTAVEEVPEADFEIELGKADVIRPGTDITLV 230          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A7R9TFB0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFB0_9VIRI)

HSP 1 Score: 271 bits (694), Expect = 2.080e-88
Identity = 135/183 (73.77%), Postives = 151/183 (82.51%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRCTAGL +++G DRVFNTP+ EQGIAGFG+G A+ G TAIAEIQ           LVNEAAK+RYRSG QF+CGGLTVRAPCGAVGHGGHYHSQSPEAY AHTPGL VVMPR   EAKGLLL+ IR  DPVIFLEPK LYRT+V++VP  DYE+PLG ADV+R G DVTLV
Sbjct:   62 VFGEDVAFGGVFRCTAGLGEKYGSDRVFNTPLCEQGIAGFGVGLAAQGHTAIAEIQFADYIFPAFDQLVNEAAKYRYRSGGQFDCGGLTVRAPCGAVGHGGHYHSQSPEAYFAHTPGLVVVMPRGPREAKGLLLSSIRSRDPVIFLEPKALYRTAVDEVPAEDYELPLGQADVVRSGGDVTLV 244          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: A0A1V9YPY9_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY9_9STRA)

HSP 1 Score: 270 bits (689), Expect = 7.970e-88
Identity = 129/183 (70.49%), Postives = 153/183 (83.61%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED+AFGGVFRCT  L+++FG DRVFN+P+ EQGIAGF IGYAS+G+TAIAEIQ           +VNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPEAY AHTPGLKVV+PRN  +AKGLLLA IR+P+PV+F EPK LYR SV DVP GD+E+PLG+AD++R GTDVT++
Sbjct:   50 IFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFELPLGVADIVRPGTDVTVL 232          
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Match: D8TKH8_VOLCA (Transket_pyr domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8TKH8_VOLCA)

HSP 1 Score: 269 bits (687), Expect = 1.330e-87
Identity = 131/183 (71.58%), Postives = 151/183 (82.51%), Query Frame = 0
Query:    1 LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKTAIAEIQ-----------LVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYLAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPDGDYEVPLGIADVMREGTDVTLV 172
            +FGED++FGGVFRCT GL ++FG DRVFNTP++EQGI GFGIG A+MG TA+AEIQ           LVNEAAK+RYRSG  FNCGGLTVRAP GAVGHGGHYHSQSPEA   H PGLKVV+P + AEAKGLLL+ IR PDPV+F EPK++YRT+VEDVP+GDYEVPLG+A V+ EG DVTLV
Sbjct:   43 VFGEDVSFGGVFRCTVGLLERFGKDRVFNTPLSEQGIVGFGIGLAAMGHTAVAEIQFADYIFPAFDQLVNEAAKYRYRSGGTFNCGGLTVRAPYGAVGHGGHYHSQSPEAVFTHVPGLKVVIPSSPAEAKGLLLSSIRAPDPVVFFEPKMMYRTAVEDVPEGDYEVPLGVARVVVEGGDVTLV 225          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6822.17881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIN2_9PHAE3.120e-10382.51Transket_pyr domain-containing protein n=2 Tax=Ect... [more]
A0A835ZJS3_9STRA3.500e-9777.05Thiamine diphosphate-binding protein n=1 Tax=Tribo... [more]
A0A7S1XVL4_9STRA8.490e-9272.13Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1C9I4_9STRA1.140e-9172.68Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5GAR1_9STRA7.570e-9072.13Pyruvate dehydrogenase E1 component subunit beta, ... [more]
A0A812TXL3_9DINO5.490e-8968.31BkdB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S2UTI8_9STRA9.520e-8972.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9TFB0_9VIRI2.080e-8873.77Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A1V9YPY9_9STRA7.970e-8870.492-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
D8TKH8_VOLCA1.330e-8771.58Transket_pyr domain-containing protein n=3 Tax=Vol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 1..143
e-value: 4.0E-37
score: 139.3
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 1..142
e-value: 1.5E-34
score: 119.2
NoneNo IPR availableGENE3D3.40.50.970coord: 1..160
e-value: 2.3E-69
score: 234.4
NoneNo IPR availablePANTHERPTHR42980:SF12-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIALcoord: 1..172
NoneNo IPR availablePANTHERPTHR42980FAMILY NOT NAMEDcoord: 1..172
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 2..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6822contigF-serratus_M_contig6822:5727..7619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6822.17881.1mRNA_F-serratus_M_contig6822.17881.1Fucus serratus malemRNAF-serratus_M_contig6822 5727..7619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6822.17881.1 ID=prot_F-serratus_M_contig6822.17881.1|Name=mRNA_F-serratus_M_contig6822.17881.1|organism=Fucus serratus male|type=polypeptide|length=172bp
LFGEDIAFGGVFRCTAGLRDQFGPDRVFNTPITEQGIAGFGIGYASMGKT
AIAEIQLVNEAAKFRYRSGDQFNCGGLTVRAPCGAVGHGGHYHSQSPEAY
LAHTPGLKVVMPRNAAEAKGLLLACIREPDPVIFLEPKILYRTSVEDVPD
GDYEVPLGIADVMREGTDVTLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR029061THDP-binding