mRNA_F-serratus_M_contig678.17795.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig678.17795.1
Unique NamemRNA_F-serratus_M_contig678.17795.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 409 bits (1052), Expect = 3.150e-125
Identity = 215/440 (48.86%), Postives = 294/440 (66.82%), Query Frame = 1
Query:   10 GPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGD---GAAAAGLPTPEET------------LRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            GPSGLR+S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG  LA++F+P GQYG AV GG E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP  H+ + AA   VT W+Q  +   G++LNR KS+ L   G   +   E+ R  ++ T L V   GMR+VGVP+G   + +    +   G+P +L+K +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D  VE  L +I+ G    G  A   PT E +            +RQA LP+REGGLG+ S+  I G A+IG  ALVL R +
Sbjct: 1177 GPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAFIGGQALVLARAL 1615          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.070e-121
Identity = 210/444 (47.30%), Postives = 276/444 (62.16%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEETLR----------------QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGR 1278
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS+ L  +G+    LT  ++  +  TGL+V   GM +VGVP+GT  FQR F+     G PAEL++ L+ ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D L+ WA++ I+ G  A   G+PT EE                   Q HLPIREGGLG+TSS  I+ +A++   ALV  +
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSK 579          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 4.800e-118
Identity = 209/447 (46.76%), Postives = 280/447 (62.64%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEE----------------TLR-QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT  ++  +   GL+V   GM VVG+P+GT +FQR+F+ +   G PAEL+  LA ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D ++ WA++ I+ G  A +  +PT +E                T R Q HLP+REGGLG+TS+  I+ +A++   ALV  + V
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 2.460e-116
Identity = 209/447 (46.76%), Postives = 280/447 (62.64%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEE----------------TLR-QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT  ++  +   GL+V   GM VVG+P+GT +FQR+F+ +   G PAEL+  LA ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D ++ WA++ I+ G  A +  +PT +E                T R Q HLP+REGGLG+TS+  I+ +A++   ALV  + V
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 3.230e-116
Identity = 198/429 (46.15%), Postives = 262/429 (61.07%), Query Frame = 1
Query:   49 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEET----------------LRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS  L  +G+    LT  ++  +  TGL+V   GM +VGVP+GT  FQR F+     G PAEL+  L+ ++D Q S Q+LR+S   RL HLLRT+ P IT  AA  +D+L+ WA++ I+ G  A   G+PT EE                   Q HLPIREGGLG+TSS  I+ +A++   ALV  + V
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSV 429          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 6.650e-108
Identity = 196/430 (45.58%), Postives = 266/430 (61.86%), Query Frame = 1
Query:   49 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEE----------------TLR-QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            + D   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VLRR+I   F R+Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT  ++  +   GL+V   GM VVG+P+GT +FQR+F+ +   G PAEL+  LA ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D ++ WA++ I+ G  A +  +PT +E                T R Q HLP+REGGLG+TS+  I+ +A++   ALV  + V
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 430          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 5.490e-75
Identity = 134/262 (51.15%), Postives = 171/262 (65.27%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQAL 780
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+GG V GGVEI+A  A L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.750e-66
Identity = 122/279 (43.73%), Postives = 168/279 (60.22%), Query Frame = 1
Query:  493 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEETLR----------------QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRV 1281
            ++ G  E+V S RGVQQGCNLG   +S G L  +KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS+ L  +G     LT  ++  +  TGL+V   GM +VGVP+GT  FQR F+     G PAEL++ L+ ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D L+ WA++ I+ G  A   G+PT EE                   Q HLPIREGGLG+TSS  I+ +A++   ALV  ++
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKI 279          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.660e-51
Identity = 103/248 (41.53%), Postives = 149/248 (60.08%), Query Frame = 1
Query:  592 LKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEE----------------TLR-QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVV 1284
            +KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT  ++  +   GL+V   GM VVG+P GT +FQR+F+ +   G PAEL+  LA ++D QAS Q+LRLS   RL HLLRT+ P IT  AA  +D ++ WA++ I+ G  A +  +PT +E                T R Q HLP+REGGLG+TS+  I+ +A++   ALV  + V
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 248          
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 9.110e-48
Identity = 144/447 (32.21%), Postives = 225/447 (50.34%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAALCDELV-EDLAA-----FATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGGVEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGISLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTGQFQRDF-LKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTVPPPITGQAAANYDALVEWALASIIAGDGAAAA------GLPTPEETLR-----QAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVA 1287
            S AG  G R+SHL++    ++  ED        +  LV      P  FWTL   ++L ALG+K RPV  G   RR+I A   R++  KL + F+   Q+G AV+GGVE +A+ A L  + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y   P   ++ +D G    +E   GVQQG  +GP  +S   + I+ + +      G    +++DDIT+ L     L   ++  +T+ + E L   GI +NR KS AL   G     +T++QR  ++  GLTV  +G+ VVGVPIGT  + R+F +K    G   +L + L  M D Q ++ I  LS   R +++ R + P +T +A    D +V+WAL + +  +G  +       G    +  LR     Q  L    GGLG++S+   + +A +G     L  V+A
Sbjct:  554 SGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHL---KDLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWALETGMGIEGTESEEEFFQQGCQDTDLKLRPYQRAQTQLSTGAGGLGVSSAVMRRFSASLGNLISTLPEVIA 993          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig678.17795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN3.150e-12548.86Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE1.070e-12147.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE4.800e-11846.76Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE2.460e-11646.76Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE3.230e-11646.15Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE6.650e-10845.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE5.490e-7551.15Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE1.750e-6643.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE1.660e-5141.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE9.110e-4832.21Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig678contigF-serratus_M_contig678:413181..414518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.8
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog400682.PAC_15702057
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1287
Cds size1287
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932068.145085-CDS-F-serratus_M_contig678:413180..4143471622932068.145085-CDS-F-serratus_M_contig678:413180..414347Fucus serratus maleCDSF-serratus_M_contig678 413181..414347 +
1690964130.1393964-CDS-F-serratus_M_contig678:413180..4143471690964130.1393964-CDS-F-serratus_M_contig678:413180..414347Fucus serratus maleCDSF-serratus_M_contig678 413181..414347 +
1622932068.1605263-CDS-F-serratus_M_contig678:414398..4145181622932068.1605263-CDS-F-serratus_M_contig678:414398..414518Fucus serratus maleCDSF-serratus_M_contig678 414399..414518 +
1690964130.1505668-CDS-F-serratus_M_contig678:414398..4145181690964130.1505668-CDS-F-serratus_M_contig678:414398..414518Fucus serratus maleCDSF-serratus_M_contig678 414399..414518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig678.17795.1prot_F-serratus_M_contig678.17795.1Fucus serratus malepolypeptideF-serratus_M_contig678 413181..414518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig678.17795.1

>prot_F-serratus_M_contig678.17795.1 ID=prot_F-serratus_M_contig678.17795.1|Name=mRNA_F-serratus_M_contig678.17795.1|organism=Fucus serratus male|type=polypeptide|length=429bp
SAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSAN
LSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGGAVSGG
VEIMALAATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYA
SNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKE
FRANPPVPGARAVSFIDDITVILPPEHSLDVAAIGKVTEWLQERLGMEGI
SLNRRKSQALLADGVGPEQLTERQRVAMDTTGLTVVRQGMRVVGVPIGTG
QFQRDFLKEAVNGKPAELVKALAPMEDAQASSQILRLSATSRLSHLLRTV
PPPITGQAAANYDALVEWALASIIAGDGAAAAGLPTPEETLRQAHLPIRE
GGLGLTSSSSIKGAAYIGCHALVLGRVVA
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mRNA from alignment at F-serratus_M_contig678:413181..414518+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig678.17795.1 ID=mRNA_F-serratus_M_contig678.17795.1|Name=mRNA_F-serratus_M_contig678.17795.1|organism=Fucus serratus male|type=mRNA|length=1338bp|location=Sequence derived from alignment at F-serratus_M_contig678:413181..414518+ (Fucus serratus male)
AGCGCGGCAGGTCCGTCTGGACTACGCTACAGTCATCTGCAGGCTGCGCT GTGCGATGAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCTTGTTTTTT CCAGCCGTGTTTTGCCTCAAGTGTTCTGGACACTGCACACGAGCGCTAAC CTTTCCGCATTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGCGATGTCCT GCGGAGAGTAATTGGTGCTGTTTTCTGCCGCCGATACGGCAGAAAGCTGG CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGGAGCAGTTTCAGGCGGA GTAGAGATAATGGCGCTCGCTGCAACACTGGGTTTCGAAGAGGGTTGTAC CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA GGTTCCTGCCCGCGCTAGCGGAAATTGTCCCCTCAGTGGTCCCCTACGCA TCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCTCTCGATGG TGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTA ATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAA TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA CGACATCACGGTCATTCTACCACCGGAACACTCTCTCGATGTGGCAGCTA TAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATGGAAGGTATC TCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCC AGAACAACTGACGGAAAGGCAGCGAGTGGCAATGGATACCACAGGGCTCA CGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAATTGGAACAGGA CAGTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAAAGCCAGCTGA GCTCGTGAAGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTCTCAGA TTTTGCGTCTGTCCGCCACTTCTCGTCTCTCACATCTACTCCGAACAGTC CCGCCCCCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGA GTGGGCGCTGGCGTCTATCATAGCTGGTGACGGAGCTGCCGCGGCAGGGC TACCAACGCCAGAGGAAGTAGCCCACGATCCCACTGTGTGCCAAAATCAT ACCTACCTGGGGCACGAGACCCTACGACAGGCCCACCTGCCAATCCGAGA AGGCGGCCTTGGACTTACCAGCAGTAGCTCCATCAAAGGCGCGGCATATA TCGGCTGTCATGCCCTGGTTCTGGGGCGCGTCGTCGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig678:413181..414518+

>mRNA_F-serratus_M_contig678.17795.1 ID=mRNA_F-serratus_M_contig678.17795.1|Name=mRNA_F-serratus_M_contig678.17795.1|organism=Fucus serratus male|type=CDS|length=2574bp|location=Sequence derived from alignment at F-serratus_M_contig678:413181..414518+ (Fucus serratus male)
AGCGCGGCAGGTCCGTCTGGACTACGCTACAGTCATCTGCAGGCTGCGCT
GTGCGATGAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCTTGTTTTTT
CCAGCCGTGTTTTGCCTCAAGTGTTCTGGACACTGCACACGAGCGCTAAC
CTTTCCGCATTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGCGATGTCCT
GCGGAGAGTAATTGGTGCTGTTTTCTGCCGCCGATACGGCAGAAAGCTGG
CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGGAGCAGTTTCAGGCGGA
GTAGAGATAATGGCGCTCGCTGCAACACTGGGTTTCGAAGAGGGTTGTAC
CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA
GGTTCCTGCCCGCGCTAGCGGAAATTGTCCCCTCAGTGGTCCCCTACGCA
TCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCTCTCGATGG
TGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTA
ATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAA
TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA
CGACATCACGGTCATTCTACCACCGGAACACTCTCTCGATGTGGCAGCTA
TAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATGGAAGGTATC
TCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCC
AGAACAACTGACGGAAAGGCAGCGAGTGGCAATGGATACCACAGGGCTCA
CGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAATTGGAACAGGA
CAGTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAAAGCCAGCTGA
GCTCGTGAAGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTCTCAGA
TTTTGCGTCTGTCCGCCACTTCTCGTCTCTCACATCTACTCCGAACAGTC
CCGCCCCCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGA
GTGGGCGCTGGCGTCTATCATAGCTGGTGACGGAGCTGCCGCGGCAGGGC
TACCAACGCCAGAGGAAAGCGCGGCAGGTCCGTCTGGACTACGCTACAGT
CATCTGCAGGCTGCGCTGTGCGATGAACTGGTTGAGGATCTCGCGGCGTT
CGCGACGCTTGTTTTTTCCAGCCGTGTTTTGCCTCAAGTGTTCTGGACAC
TGCACACGAGCGCTAACCTTTCCGCATTGGGGCAAAAGGCGAGACCAGTG
GCGTGCGGCGATGTCCTGCGGAGAGTAATTGGTGCTGTTTTCTGCCGCCG
ATACGGCAGAAAGCTGGCAGACTACTTCCAGCCCTGGGGCCAGTACGGCG
GAGCAGTTTCAGGCGGAGTAGAGATAATGGCGCTCGCTGCAACACTGGGT
TTCGAAGAGGGTTGTACCATTCTCTCATACGACGGAGCAAACGCCTTCAA
CAGTATATACCGCCACAGGTTCCTGCCCGCGCTAGCGGAAATTGTCCCCT
CAGTGGTCCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTC
CTGTTTGCTCTCGATGGTGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGG
AGTACAGCAAGGATGTAATCTAGGTCCACTTTGCTACAGCGCAGGCTCAC
TGAAGATCCTAAAAGAATTCAGGGCCAACCCACCGGTGCCAGGAGCGAGA
GCGGTTTCGTTCATCGACGACATCACGGTCATTCTACCACCGGAACACTC
TCTCGATGTGGCAGCTATAGGGAAAGTTACGGAATGGCTACAGGAGCGCC
TGGGGATGGAAGGTATCTCGCTGAACCGAAGGAAATCGCAGGCCCTGCTG
GCAGATGGAGTGGGGCCAGAACAACTGACGGAAAGGCAGCGAGTGGCAAT
GGATACCACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGGGAG
TACCAATTGGAACAGGACAGTTCCAGCGTGATTTCTTAAAGGAGGCGGTT
AATGGAAAGCCAGCTGAGCTCGTGAAGGCGCTGGCCCCAATGGAGGATGC
CCAAGCGAGCTCTCAGATTTTGCGTCTGTCCGCCACTTCTCGTCTCTCAC
ATCTACTCCGAACAGTCCCGCCCCCCATCACAGGCCAAGCTGCAGCAAAT
TATGACGCTTTGGTGGAGTGGGCGCTGGCGTCTATCATAGCTGGTGACGG
AGCTGCCGCGGCAGGGCTACCAACGCCAGAGGAAACCCTACGACAGGCCC
ACCTGCCAATCCGAGAAGGCGGCCTTGGACTTACCAGCAGTAGCTCCATC
AAAGGCGCGGCATATATCGGCTGTCATGCCCTGGTTCTGGGGCGCGTCGT
CGCTACCCTACGACAGGCCCACCTGCCAATCCGAGAAGGCGGCCTTGGAC
TTACCAGCAGTAGCTCCATCAAAGGCGCGGCATATATCGGCTGTCATGCC
CTGGTTCTGGGGCGCGTCGTCGCT
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