prot_F-serratus_M_contig6742.17765.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6742.17765.1
Unique Nameprot_F-serratus_M_contig6742.17765.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length403
Homology
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BLAST of mRNA_F-serratus_M_contig6742.17765.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.970e-87
Identity = 177/318 (55.66%), Postives = 210/318 (66.04%), Query Frame = 0 
Query:   73 GPPPIVSLDEMARADAAEKKRKGKARPAGKRVGWVDRAGKILQIVKEFHPEDAALVVSEELQEETPGANEAXXXXXXXXXXXXKHWAERVKREREMERKFHGKSGGRIR-RTHEGSGTGGEDEGAGTGARGVELAAAS--------RRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAEGQTARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXXXXXXXXXXRLTYEQMKALETALATVDPHAAAALRSRFSQEPRLLQALLVTEGQVNTVLLR 381
            GPPPIVSLDEMARA++ EKKR  KA+PAGK+VGW DRAG+ LQ+VKEFH EDAA  VSE  QE    ++              +HWAERVKREREMERKFHGKSGGR + ++  G  + G++E                       +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEAE Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                        ++T +Q++AL+ ALA+VDPHAA ALRSRF+ EPRLL ALL  EG+VN  LLR
Sbjct:  566 GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQE----SDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEALKEQQQQQAPANQPGPV------KVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLR 871
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BLAST of mRNA_F-serratus_M_contig6742.17765.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 6.710e-83
Identity = 174/341 (51.03%), Postives = 202/341 (59.24%), Query Frame = 0 
Query:   73 GPPPIVSLDEMARADAAEKKRKGKARPAGKRVGWVDRAGKILQ---------------------IVKEFHPEDAALVVSEELQEETPGANEAXXXXXXXXXXXXKHWAERVKREREMERKFHGKSGGRIRRTHEGSGTGGEDEGAGTGARGVELAAA-----------SRRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAEGQTARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXXXXXXXXXXRLTYEQMKALETALATVDPHAAAALRSRFSQEPRLLQALLVTEGQVNTVLLR 381
            GPPPIVSLDEMARA++ EKKR  KA+PAGK+VGW DRAG+ LQ                     +VKEFH EDAA  VSE  QE    ++              +HWAERVKREREMERKFHGKSGGR +                                       +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEAE Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                        ++T +Q++AL+ ALA+VDPHAA ALRSRF+ EPRLL ALL  EG+VN  LLR
Sbjct:  334 GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQE----SDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPV------KVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLR 662
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6742.17765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE1.970e-8755.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI6.710e-8351.03TFIIS N-terminal domain-containing protein (Fragme... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6742contigF-serratus_M_contig6742:13906..19496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6742.17765.1mRNA_F-serratus_M_contig6742.17765.1Fucus serratus malemRNAF-serratus_M_contig6742 13820..20590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6742.17765.1 ID=prot_F-serratus_M_contig6742.17765.1|Name=mRNA_F-serratus_M_contig6742.17765.1|organism=Fucus serratus male|type=polypeptide|length=403bp
MPAQAPASVTVTTTATVAPASKVADSETGPGEAVSLVATAPALAKAPAPA
SAEGSSNVAIPAGGGVSVQSSPGPPPIVSLDEMARADAAEKKRKGKARPA
GKRVGWVDRAGKILQIVKEFHPEDAALVVSEELQEETPGANEAAALLQHQ
QHHHHKHWAERVKREREMERKFHGKSGGRIRRTHEGSGTGGEDEGAGTGA
RGVELAAASRRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAEGQTA
RTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELE
QMQADQKQEKEQQLQEKERQQNSPSPPPPRLTYEQMKALETALATVDPHA
AAALRSRFSQEPRLLQALLVTEGQVNTVLLRWVAFDIILLFGGKCICMCV
CL*
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